Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000669-TA|BGIBMGA000669-PA|IPR000980|SH2 motif
(644 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56660.1 68414.m06516 expressed protein 39 0.009
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 38 0.021
At5g41020.1 68418.m04986 myb family transcription factor contain... 36 0.063
At5g14340.1 68418.m01676 myb family transcription factor (MYB40)... 36 0.063
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 36 0.083
At1g06150.1 68414.m00646 pentatricopeptide (PPR) repeat-containi... 34 0.33
At5g54410.1 68418.m06777 hypothetical protein 33 0.44
At5g16500.1 68418.m01928 protein kinase family protein contains ... 33 0.59
At4g31880.1 68417.m04531 expressed protein 33 0.77
At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein... 33 0.77
At4g02720.1 68417.m00368 expressed protein temporary automated f... 33 0.77
At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3 d... 33 0.77
At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containi... 33 0.77
At3g28770.1 68416.m03591 expressed protein 33 0.77
At2g22795.1 68415.m02704 expressed protein 33 0.77
At1g08560.1 68414.m00949 syntaxin-related protein KNOLLE (KN) / ... 32 1.4
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 31 1.8
At4g18780.1 68417.m02774 cellulose synthase, catalytic subunit (... 31 2.4
At1g05960.1 68414.m00625 expressed protein similar to hypothetic... 31 2.4
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 31 3.1
At4g29940.1 68417.m04259 pathogenesis-related homeodomain protei... 30 4.1
At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /... 30 4.1
At1g20670.1 68414.m02589 DNA-binding bromodomain-containing prot... 30 4.1
At1g17690.1 68414.m02190 expressed protein 30 4.1
At5g51850.1 68418.m06428 expressed protein similar to unknown pr... 30 5.5
At5g42400.1 68418.m05162 SET domain-containing protein (TXR7) co... 30 5.5
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 30 5.5
At5g28646.1 68418.m03507 wave-dampened2 (WVD2) nearly identical ... 30 5.5
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 30 5.5
At3g59800.1 68416.m06673 expressed protein 30 5.5
At2g39320.1 68415.m04827 OTU-like cysteine protease family prote... 30 5.5
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 30 5.5
At1g52670.1 68414.m05947 biotin/lipoyl attachment domain-contain... 30 5.5
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 29 7.2
At5g46795.1 68418.m05765 expressed protein 29 7.2
At4g35880.1 68417.m05095 aspartyl protease family protein contai... 29 7.2
At4g32610.1 68417.m04643 mitochondrial glycoprotein family prote... 29 7.2
At4g26190.1 68417.m03770 expressed protein 29 7.2
At3g08670.1 68416.m01007 expressed protein 29 7.2
At1g56290.1 68414.m06471 CwfJ-like family protein contains Pfam ... 29 7.2
At5g38840.1 68418.m04698 forkhead-associated domain-containing p... 29 9.5
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 29 9.5
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 29 9.5
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 29 9.5
At1g52450.1 68414.m05921 ubiquitin carboxyl-terminal hydrolase-r... 29 9.5
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 39.1 bits (87), Expect = 0.009
Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 7/145 (4%)
Query: 279 EKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDS 338
EK+ KA + +H+++ ++ L K+N + +S ++ K S +
Sbjct: 148 EKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSN 207
Query: 339 ECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSND-PYNQRKSTKNSCGT 397
E + +K G +D H ++++ K D N++K SC
Sbjct: 208 EDKKVKGKKEK------GEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAE 261
Query: 398 NMKSKKQKDNLAKDIEVDKTEKPTK 422
K K K+ KD +K +K K
Sbjct: 262 EKKKKPDKEKKEKDESTEKEDKKLK 286
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 37.9 bits (84), Expect = 0.021
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 5/144 (3%)
Query: 268 SQNTSIPHASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKY 327
