Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000669-TA|BGIBMGA000669-PA|IPR000980|SH2 motif
(644 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 30 0.051
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 27 0.36
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 3.4
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 24 3.4
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 24 3.4
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 24 4.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 4.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 4.4
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 23 7.8
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 30.3 bits (65), Expect = 0.051
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 279 EKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDS 338
EK H KE + + KR+S S ++N +++ RE RKY S D
Sbjct: 253 EKLHNEKEKLLEERTSRKRYSR-SREREQNSYKNE--------REYRKYRERSKERSRDR 303
Query: 339 ECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRK 389
R SR+ +I+S+ H N + N+N ++ + N + +N YN K
Sbjct: 304 TERER-SREPK-IISSLSNKTIHNNNNYNNNNYNNNYNNYNNNN--YNNYK 350
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 27.5 bits (58), Expect = 0.36
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 279 EKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVESDTDSLQLTLREMRKYLHTLYSSSSDS 338
EK H KE + + KR+S S ++N +++ +E RKY T S D
Sbjct: 20 EKLHNEKEKLLEERTSRKRYSR-SREREQNSYKNE--------KEYRKYRETSKERSRDR 70
Query: 339 ECRNTVSRKNNTVITSVGVHAKHVNKDANSNMFHKDSNEISKSNDPYNQRKSTKN 393
R SR+ +I+S+ H N+N + +N+ + +N+ YN++ KN
Sbjct: 71 TERER-SREPK-IISSLSNKTIH----NNNNYKYNYNNKYNYNNNNYNKKLYYKN 119
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 3.4
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 65 MCDFFNTVKKGPGKVILTTIEPPPEFQ 91
+C+ N + G VI +++ PP F+
Sbjct: 754 LCEAVNGIGAGLSAVIFISVQAPPHFE 780
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 24.2 bits (50), Expect = 3.4
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 286 ESVRHKEIKIKRHSLPSSSYKRNIVE 311
E R+K+++I + + PSSS K ++E
Sbjct: 184 EEQRYKQVEISQMTEPSSSTKSYVLE 209
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 24.2 bits (50), Expect = 3.4
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 559 FTLTFKLNGLRHVRIEHDQGNFCFGGCTMFKAQ--TIVEFIENA-VETSRSGRYLFFLNL 615
F +L +R R H +F G + + +IV +E VE SR G+YL L
Sbjct: 102 FMKNLELTQIRRDRGLHVSCSFSAGSTIIREGDVGSIVYVMEEGKVEVSRDGKYLSTLAP 161
Query: 616 RPVLGPVRV 624
VLG + +
Sbjct: 162 GKVLGELAI 170
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.8 bits (49), Expect = 4.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 597 IENAVETSRSGRYLFFLNL 615
++N VET+ SG LF +NL
Sbjct: 450 LKNKVETTHSGTSLFRINL 468
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.8 bits (49), Expect = 4.4
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 217 TATTDITDMYNVPFDSDIYAVPIDMIRPGQSNIKHXXXXXXXXXXXXXXXISQNTSIPHA 276
+A + D+YNV D Y +++ + NI H + +I +
Sbjct: 389 SALRALNDLYNVKNTLDSYNGSMEINQNIAQNIDHAKNTIIDYRNNDLSINEEKRTIENE 448
Query: 277 SIEKHHKAKESVRHKEIKIKRHSLPSSSYKRNIVES 312
+ + +K+ + KE K + S+ K N VE+
Sbjct: 449 QLNRMYKSYPNYIDKETKDMNLEI-STRPKSNTVEN 483
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.8 bits (49), Expect = 4.4
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 313 DTDSLQLTL-REMRKYLHTLYSSSSDSECRNTVSRKNNTVITSVGVHAKHVNKDANSNMF 371
D+DS L L + + +L S++ S C V+++ N V + + + + + N+N
Sbjct: 491 DSDSRLLDLCTKFLMHKDSLGLSTATSTCSLAVAKQQNQVPLTSSSNVNNNSGNGNTNSS 550
Query: 372 HKDSNEISKS 381
+DS+ +S
Sbjct: 551 ARDSSPAIES 560
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 23.0 bits (47), Expect = 7.8
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 348 NNTVITSVGVHAKHVNKDANS-NMFHKDSNEISKSNDPYNQRKSTKNSCGTNMKSKKQKD 406
NN I + + N A S N+F ++ + +SN +++ K ++S +K +++
Sbjct: 4 NNLTIVIILIMCGVQNLRARSVNIFQDIADCVDRSNMTFHELKKLRDSSEARIKLINEEE 63
Query: 407 N 407
N
Sbjct: 64 N 64
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.314 0.129 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,221
Number of Sequences: 429
Number of extensions: 6087
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 10
length of query: 644
length of database: 140,377
effective HSP length: 62
effective length of query: 582
effective length of database: 113,779
effective search space: 66219378
effective search space used: 66219378
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)
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