Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000669-TA|BGIBMGA000669-PA|IPR000980|SH2 motif
(644 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0517 + 16712487-16712570,16713715-16714059,16714149-167143... 35 0.23
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 32 1.2
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 32 1.2
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 31 2.1
08_02_0270 + 15108178-15108587,15108678-15108774,15109445-151094... 31 2.1
06_03_0034 - 15727569-15727826,15728483-15728713,15728789-157291... 31 2.1
05_03_0013 + 7362056-7362471,7363235-7364081,7364272-7364758,736... 31 2.1
12_02_1091 - 26001129-26001181,26001292-26001325,26001339-260014... 31 2.8
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 31 3.7
11_06_0710 - 26492093-26493460 31 3.7
08_01_0186 - 1561695-1561958,1562041-1562183,1562260-1562326,156... 31 3.7
05_06_0046 - 25157093-25157431,25157810-25157928,25158024-251581... 31 3.7
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 30 5.0
03_06_0415 - 33775143-33775305,33775438-33775565,33775654-337757... 30 5.0
01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142... 30 5.0
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 30 6.5
05_07_0360 + 29542854-29542900,29542988-29543129,29543207-295445... 30 6.5
02_04_0591 - 24159654-24160155,24160233-24160316,24160898-241609... 30 6.5
08_02_1275 - 25792148-25792227,25792457-25792488,25792590-257926... 29 8.7
07_03_1357 - 25982861-25983068,25983354-25983361 29 8.7
04_03_0232 - 13049649-13052807 29 8.7
>04_03_0517 +
16712487-16712570,16713715-16714059,16714149-16714301,
16714889-16714972,16715426-16715479,16715552-16715647,
16716163-16716258,16716941-16717086,16717650-16717799,
16717889-16718018,16718128-16718787,16718881-16718979,
16719058-16719210,16719323-16720054,16720338-16720640
Length = 1094
Score = 34.7 bits (76), Expect = 0.23
Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 18/198 (9%)
Query: 286 ESVRHKEIKIKRHSLPSSSYKRNIV-----ESDTDSLQLTLREMRKYLHTLYSSSSDSEC 340
+S + + + R + + S K N V E D + L+ +R+++ LH + S SD
Sbjct: 402 QSCKSETLSTLRFAQRAKSIKNNAVVNEQKEEDVNMLREQIRQLKDELHRMKSGGSDGS- 460
Query: 341 RNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSND------PYNQRKST--- 391
N S+ + +++ H+DS ++ D PYNQ
Sbjct: 461 -NGSFSTGWNARRSLHLLKMSLSRPTTFQTIHEDSGDVEMEIDENDVEKPYNQDNMVISP 519
Query: 392 --KNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMSTVRILSINLKQSFC 449
C S K + D+ + PTK++ S+ K ++ + + ++
Sbjct: 520 PGDKECKELQASLKINGGTSLDVFDGENLMPTKRSCSDDRYKLNLAASIQRGLQVIENHQ 579
Query: 450 NLFRWRRQPVVDNVTEVE 467
N WRR V N V+
Sbjct: 580 NNGAWRRASVGFNARIVD 597
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 32.3 bits (70), Expect = 1.2
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 291 KEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRK-YLHTLYSSS-SDSECRNTVSRKN 348
KE K++R S++ KR V++ ++ RK Y YSS SD++ ++ S
Sbjct: 144 KEKKLRRTEDNSAAEKR--VKTQKPPTHDKQKKKRKHYSSDSYSSDYSDTQSSDSGSESE 201
Query: 349 NTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNL 408
+ +S+ + ++ KD + +K + +K+ + S GT KSK+ +
Sbjct: 202 SYSSSSLDTSSSSDHRHKRRKSSKKDKHRSAKGKSKH--KKTKRKSRGTKRKSKRSYRSS 259
Query: 409 AKDIEVDKT 417
+ D + KT
Sbjct: 260 SDDSDSSKT 268
Score = 31.5 bits (68), Expect = 2.1
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 279 EKHHKAKESVRHKEIKIKRHSL---PSSSYKRNIVESDTD----SLQLTLREMRKYLHTL 331
+KH AK +HK+ K K SY+ + +SD+ S + E R+ T
Sbjct: 227 DKHRSAKGKSKHKKTKRKSRGTKRKSKRSYRSSSDDSDSSKTGGSSSDSESEGRRTTRTK 286
Query: 332 YSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSN 376