+Q + + S++K ++ E + + ++S KRN E DSL +T ++
Sbjct: 206 NQLAGVDNVSLQKDSTRQKQNAVNESEHQIQQCATTSTKRNEEEKTDDSLDVTSSTVKTT 265
Query: 328 LHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQ 387
HT S D N K S G V K S + S+++S S P +
Sbjct: 266 QHTRRLSVQDR--INLFENKQKENSPSGGSKPVAVTK---STELRRLSSDVSSSEKPILR 320
Query: 388 RKSTKNSCGTNMKSKKQKDNLAKD 411
R S + T++ S+K+ ++ +D
Sbjct: 321 RSSIVSDMSTDLASEKKLESFPED 344
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 36.3 bits (80), Expect = 0.063
Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 7/169 (4%)
Query: 268 SQNTSIPHASIEKHHKAK-ESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRK 326
+++ + S EK + K +S H +K K+ S +++E+ T+S +++ ++ K
Sbjct: 109 AEDDGVEKKSKEKSKETKVDSEAHDGVKRKKKKSKKES-GGDVIEN-TESSKVSDKKKGK 166
Query: 327 YLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSN--MFHKDSNEISKSNDP 384
++ V RKNN SV + +N D+ ++ K + S
Sbjct: 167 RKRDDTDLGAEENIDKEVKRKNNKKKPSVDSDVEDINLDSTNDGKKKRKKKKQSEDSETE 226
Query: 385 YNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPK 433
N STK++ K KK+K + + E +K++K + ++ + P+ K
Sbjct: 227 ENGLNSTKDAKKRRKKKKKKKQSEVSEAE-EKSDK-SDEDLTTPSTSSK 273
>At5g14340.1 68418.m01676 myb family transcription factor (MYB40)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 263
Score = 36.3 bits (80), Expect = 0.063
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 314 TDSLQLTLREMRKYLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHK 373
TD+ + + E+ L +S + T + N T + KH+ D + HK
Sbjct: 71 TDAEEDRIMELHSQLGNRWSKIASHFSGRTDNEIKNHWNTKIKKKMKHLGLDPAT---HK 127
Query: 374 DSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEK 419
N+I+ DP +K N C T + ++ KD KD + +T K
Sbjct: 128 PMNDITHQTDPNQDKK--PNMCSTINEGEEIKDQTPKDDVITETTK 171
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 35.9 bits (79), Expect = 0.083
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 269 QNTSIPHASIEKH-HKAKESVRHKEIKIKRHSLPSSS-YKR-NIVESDTDSLQLTLREMR 325
Q S+ + +K H A+E + E+ + S S+ Y R + D+ SL +L+E+
Sbjct: 219 QRKSLEYTIYDKELHDAREKLEQVEVARTKASEESTKMYDRVEKAQDDSKSLDESLKELT 278
Query: 326 KYLHTLYSSSSDSECRNTVSRKNNT 350
K L TLY E + T + K T
Sbjct: 279 KELQTLYKEKETVEAQQTKALKKKT 303
>At1g06150.1 68414.m00646 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1322
Score = 33.9 bits (74), Expect = 0.33
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 294 KIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDSECRNTVSRKNNTVIT 353
K K+ + P S + D +Q ++E+R+ + S DS T+ K+ +
Sbjct: 547 KNKKRAKPGESSRPR--PRDRQLIQDRIKELRELVPNGSKCSIDSLLECTI--KHMLFLQ 602
Query: 354 SVGVHAKHVNKDANSNMFHKDSNEISKSN 382
SV HA + K A+S M HKD+ + S+
Sbjct: 603 SVSQHADKLTKSASSKMQHKDTGTLGISS 631
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 33.5 bits (73), Expect = 0.44
Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 302 SSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKH 361
+SS IV++ +++ +++R+ TL S+ ++ T RK N K
Sbjct: 20 NSSADDKIVQALAEAIDAANKKLRE--ETLQSNEEANDAMETFRRKTNEQKRLENEKRKQ 77
Query: 362 VNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPT 421
KDA KD +++ N+ K T+ K + + KD+ +K + PT
Sbjct: 78 ALKDA------KDLKDLTYKTKVENKLKKTQ-------PEKDRAEEEEKDLTEEKKKDPT 124
Query: 422 KKNASNPTQKPK 433
++ +PT++ K
Sbjct: 125 EEEEKDPTEEKK 136
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 33.1 bits (72), Expect = 0.59
Identities = 32/180 (17%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 268 SQNTSIPHASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKY 327
++++S + E+ K +++ + +E K+ + + ESD++S + E +
Sbjct: 398 NKSSSSSDSEDEEEEKEQKAEKEEESTSKKRQEQEETATDSDDESDSNSEKDQEEEQSQL 457
Query: 328 LHTLYSSSSDSEC---RNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDP 384
SSSS S+ R ++ N T + ++ + +++ ++ S+ S
Sbjct: 458 EKARESSSSSSDSGSERRSIDETNATAQSLKISYSNYSSEEEDNEKLSSKSSCKSNEEST 517
Query: 385 YNQRKSTKNSCGTNMKSKKQKDNLA-KDIEVDKTEKPTKKNASNPTQKPKMSTVRILSIN 443
+++ S ++ ++ + + ++LA D E D+ E ++ S+ P+ +++RI S++
Sbjct: 518 FSRYDSGRDHDDSSRNTSMRINSLAHDDKEEDEEENHETRSYSDHDDSPRNTSMRINSLS 577
