Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000670-TA|BGIBMGA000670-PA|IPR001628|Nuclear hormone
receptor, DNA-binding, IPR000324|Vitamin D receptor
(302 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 120 1e-29
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 120 1e-29
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 99 2e-23
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 95 5e-22
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 69 5e-14
AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced prot... 48 8e-08
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 48 1e-07
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 5.8
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 22 7.7
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 120 bits (290), Expect = 1e-29
Identities = 46/75 (61%), Positives = 61/75 (81%)
Query: 12 CRVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLDYVCKESGRCIVDVTRRNQCQACRFSK 71
C +CGD+ASGKHYGV SC+GC+GFFKR++R++L Y C+E CI+D +RN+CQ CR+ K
Sbjct: 110 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQYCRYQK 169
Query: 72 CLRVNMKKEAVQHER 86
CL + MK+EAVQ ER
Sbjct: 170 CLAMGMKREAVQEER 184
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 120 bits (290), Expect = 1e-29
Identities = 46/75 (61%), Positives = 61/75 (81%)
Query: 12 CRVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLDYVCKESGRCIVDVTRRNQCQACRFSK 71
C +CGD+ASGKHYGV SC+GC+GFFKR++R++L Y C+E CI+D +RN+CQ CR+ K
Sbjct: 110 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQYCRYQK 169
Query: 72 CLRVNMKKEAVQHER 86
CL + MK+EAVQ ER
Sbjct: 170 CLAMGMKREAVQEER 184
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 99 bits (238), Expect = 2e-23
Identities = 41/79 (51%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 12 CRVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLDY-VCKESGRCIVDVTRRNQCQACRFS 70
CRVCGDKASG HYGV SC+GC+GFF+RSI++ + Y C ++ +C + RN+CQ CR
Sbjct: 67 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 126
Query: 71 KCLRVNMKKEAVQHERAPR 89
KC+ V M ++AV+ R P+
Sbjct: 127 KCIAVGMSRDAVRFGRVPK 145
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 95.5 bits (227), Expect = 5e-22
Identities = 39/77 (50%), Positives = 49/77 (63%)
Query: 9 EAFCRVCGDKASGKHYGVPSCDGCRGFFKRSIRRNLDYVCKESGRCIVDVTRRNQCQACR 68
E C VCGD+ASG HY +C+GC+GFF+RSI +N Y CK C +D+ R +CQ CR
Sbjct: 184 EELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECR 243
Query: 69 FSKCLRVNMKKEAVQHE 85
KCL V M+ E V E
Sbjct: 244 LKKCLTVGMRPECVVPE 260
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 68.9 bits (161), Expect = 5e-14
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 29 CDGCRGFFKRSIRRNLDYVCKESGRCIVDVTRRNQCQACRFSKCLRVNMKKEAVQHE 85
C+GC+GFF+RSI +N Y CK C +D+ R +CQ CR KCL V M+ E + E
Sbjct: 1 CEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECMVPE 57
>AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced
protein 75 protein.
Length = 30
Score = 48.4 bits (110), Expect = 8e-08
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 12 CRVCGDKASGKHYGVPSCDGCR 33
CRVCGDKASG HYGV SC+GC+
Sbjct: 9 CRVCGDKASGFHYGVHSCEGCK 30
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced
protein 75 protein.
Length = 87
Score = 48.0 bits (109), Expect = 1e-07
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 33 RGFFKRSIRRNLDY-VCKESGRCIVDVTRRNQCQACRFSKCLRVNMKKE 80
+GFF+RSI++ + Y C ++ +C + RN+CQ CR KC+ V M ++
Sbjct: 39 QGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRD 87
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 5.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 241 HFINIIKYVEF 251
HF N+IKY+ F
Sbjct: 2 HFNNVIKYINF 12
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.8 bits (44), Expect = 7.7
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 10 AFCRVCGDKASGKHYGVPSCDGC 32
++C CGD YG+ C
Sbjct: 34 SYCLGCGDSCHKCKYGIAMSSAC 56
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.322 0.136 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,907
Number of Sequences: 429
Number of extensions: 3943
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 9
length of query: 302
length of database: 140,377
effective HSP length: 57
effective length of query: 245
effective length of database: 115,924
effective search space: 28401380
effective search space used: 28401380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)
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