+SS D + T+S + ++ + + D SN K SN
Sbjct: 287 HSSKKDPDNTKTISLEKDSTLEDADKGKQTATLDNISNEGSKPSN 331
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 32.3 bits (70), Expect = 1.2
Identities = 23/115 (20%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 281 HHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDSE- 339
H A+ +E+K+ R+ L ++ + D L + LRE L + S+S+++
Sbjct: 1396 HFSARSFACSEELKLLRNRLQHHLAEQKELVKKNDVLGMRLREKENVLSEMVRSASEAKK 1455
Query: 340 ----CRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHK-DSNEISKSNDPYNQRK 389
T+ K + V + + + +N+ ++HK +S+++ + +N+R+
Sbjct: 1456 KMAHLEKTIDEKEEEISARVQEKREAIKQLSNAIIYHKNNSDDLIRYIRNHNRRR 1510
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 31.5 bits (68), Expect = 2.1
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 15/157 (9%)
Query: 277 SIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSS 336
S+E K KE + K KRH S S KR+ ++DS + R+ R+ S
Sbjct: 176 SVEAEKKQKEEKKEKRKHKKRHHHKSKS-KRHHSSENSDSEESDGRDERR------KSVQ 228
Query: 337 DSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCG 396
SE + R + K +D+ + K + S+ ++P +K K
Sbjct: 229 ASEHKREEKRSRHD--------KKDHGQDSEDDERRKRRHATSEDDEPRKSQKEKKGQRE 280
Query: 397 TNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPK 433
+ K +K + + E+P +K+ + +PK
Sbjct: 281 DSEDDKPKKSRKDRRRHDSEDEEPRRKHQRSEDDEPK 317
>08_02_0270 + 15108178-15108587,15108678-15108774,15109445-15109492,
15109583-15109806,15111367-15111463,15111556-15111651,
15112297-15112544,15112632-15112715,15112787-15113236,
15114880-15115024,15115116-15115217,15115677-15115769,
15117308-15117349,15119085-15119113,15119210-15119251,
15119922-15119997,15120764-15120835,15121208-15121326,
15121428-15121491,15121576-15123009
Length = 1323
Score = 31.5 bits (68), Expect = 2.1
Identities = 13/80 (16%), Positives = 35/80 (43%)
Query: 322 REMRKYLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKS 381
R++++Y T Y + D + ++ + + T + ++ +H+ D + +N+I
Sbjct: 1160 RDVQEYARTYYGHNRDEVPQTAINTPSMDIRTHIRMYGRHIRDDHTQTTMNPPANDIRAQ 1219
Query: 382 NDPYNQRKSTKNSCGTNMKS 401
Y Q ++ + + S
Sbjct: 1220 IRMYGQHATSDHQHASRYSS 1239
>06_03_0034 -
15727569-15727826,15728483-15728713,15728789-15729151,
15729260-15729413,15729997-15730275,15730328-15730770
Length = 575
Score = 31.5 bits (68), Expect = 2.1
Identities = 26/146 (17%), Positives = 54/146 (36%)
Query: 270 NTSIPHASIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLH 329
N + SI H KE + + ++ S+P + + E + D+ + L K H
Sbjct: 383 NIDMGTGSIRFHINGKEEKFEFQPRTEQCSMPGEIHAKFPGEGNNDAQEPLLENAGKTTH 442
Query: 330 TLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRK 389
T + + K + A+ + N+ + E S S+ ++
Sbjct: 443 TGQEARAAGSEEAVFRTKAKEGVEGEAKDARSITFGDGWNIHELNQKEGSGSSSSHHDES 502
Query: 390 STKNSCGTNMKSKKQKDNLAKDIEVD 415
S ++S +M+ + L D ++D
Sbjct: 503 SARSSADVSMEDTEAPRRLLNDTDLD 528
>05_03_0013 +
7362056-7362471,7363235-7364081,7364272-7364758,
7365062-7365126,7365275-7365643
Length = 727
Score = 31.5 bits (68), Expect = 2.1
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 8/134 (5%)
Query: 336 SDSECRNTVSR--KNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKN 393
SD +T+ R K NT V KH+ K+A+S+ N +D + +
Sbjct: 120 SDFAYFHTIRRYTKQNTQFGKRKVFQKHIPKEASSSSSENGENSSDGESDSSGECSDDSD 179
Query: 394 SCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMSTVRILSINLKQSFCNLFR 453
S +S + + E E KK SN + VRI +I+ N+
Sbjct: 180 S----SESSEHAHSAPSVQETSSRELKRKKILSNSPVYSSLKKVRI-AIDSDDEDDNILS 234
Query: 454 WRRQPVVDNVTEVE 467
+ P VD + EVE
Sbjct: 235 Y-ELPAVDKMVEVE 247
>12_02_1091 -
26001129-26001181,26001292-26001325,26001339-26001437,
26002327-26002369,26002389-26002494,26002776-26002818,