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 32.7 bits (71), Expect = 0.77
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 11/181 (6%)
Query: 268 SQNTSIPHASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKY 327
++++S+ A + K KE E+ + L S V+S + + E K
Sbjct: 364 NESSSVKQADLSKDSDIKEETEPAELLDSKDVLTSPP-----VDSSVTAATSSENEKNKS 418
Query: 328 LHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQ 387
+ L S +S E N S + V K AN + E+ S +
Sbjct: 419 VQILPSKTSGDETANVSSPSMAEELPEQSVP----KKTANQKKKESSTEEVKPSASIATE 474
Query: 388 RKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMSTVRIL-SINLKQ 446
S + + +KK +A + T P+KK+ S T+ K S +++ S N ++
Sbjct: 475 EVSEEPNTSEPQVTKKSGKKVASSSKTKPTVPPSKKSTSE-TKVAKQSEKKVVGSDNAQE 533
Query: 447 S 447
S
Sbjct: 534 S 534
>At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 595
Score = 32.7 bits (71), Expect = 0.77
Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 2/145 (1%)
Query: 275 HASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSS 334
++S +K + H+E K + P S + S++ +Q +E R
Sbjct: 443 NSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYV 502
Query: 335 SSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNS 394
+SE RN +K H + V ++ S++ + +D Y K T++
Sbjct: 503 DMESENRNRSEKKPRYDDRDSEKHHRSVK--GKEKHVYEASDDPEEFSDRYRSTKKTESD 560
Query: 395 CGTNMKSKKQKDNLAKDIEVDKTEK 419
+N +S+K+K L+ + E ++ K
Sbjct: 561 SESNRRSRKKKHELSSEEEEGESRK 585
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 32.7 bits (71), Expect = 0.77
Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 12/161 (7%)
Query: 277 SIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSS 336
S + +++ S E + +R SSS ++ S + + + R KY + SS
Sbjct: 130 SYDSDSESEGSESDSEEEDRRRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDE 189
Query: 337 DSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCG 396
DS+ + S T + + K S++ S + KS +S G
Sbjct: 190 DSKAEISASSSGEEEDTK------------SKSKRRKKSSDSSSKRSKGEKTKSGSDSDG 237
Query: 397 TNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMSTV 437
T SK Q D K+ E++ E+ KK K K S V
Sbjct: 238 TEEDSKMQVDETVKNTELELDEEELKKFKEMIELKKKSSAV 278
>At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3
domain-containing protein similar to eukaryotic protein
synthesis initiation factor [Homo sapiens] GI:3941724;
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 1544
Score = 32.7 bits (71), Expect = 0.77
Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 361 HVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKP 420
H++ D+ S++ +++ + S P N + S K + G + K KD ++ + ++K
Sbjct: 308 HLSSDSTSSVKARNAQNVMSSALPVNAKVSVKPA-GVSEKLGSPKDRSHGEVNISLSQKN 366
Query: 421 TKKNASNPTQKPKMSTV 437
+ + + +Q+PK S V
Sbjct: 367 VEACSLSSSQQPKPSFV 383
>At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1184
Score = 32.7 bits (71), Expect = 0.77
Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 2/142 (1%)
Query: 296 KRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDSECRNTVSRKNNTVITSV 355
K H + SY +++E D T ++ K L+ LY+ + +E V + + S
Sbjct: 534 KGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMSF 593
Query: 356 GVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVD 415
++ K +D K + E K + + K + ++S+ LA+D
Sbjct: 594 KMYKKKGEEDLIEKAKPKGNKEGKKKGTDHQRYKGRVSLARNRLRSETPSSFLARDRLRS 653
Query: 416 KTEKPTKKNASNPTQKPKMSTV 437
KT P+ S+ PK S +
Sbjct: 654 KT--PSSSPFSSKRHTPKTSEI 673
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 32.7 bits (71), Expect = 0.77
Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 306 KRNIVESDTDSLQLTLREMRKYLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKD 365
K+ ES +++ + ++Y++ D++ + T +N+ + K NKD
Sbjct: 945 KKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNK-KETTKSENSKL--------KEENKD 995
Query: 366 ANSNMFHKDSNEISKSNDPYNQRKS-TKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKN 424
+DS ++ Y ++KS TK K + K KD E K++K +++
Sbjct: 996 NKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEES 1055
Query: 425 ASNPTQKPKMST 436
+K + T
Sbjct: 1056 RDLKAKKKEEET 1067
Score = 31.5 bits (68), Expect = 1.8
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 24/177 (13%)
Query: 277 SIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSS 336
S+E +ES++ K +++R+ S+ R+ + +Q E KY +
Sbjct: 866 SVEVKANKEESMKKKREEVQRNDKSSTKEVRDFANNMDIDVQKGSGESVKYKKDEKKEGN 925
Query: 337 DSECRNTVSRKNNTVITSVGVHAKHVNKDA-NSNMFHKD-------SNEISKSNDPYNQR 388
E ++T+ NT G K K++ NSNM K+ +NE+ K D +
Sbjct: 926 KEENKDTI----NTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKET 981
Query: 389 KSTKNSC-----GTNMKSKKQKDNLAKDIEV-------DKTEKPTKKNASNPTQKPK 433
++NS N + K+ +D+ +K+ E KT++ KK K +
Sbjct: 982 TKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKR 1038
Score = 31.5 bits (68), Expect = 1.8
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 339 ECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTN 398
E +N+ +K + H K V K+++ K NE KS KN +
Sbjct: 1124 EDQNSNKKKEDKNEKKKSQHVKLVKKESDKK--EKKENEEKSETKEIESSKSQKNE--VD 1179
Query: 399 MKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMSTV 437
K KK + K E + E KK N + K ++V
Sbjct: 1180 KKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSV 1218
Score = 30.3 bits (65), Expect = 4.1
Identities = 36/169 (21%), Positives = 56/169 (33%), Gaps = 10/169 (5%)
Query: 270 NTSIPHASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYL- 328
NTS +K K KES K +K+ Y N ++ D+ + T + L
Sbjct: 934 NTSSKQKGKDKKKKKKES---KNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLK 990
Query: 329 -----HTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDA-NSNMFHKDSNEISKSN 382
+ S DS +N ++ + AK K + + KDS E
Sbjct: 991 EENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKK 1050
Query: 383 DPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQK 431
+ R K KK+ +N + DK E K+ K
Sbjct: 1051 EKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDK 1099
Score = 29.1 bits (62), Expect = 9.5
Identities = 29/163 (17%), Positives = 66/163 (40%), Gaps = 3/163 (1%)
Query: 269 QNTSIPHASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYL 328
Q SI + IEK+ ++KE V+ E++ +++ SS + E+ ++ T M
Sbjct: 338 QGESIEDSDIEKNLESKEDVK-SEVEAAKNA--GSSMTGKLEEAQRNNGVSTNETMNSEN 394
Query: 329 HTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQR 388
S++D T + +++ H + N+ +K NE S + +
Sbjct: 395 KGSGESTNDKMVNATTNDEDHKKENKEETHENNGESVKGENLENKAGNEESMKGENLENK 454
Query: 389 KSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQK 431
+ G K + +K+ + +++++ + + T K
Sbjct: 455 VGNEELKGNASVEAKTNNESSKEEKREESQRSNEVYMNKETTK 497
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 32.7 bits (71), Expect = 0.77
Identities = 30/161 (18%), Positives = 66/161 (40%), Gaps = 9/161 (5%)
Query: 279 EKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDS 338
++ ++E KE + K + SSS ++N + +T+ ++ + E K +S
Sbjct: 457 KEESSSQEETMDKETEAKE-KVESSSQEKN-EDKETEKIESSFLEETKEKEDETKEKEES 514
Query: 339 ECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKD---SNEISKSNDPYNQRKSTKNSC 395
+ K + ++ KD + K+ S E SK N+ + K +S
Sbjct: 515 SSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSS- 573
Query: 396 GTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMST 436
+ K+K+N + E ++ TK+ + +K + ++
Sbjct: 574 ---QEETKEKENEKIEKEESAPQEETKEKENEKIEKEESAS 611
>At1g08560.1 68414.m00949 syntaxin-related protein KNOLLE (KN) /
syntaxin 111 (SYP111) identical to SP|Q42374
Syntaxin-related protein KNOLLE (Syntaxin 111)
(AtSYP111) {Arabidopsis thaliana}; BAC F22O13 has a
deletion of a cytosine at position 7887
Length = 310
Score = 31.9 bits (69), Expect = 1.4
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 366 ANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNA 425
A +H++S + K+ + R N + ++ K K +K E+DK K K+ +
Sbjct: 67 ARIEQYHEESKGVHKAESVKSLRNKISNEIVSGLR--KAKSIKSKLEEMDKANKEIKRLS 124
Query: 426 SNPTQKPKMSTVRILSINLKQSFCNLFRWRRQPVVDNVTE-VER 468
P + + + L LK+ F+ RQ ++ E VER
Sbjct: 125 GTPVYRSRTAVTNGLRKKLKEVMME-FQGLRQKMMSEYKETVER 167
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/124 (19%), Positives = 47/124 (37%)
Query: 280 KHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDSE 339
+H +A+ S + K + + S KR +R RK SSD