26003526-26003579,26003831-26003911,26003997-26004119,
26004197-26004846,26004928-26005554,26005633-26005870,
26006082-26006258,26006373-26006723,26006824-26007111,
26008340-26008462,26008551-26009007,26009115-26009263,
26009466-26009489
Length = 1239
Score = 31.1 bits (67), Expect = 2.8
Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 306 KRNIVESDTDSL----QLTLREMRKYLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKH 361
++NIV D + T RK +SSS+ +SR ++ V+ K+
Sbjct: 704 RKNIVAKTMDDTLRPKEYTYYRKRKLRKNCEASSSEKPMDEQLSRPLRDLV-ECKVNMKN 762
Query: 362 VNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPT 421
+++ + + + S +S P +R ++ N+ N+ +D+++ + P
Sbjct: 763 IHRSSKAGI----SQRVSVVEKPSKKRAKPSHNDNINL-------NIQQDLKLLSDKVPK 811
Query: 422 KKNASNPTQKPKMST 436
+ +S+PT KP +S+
Sbjct: 812 RNRSSHPTSKPLVSS 826
>12_02_0953 -
24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 311 ESDTDSLQLTLREMRKYLHTLYSSSSDS-ECRNTVSRKNNTVITSVGVHAKHVNKDANSN 369
E+DT S ++TL+ +H + + D + + +NNT++ + + ++K+
Sbjct: 720 ENDTRSAKMTLKFREDKIHQMEALVRDKLPAESYLLEENNTLLKEIDLLRAKIDKNPEVT 779
Query: 370 MFHKDSNEISKSNDPYNQ 387
F ++ +S YNQ
Sbjct: 780 RFALENIRLSNKLKSYNQ 797
>11_06_0710 - 26492093-26493460
Length = 455
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 363 NKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTK 422
++D K N +D +K + + K KK+K + K + + EKP K
Sbjct: 170 DEDDKKKSKKKPKNPDDDEDDKKKSKKKSSDEDNDGAKKKKKKKSKGKSSDEEDDEKPKK 229
Query: 423 KNAS 426
K+ S
Sbjct: 230 KSKS 233
>08_01_0186 -
1561695-1561958,1562041-1562183,1562260-1562326,
1562417-1562529,1562603-1562671,1563831-1563870,
1563965-1564035,1565872-1566027,1566104-1566152,
1566228-1567631
Length = 791
Score = 30.7 bits (66), Expect = 3.7
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 281 HHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDSEC 340
HH+ + +++ I + LP +Y + ES+T E T SSSSDSE
Sbjct: 481 HHEEGNELVEEDVDIGGNDLPPLTYPPAVFESET-------AERSSKHSTSSSSSSDSES 533
Query: 341 RNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNS 394
++ S +++ + + V+ A N + + + + NDP + + S
Sbjct: 534 SSSDSDSSSSSGSDLDVNVPPSTSGAKDNT--QSAVRLDQENDPLSSTNLPQQS 585
>05_06_0046 -
25157093-25157431,25157810-25157928,25158024-25158189,
25158289-25158415,25158490-25158590,25158719-25158905,
25159000-25159100,25159220-25160194,25160325-25160423,
25160500-25160972,25161307-25161420,25161830-25161900,
25162015-25162086,25162334-25162377
Length = 995
Score = 30.7 bits (66), Expect = 3.7
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 360 KHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEK 419
K + A +N+ + K D + S KNS + KS +K + ++E + T K
Sbjct: 78 KSMEAAAGTNVVSTQEAPVVKLADGSDCVNSGKNS-KRSQKSLTRKRKVTSEMEKN-TAK 135
Query: 420 PTKKNASNPTQKPKMSTVRILSI 442
+AS PT KP ST + + +
Sbjct: 136 DATASASQPTTKPSFSTNKRIQV 158
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 30.3 bits (65), Expect = 5.0
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 333 SSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTK 392
SSS D + V+R N +++ + D +S+ D + K P + +
Sbjct: 116 SSSDDEPAKKPVARPNKAALST-----NSSSSDDSSDESLSDDEPVKKPAAPLKKPVAL- 169
Query: 393 NSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPKMSTVR 438
TN K + D+ + D D+ K + P +KP ++ ++
Sbjct: 170 ---ATNGSKKVETDSSSSDSSSDEESDEDDKKTAAPVKKPSVAAIQ 212
>03_06_0415 -
33775143-33775305,33775438-33775565,33775654-33775761,
33775809-33775909,33776265-33776805,33777290-33777847
Length = 532
Score = 30.3 bits (65), Expect = 5.0
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 350 TVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRK 389