Sbjct: 774 RHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDS 833
Query: 340 CRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNM 399
R + S++ N + +HV+ + + + N + S+D ++S S +
Sbjct: 834 KRKSSSKRKNRSPSPGKSRRRHVSSRSPHSKHSQHKNTLYSSHDKSRSKRSRSRSRSPHR 893
Query: 400 KSKK 403
+ +K
Sbjct: 894 RHRK 897
>At4g18780.1 68417.m02774 cellulose synthase, catalytic subunit
(IRX1) nearly identical to gi:12836997
Length = 985
Score = 31.1 bits (67), Expect = 2.4
Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query: 338 SECRNTVSRKNNTVITSVGVHAKHVN--KDANSNMFHKDSNEISKSN-DPYNQRKSTKNS 394
S+ ++ V + N G+HA+H++ +S + + N I K+ + + +K K+
Sbjct: 71 SKTQSIVPTQTNNTSQDSGIHARHISTVSTIDSELNDEYGNPIWKNRVESWKDKKDKKS- 129
Query: 395 CGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMSTVRILSI 442
KK+KD A E + + PT+++ + + +LS+
Sbjct: 130 ------KKKKKDPKATKAEQHEAQIPTQQHMEDTPPNTESGATDVLSV 171
>At1g05960.1 68414.m00625 expressed protein similar to hypothetical
protein GB:AAF80120 GI:8810459 from [Arabidopsis
thaliana ]
Length = 982
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 81 LTTIEPPPEFQDNPEKNAEAKTCTTVNILSQPAASIENSSKNLKTQNLDVAANIKH-VSP 139
+ T+ E ++ EK+ ++ C VN +S+P+ S +S+ L Q+LD ++ +
Sbjct: 531 ICTVRNQEEEKEKVEKSLNSELCKDVNHISRPSVS-GQTSQQLSCQSLDSLKDLDDGIKS 589
Query: 140 ICS 142
+CS
Sbjct: 590 LCS 592
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 30.7 bits (66), Expect = 3.1
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 316 SLQLTLREMRKYLHTLYSSSSDSECRNTVS-RKNNTVITSVGV--HAKHVNKDANSNMFH 372
SL++ ++ R++ + SSSDSE ++ S ++++ ++S + H +
Sbjct: 193 SLRVRRKKRRRHSSSESESSSDSETDSSESDSESDSDLSSPSFLSSSSHERQKKRKRSSK 252
Query: 373 KDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNL 408
KD + SK D +++K + KS++ D+L
Sbjct: 253 KDKHRRSKQRDKRHEKKRSMRDKRPKRKSRRSPDSL 288
>At4g29940.1 68417.m04259 pathogenesis-related homeodomain protein
(PRHA) identical to Pathogenesis-related homeodomain
protein (PRHA) (SP:P48785) [Arabidopsis thaliana)
Length = 796
Score = 30.3 bits (65), Expect = 4.1
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 337 DSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCG 396
+SE + +S++ + SV + + S+ K +K N N+RK+ + C
Sbjct: 3 ESETKGRISQETDKACVSV----ERIGSTLLSSFVKKGKEVSNKRNSKQNKRKAEEELCS 58
Query: 397 TNMKSKKQKDNL-AKDIEVDKTEKPTKKNASNPTQK 431
+ K + + +++E +K +K T+K S QK
Sbjct: 59 KSRTKKYSRGWVRCEEMEEEKVKK-TRKRKSKRQQK 93
>At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max}; similar to polyphosphoinositide binding
protein Ssh2, Glycine max, gb:T05953; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus
Length = 668
Score = 30.3 bits (65), Expect = 4.1
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 82 TTIEPPPEFQDNPEKNAEAKTCTTVNILSQPAASIENSSKNLKTQNLDVAANIKHVSPIC 141
TT PPP D + E ++ S+ A + S NLK + H + +
Sbjct: 7 TTTPPPPLTSDVSMPSGEEDE--PKHVTSEEEAPV-TSETNLKLPLMPELEESNHTAEVV 63
Query: 142 SKKSKPEMMYEHRQCLNHRFSSPRLLH 168
S+K PE M + LNH H
Sbjct: 64 SEKVTPETMTLESEGLNHAAEDSEQTH 90
>At1g20670.1 68414.m02589 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 652
Score = 30.3 bits (65), Expect = 4.1
Identities = 20/99 (20%), Positives = 39/99 (39%)
Query: 323 EMRKYLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSN 382
+ ++ H D N +R + S+ +K N ++N +E ++
Sbjct: 35 QQQQQQHKNNHQDDDDHHHNNNNRSGSKNPNSLNHRSKRRNPNSNDGDSPWIKDEGEDND 94
Query: 383 DPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPT 421
D + K K G N S + N D+ +D+T +P+
Sbjct: 95 DDERREKKHKLLHGLNSHSHRHSPNSQSDLNLDQTPEPS 133
>At1g17690.1 68414.m02190 expressed protein
Length = 754
Score = 30.3 bits (65), Expect = 4.1
Identities = 27/147 (18%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 275 HASIEKHHKAKESVRHKEIKIKRHSLPSS-SYKRNIVESDTDSLQLTLREMRKYLHTLYS 333
H S EK K +++ +HK ++ S PS+ S + + +E+++++ + RE +Y + L S
Sbjct: 12 HRSHEKFDKKRDTKKHKHVEKTIVSNPSTDSPEESSIEAESEA--MVYREPTQYQNLLVS 69
Query: 334 SSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSN--DPYNQRKST 391
S ++ ++++ + + + + S+++S ++ D +Q
Sbjct: 70 LGSSNKVVADMNKRRQREEEGKSDTEEDEDDEDEDEEENSGSDDLSSTDGEDDKSQGDDQ 129
Query: 392 KNSCGTNMKSKKQKDNLAKDIEVDKTE 418
+ G +++ DN +++ + D E
Sbjct: 130 ETLGGLTDDTQEDNDNQSEEEDPDDYE 156
>At5g51850.1 68418.m06428 expressed protein similar to unknown
protein (emb|CAB81354.1)
Length = 590
Score = 29.9 bits (64), Expect = 5.5
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 275 HASIEKHHKAKESV-RHKEIKIKRHSLPSSSYKRNIVESDTDSLQL-----TLREMRKYL 328
H HH +S R K +K+ SLPS++YK + + +++ T + L
Sbjct: 41 HLFDSHHHLTIDSPSRSKGLKLMEESLPSTTYKDKEISNIPVGMRVKTDTGTKSSRLRAL 100
Query: 329 HTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNM 370
T S+SS C + S+ N V +G+ D N ++
Sbjct: 101 VTDSSTSSSEICNSPGSKTPNLVARLMGLDLLPDKTDLNHSL 142
>At5g42400.1 68418.m05162 SET domain-containing protein (TXR7)
contains Pfam profile PF00856: SET domain
Length = 1423
Score = 29.9 bits (64), Expect = 5.5
Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 13/145 (8%)
Query: 271 TSIPHASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHT 330
++I + + EK K K + + L S + +++ DT S+ L++R+
Sbjct: 775 SNISNQTAEKLRKPCVGASEKVLVKRSKKLSDSHSMKEVLKVDTPSIDLSVRK------- 827
Query: 331 LYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKS 390
S + RNT R + + + +H + V KDA S + S ++ ++ +
Sbjct: 828 ----PSQQKMRNTDRRDHCIIKDATKLHKEKVGKDAFSKVICDKSQDLEMEDEFDDALLI 883
Query: 391 TKNSCGTNMKSKKQKD--NLAKDIE 413
T+ + K+K+ ++ N AK E
Sbjct: 884 TRLRRISRNKTKELRECRNAAKSCE 908
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 29.9 bits (64), Expect = 5.5
Identities = 31/166 (18%), Positives = 71/166 (42%), Gaps = 9/166 (5%)
Query: 275 HASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSS 334
H + ++ + S ++K+ + S N E + SL + E+ L S
Sbjct: 476 HETHQRESSTRLSELETQLKLLEQRVVDLSASLNAAEEEKKSLSSMILEITDELKQAQSK 535
Query: 335 SSD-----SECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRK 389
+ +E ++T+++K N + + V VH H +D++S + ++ + + + +
Sbjct: 536 VQELVTELAESKDTLTQKENELSSFVEVHEAH-KRDSSSQVKELEA-RVESAEEQVKELN 593
Query: 390 STKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMS 435
NS K Q+ + I++ + E T + S+ +++ K S
Sbjct: 594 QNLNSSEEEKKILSQQIS-EMSIKIKRAES-TIQELSSESERLKGS 637
>At5g28646.1 68418.m03507 wave-dampened2 (WVD2) nearly identical to
WAVE-DAMPENED2 [Arabidopsis thaliana] GI:28453880
Length = 293
Score = 29.9 bits (64), Expect = 5.5
Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 8/144 (5%)
Query: 279 EKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDS 338
E+ +A K +K K + +P Y+R V+ + LT + K + S SD+
Sbjct: 100 EEEQEAAIKQLRKNLKFKANPVPDFYYQRPPVKPELKKFPLTRPKSPKLNLSRRKSCSDA 159
Query: 339 ECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTN 398
+ N+ SV +V+++ + + + ++ D + RKS + +
Sbjct: 160 ITSSGEENSNSQNRQSVA----YVDRERLQHSINNEPRFSKEAKDFFQWRKSCEEEIDSV 215
Query: 399 MKSKK----QKDNLAKDIEVDKTE 418
K+K K L +D+ +D+ E
Sbjct: 216 NKNKTWFIVDKTKLKEDVCIDQYE 239
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 29.9 bits (64), Expect = 5.5
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 319 LTLREMRKYLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKH--VNKDA-NSNMFHKDS 375
L EM+K L SE ++VSR+ ++V++ V K + K + +S+ KD
Sbjct: 188 LVSNEMKKRTGKLGHCVIKSEAESSVSRQKSSVLSLVPCKKKSSALKKTSPSSSSRQKDE 247
Query: 376 NEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQ 430
+ + ++ + S ++ ++ K+ +AKD + + + KK T+
Sbjct: 248 KKSQEVSEEKIVTTTATTSARSSRRTSKEIAVVAKDTKTGRAKNNIKKQTDTKTE 302
>At3g59800.1 68416.m06673 expressed protein
Length = 186
Score = 29.9 bits (64), Expect = 5.5
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 13/144 (9%)
Query: 275 HASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSS 334
HA+ K ++ +E K K+ K+ +E+DTD L +RE R L S
Sbjct: 40 HAARLASLKTTHTITWEEYKQKQKE---EELKKGELEADTDKL---MREYRAQLDAERSL 93
Query: 335 SSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNS 394
S+ RN S K+ + K + H S+E S S+D R+S ++S
Sbjct: 94 KL-SKGRNYSSDKSRK-----DKKDRDSKKKKSKKRKHYSSSESSSSSDEDESRRS-RSS 146
Query: 395 CGTNMKSKKQKDNLAKDIEVDKTE 418
+ K KK K + K K E
Sbjct: 147 SKRSKKEKKHKSSRDKHSSKSKHE 170
>At2g39320.1 68415.m04827 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 189