T+ TS G +H KD+ + H+D +++S S+D + K
Sbjct: 172 TLGTSDGSSQRHKQKDSGGHKHHQDKHDVSPSSDLVRKSK 211
>01_01_0167 +
1422344-1424260,1424338-1424472,1424568-1424990,
1425183-1425252,1425356-1425495,1425620-1425679,
1425776-1425931,1426272-1426541
Length = 1056
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 358 HAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKD-NLAKDIEVDK 416
H N DA + SNEIS+S D ++ + N + D + K ++VD
Sbjct: 736 HLDGSNSDAMDEVESHQSNEISESGDDIDKAEGENNVATSESTVVTTNDASGGKSVDVDM 795
Query: 417 TEKP 420
+KP
Sbjct: 796 ADKP 799
>11_01_0442 -
3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 29.9 bits (64), Expect = 6.5
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 285 KESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDSEC 340
KE ++E+ ++ S+ S K+ VES ++L+ L + + L+ + +D EC
Sbjct: 589 KEKTMYEELVVQMESMKIESEKKLGVESAKEALEARLLVVNSEIAKLHGTVNDLEC 644
>05_07_0360 +
29542854-29542900,29542988-29543129,29543207-29544529,
29544642-29544715,29545850-29545964,29546682-29546714
Length = 577
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 324 MRKYLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSND 383
+R YL TLYS S D+ N + NN + TS + +++ + + + ++D
Sbjct: 178 LRGYLTTLYSLSQDNVVDND-DKDNNNINTSTSNMRRLIHQQIRRSSSSESDKKKEDADD 236
Query: 384 PYNQRKSTKNSCGTNMKSKKQKDN 407
+Q S+ +S + + +D+
Sbjct: 237 EDDQAPSSSSSYTDTLILLRSRDS 260
>02_04_0591 -
24159654-24160155,24160233-24160316,24160898-24160944,
24161035-24161103,24161259-24161310,24161693-24161775,
24162312-24162422,24162808-24163211,24163308-24163380,
24163460-24163510,24163882-24164073,24164176-24164302,
24164753-24164934,24165023-24165226,24165738-24165836
Length = 759
Score = 29.9 bits (64), Expect = 6.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 375 SNEISKSNDPYNQRKSTKNSCGTNMKSKKQKDNLAKDIEVDKTEKPTKKNASNPTQKPK 433
+ ++SK + + + ST+ + G K+QK +L + E D E K + PK
Sbjct: 392 TGKLSKQSSKDDSKSSTRKASGAGSSKKQQKISLKQKDETDSKEDTAKDLSLKEMVSPK 450
>08_02_1275 -
25792148-25792227,25792457-25792488,25792590-25792651,
25792721-25792801,25793086-25793241,25793292-25793348,
25793349-25793510,25793586-25793648,25793742-25793804,
25793895-25793948,25794334-25794390,25794479-25794547,
25795053-25795166,25795245-25795316,25795406-25795527,
25796416-25796617
Length = 481
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 402 KKQKDNLAKDIEVDKTEKPTKKNASNPTQK 431
+KQ D L KD+E +K T +N +N +K
Sbjct: 130 EKQIDKLKKDVEAQSVKKATLENRANDAEK 159
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 29.5 bits (63), Expect = 8.7
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 546 SFIVRDSSDDHYIFTLTFKLNGLRHVRIEHDQGNFCFGG 584
SFIVR S+ H F+LT L G VR++ GG
Sbjct: 13 SFIVRLESEKHIAFSLTSPLGGSPAVRVKRKNQKASGGG 51
>04_03_0232 - 13049649-13052807
Length = 1052
Score = 29.5 bits (63), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 118 NSSKNLKTQNLDVAANIKHVSPICSKKS 145
NS +NLK +LD + HV P+CS S
Sbjct: 897 NSFENLKFLHLDRCPRLVHVLPLCSSNS 924
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.129 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,203,146
Number of Sequences: 37544
Number of extensions: 590952
Number of successful extensions: 1693
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1666
Number of HSP's gapped (non-prelim): 36
length of query: 644
length of database: 14,793,348
effective HSP length: 87
effective length of query: 557
effective length of database: 11,527,020
effective search space: 6420550140
effective search space used: 6420550140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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