Score = 29.9 bits (64), Expect = 5.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 376 NEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEK 419
N I K N R S+ +S MK +++K+N AK E ++ E+
Sbjct: 98 NSIYKKNKEKGSRSSSSSSSAVWMKLQRKKENEAKKKEEEEKER 141
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 29.9 bits (64), Expect = 5.5
Identities = 11/59 (18%), Positives = 34/59 (57%)
Query: 361 HVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEK 419
H+++ + M + SK+ND +++ T+ T ++ +K+++N + +E++ +++
Sbjct: 1546 HISERVRNEMAKRILQVESKANDGSSKKNETEGQESTGLRGRKKRENHQELVELETSDQ 1604
>At1g52670.1 68414.m05947 biotin/lipoyl attachment domain-containing
protein similar to SP|Q06881 Biotin carboxyl carrier
protein of acetyl-CoA carboxylase (BCCP) {Anabaena sp.};
contains Pfam profile PF00364: Biotin-requiring enzyme
Length = 274
Score = 29.9 bits (64), Expect = 5.5
Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 269 QNTSIPHASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYL 328
Q +++P A E K+S K + H +P SS ++ TDS + E++
Sbjct: 57 QLSTVPPAETEAIADVKDSDETKSTVVNTHLMPKSSEVEALISEITDSSSIAEFELKLGG 116
Query: 329 HTLY-SSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDP 384
LY + E + V S H N A S+ S ++ P
Sbjct: 117 FRLYVARKLTDESSPPPQQIQPVVAASATPEGVHTNGSATSSSLAITKTSSSSADRP 173
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 29.5 bits (63), Expect = 7.2
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Query: 334 SSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKN 393
S S+ + + T G K++ K + +KS+ P ++ + K
Sbjct: 568 SESEENVESEEESEEETKKKKRGSRTSSDKKESAGKSRSKKTAVPTKSSPP--KKATQKR 625
Query: 394 SCGTNMKSKKQKDNLAK-DIEVDKTEKPTKKNASNP 428
S G KS D K + KTEKP K+ A+ P
Sbjct: 626 SAGKRKKSDDDSDTSPKASSKRKKTEKPAKEQAAAP 661
>At5g46795.1 68418.m05765 expressed protein
Length = 192
Score = 29.5 bits (63), Expect = 7.2
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 400 KSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPK 433
+ K+++ N+ K + ++K K TKKN +N T KPK
Sbjct: 142 EEKEEEINVEKPL-LEKKNKKTKKNDANETCKPK 174
>At4g35880.1 68417.m05095 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 524
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 339 ECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKST 391
E TV+ N T + + A + NS+ HK + ISKSN NQ T
Sbjct: 456 ETNTTVAGTNKTAAVAPAM-AAGIKTHNNSSELHKTNQTISKSNSSPNQISKT 507
>At4g32610.1 68417.m04643 mitochondrial glycoprotein family protein
/ MAM33 family protein low similarity to SP|P40513
Mitochondrial acidic protein MAM33, mitochondrial
precursor {Saccharomyces cerevisiae}; contains Pfam
profile PF02330: Mitochondrial glycoprotein
Length = 557
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 364 KDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKK 423
KD N +D E + ND ++++T + K KK+KD K+++ ++E +
Sbjct: 186 KDENGQQDSQDKGEKKEVNDEGEKKENTTGESKAS-KKKKKKDK-QKELKESQSEVKSNS 243
Query: 424 NASNPTQKPKMSTVRI 439
+A++ + + + S+ I
Sbjct: 244 DAASESAEQEESSSSI 259
>At4g26190.1 68417.m03770 expressed protein
Length = 1067
Score = 29.5 bits (63), Expect = 7.2
Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 8/174 (4%)
Query: 278 IEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSD 337
I+KH K + K K+ + S+ + S + K S+S+
Sbjct: 25 IDKHKKRSGKKKRKSRKLDNEVKDNDSH----ISSQIGNADEAFSSQEKKEGENEKSTSE 80
Query: 338 SECRNTVSRKNNTVITSVGVHAKHVN-KDANSNMFHKDSNEISKSNDPYNQRKSTKNSCG 396
S+ R +S + + + V+ ++ + + H D S N++ S+
Sbjct: 81 SQVR--LSENLLSSLPAESCQRDSVSCEEPRATLHHTDPISCEDSLPDDNRKGSSTKKSK 138
Query: 397 TNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKP-KMSTVRILSINLKQSFC 449
K KK++D ++ +D+ EK T ++ +P P V+ S L Q C
Sbjct: 139 RREKKKKKEDLSCEEKLLDEVEKITSEDQVHPPNNPLSNGMVQERSGELTQDSC 192
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 29.5 bits (63), Expect = 7.2
Identities = 23/125 (18%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Query: 312 SDTDSLQLTLREMRKYLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVN-KDANSNM 370
S + + +L++ + H+ + S S R ++S + TS + +N A+ +
Sbjct: 130 SASKASRLSVSQSESGYHSSRPARSSSVTRPSISTSQYSSFTSGRSPSSILNTSSASVSS 189
Query: 371 FHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQ 430
+ + S+ S+S+ T+ S + + + + +DK S PT
Sbjct: 190 YIRPSSPSSRSSSSARPSTPTRTSSASRSSTPSRIRPGSSSSSMDKARPSLSSRPSTPTS 249
Query: 431 KPKMS 435
+P++S
Sbjct: 250 RPQLS 254
>At1g56290.1 68414.m06471 CwfJ-like family protein contains Pfam
profiles PF04677: Protein similar to CwfJ N terminus 1,
PF04676: Protein similar to CwfJ N terminus 2
Length = 692
Score = 29.5 bits (63), Expect = 7.2
Identities = 34/172 (19%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 354 SVGVHAKHVNKDANSNMFHKDSNEISK-SNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDI 412
S G +++ +S + + + ++K SND ++ ++ + + + D+
Sbjct: 258 SWGKRKSQTHRNEDSKLISEAAAHMNKFSNDGNFMKEMLSKQKNVSVSPVETRGDHRSDV 317
Query: 413 EVDKTEKPTKKNASNPTQKPKMSTVRILSINLKQSFCNLFRWRRQPVVDNVTEVERL-GK 471
E + P++ N + P M + + + K + + + + + E ERL K
Sbjct: 318 EQEAL--PSETNKDDEGTLPSMENLSVNKLAAKALQLRM-KGKHEEAQKIMEEAERLKAK 374
Query: 472 QGKIDESXXXXXXXXXXXXXQTPHTSHASRRATNDEETIMDFAKSIQKVKDY 523
Q D+S + P + RR N+++T M AKSI + K Y
Sbjct: 375 QAVGDDSSKDHHSIRTAV--RYPVKDMSGRRK-NEDDTDMHLAKSIMQNKQY 423
>At5g38840.1 68418.m04698 forkhead-associated domain-containing
protein / FHA domain-containing protein related to
adaptor protein kanadaptin [Homo sapiens]
gi|13562130|gb|AAK29177
Length = 735
Score = 29.1 bits (62), Expect = 9.5
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 285 KESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDSECRNTV 344
K ++ +E+KIK+ PS K NI D + +E+ K L S + E N
Sbjct: 494 KRELKSQELKIKKSETPSVEKKINIPLKQADPNEHKEKEVAK---DLVDSENKPEVENKA 550
Query: 345 SRKNNTVITSVGVHAK--HVNKDANSNMFHKDSNEI 378
S T+V V +K + AN + + + EI
Sbjct: 551 SETAEEKKTTVYVPSKPQWLGSAANKAIIEEKNPEI 586
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 29.1 bits (62), Expect = 9.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 383 DPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMST 436
D Q + + G K K+K A D E KTE+P+KK ++ + + T
Sbjct: 440 DSLLQTPTVDSENGVKEKKDKKKKKKADDEEEAKTEEPSKKKSNKKKTEAEPET 493
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 29.1 bits (62), Expect = 9.5
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 11/79 (13%)
Query: 357 VHAKHV----NKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDI 412
VH +H N +SN + S + K+ N + S K+ +N KS K+ D
Sbjct: 1088 VHVRHCFSAKNLRIDSNPSNSKSQSLKKNEGDSNSKSSKKSDGDSNSKSSKKSDG----- 1142
Query: 413 EVDKTEKPTKKNASNPTQK 431
D K +KK+ + K
Sbjct: 1143 --DSNSKSSKKSDGDSNSK 1159
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 29.1 bits (62), Expect = 9.5
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 369 NMFHKDSNEI----SKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKD-IEVDKTEKPTKK 423
NM K+S+E+ SK + ++ KN C + K+ + + K+ ++ +K +K +K
Sbjct: 227 NMMQKNSSEMAEKDSKREEKLLLKQLEKNRCEAEKEKKRMERQVLKEKLQQEKEQKLLQK 286
Query: 424 NASNPTQKPKMSTVRILSINLKQSFCNLFRWRRQPVVDNVTEVERLGKQGKIDE 477
+ K K T I +Q + RR+ + + ++ KQ I E
Sbjct: 287 AIVDENNKEKEETESRKRIKKQQDESEKEQKRREKEQAELKKQLQVQKQASIME 340
>At1g52450.1 68414.m05921 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1136
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 398 NMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMST 436
NM+ K + D +A D+ +++ +KP K ++ K + ST
Sbjct: 693 NMERKAKADAVAADLALEEEKKPQSKKKNDKINKHRAST 731
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.129 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,702,212
Number of Sequences: 28952
Number of extensions: 529608
Number of successful extensions: 1853
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1807
Number of HSP's gapped (non-prelim): 82
length of query: 644
length of database: 12,070,560
effective HSP length: 86
effective length of query: 558
effective length of database: 9,580,688
effective search space: 5346023904
effective search space used: 5346023904
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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