Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000668-TA|BGIBMGA000668-PA|IPR006683|Thioesterase
superfamily
(104 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31F10.02 |||thioesterase superfamily protein|Schizosaccharom... 64 4e-12
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 27 0.46
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 0.60
SPBC26H8.11c |||conserved fungal protein|Schizosaccharomyces pom... 26 1.1
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 26 1.4
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 1.8
SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr 1|||M... 25 1.8
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 25 2.4
SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces po... 25 2.4
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 25 2.4
SPAP11E10.01 |||ornithine cyclodeaminase family |Schizosaccharom... 25 3.2
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 24 4.3
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 24 4.3
SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 24 5.6
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch... 24 5.6
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 24 5.6
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 23 9.8
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 23 9.8
>SPBC31F10.02 |||thioesterase superfamily
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 161
Score = 64.1 bits (149), Expect = 4e-12
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 11 HLNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSF-YSAAKEGDNIEVEAK 69
HLN+ G LHGG IA L D + AL + + GVSID++ +F S G +I + AK
Sbjct: 55 HLNRMGNLHGGCIAALTDLGGSLAL-ASRGLFISGVSIDMNQTFLQSGGTLGSSILLHAK 113
Query: 70 TRKTGKKIAFLEVEVRNKDKNQVLASGRHTKYI 102
+ G IAF V+ N+V A GRHTK++
Sbjct: 114 CDRLGSNIAFTSVDFLT-SSNEVFAKGRHTKFV 145
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 27.5 bits (58), Expect = 0.46
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 41 VDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKK 76
+ +G+ S SA GD++EVE + K K+
Sbjct: 268 ISKQGIKFKTSTKLLSAKVNGDSVEVEIENMKNNKR 303
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.1 bits (57), Expect = 0.60
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 58 AKEGDNIEVEAKTRKTGKKIAFLEVE-VRNKDKNQ 91
AKE D+IEV+ K KT K +VE +KD N+
Sbjct: 496 AKETDSIEVDDKEEKTDSKETADKVEQTDSKDTNE 530
>SPBC26H8.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 1.1
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 15 RGTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKT- 73
+ +HGGFI ++D + + N GV++ L ++ + A ++ KT K
Sbjct: 74 KNIVHGGFITTMLDEALAFGVFPN-FPSKMGVTVQLDTTYVAPALCSHLYKIVTKTTKVE 132
Query: 74 GKK 76
G+K
Sbjct: 133 GRK 135
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 25.8 bits (54), Expect = 1.4
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 39 ENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTR--KTGKKIAFLEVEVRNKDKNQVLASG 96
E++D SIDL +S +A N+ KT +K + + E N+D N + ++G
Sbjct: 123 ESMDIDMPSIDLDISNAAAFPRDSNLLFRNYNSHTKTSEKGSPVNFEKENQDSNVLFSTG 182
Query: 97 R 97
R
Sbjct: 183 R 183
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 25.4 bits (53), Expect = 1.8
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 39 ENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIAFLEVEVRNKDK 89
E+VD + +S++ SL+ K+GD + EA R+ F E + + K
Sbjct: 113 EHVDHQNISLEASLAEEEERKKGDAKKSEATGRQLFDDDDFDESDAEDSSK 163
>SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 274
Score = 25.4 bits (53), Expect = 1.8
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 43 TRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQ 91
TRGV + F A+E D I+ + T K K I E+EV + K +
Sbjct: 86 TRGVKV-----FREQARETDEIDFQLITSKVTKLIDSSEIEVDAEPKEE 129
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 25.0 bits (52), Expect = 2.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 27 VDAISTYALTTNENVDTRGVSIDLSLSFYSAAKEGDNI 64
+D + YA T RG+ I ++L Y +E D I
Sbjct: 512 IDEMLQYAHETQHEKIIRGLGIGIALIVYGRQQEADGI 549
>SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 521
Score = 25.0 bits (52), Expect = 2.4
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 25 HLVDAISTYALTTNENVDTRGVSIDLSLSF 54
H V + ST+ + ++N+ G+++ SLS+
Sbjct: 142 HFVTSPSTFFIRYDDNITVAGINVQDSLSY 171
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.0 bits (52), Expect = 2.4
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 38 NENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQVLASGR 97
NE + ++G ++ SL A+KE + EV + K+ EV + KD + L + +
Sbjct: 9 NERITSQG-NLVRSLKSQGASKEDIDKEVAKLLQLKNLKLGGSEVSGKKKDTSFTLKTPK 67
Query: 98 HTK 100
TK
Sbjct: 68 GTK 70
>SPAP11E10.01 |||ornithine cyclodeaminase family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 330
Score = 24.6 bits (51), Expect = 3.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 18 LHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKEG 61
L GGF H+ +A S +N VDTR ++ + + KEG
Sbjct: 228 LVGGFTPHMHEADSKCIQISNVFVDTRKGALHEAGDLLTPIKEG 271
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 24.2 bits (50), Expect = 4.3
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 38 NENVDTRGVSIDLSLSFYSAAKEGDNIEVEAK 69
NE++ T+ V I+L+ ++Y+A G + + + K
Sbjct: 109 NEDIWTKVVGINLNGAYYTAQAAGHHFKKQGK 140
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 24.2 bits (50), Expect = 4.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 63 NIEVEAKTRKTGKKIAFLEVEVRNKDKNQVLASGRHTKYI 102
N E+EAK ++ I L E+ NK++ S KYI
Sbjct: 1112 NKELEAKVKECLNNIKSLTKELENKEEKCQNLSDASLKYI 1151
>SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 23.8 bits (49), Expect = 5.6
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 6 QVGPEHLNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSI---DLSLSFYSAAKEGD 62
Q+GPE++++R GG + +L +A L NE G S D+ + + KE
Sbjct: 28 QLGPEYISRRSGPGGGSVTYL-EAWKAIEL-ANEIFGFNGWSSSIQDIHVDYVEETKEKK 85
Query: 63 -NIEVEAKTRKTGKKIAFLE 81
N+ + R T K +F E
Sbjct: 86 FNVGISVIVRVTLKDGSFHE 105
>SPBC13E7.02 |cwf24||GCN5-related N
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 23.8 bits (49), Expect = 5.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 51 SLSFYSAAKEGDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQVL 93
S F ++A + N+E ++ TG+ + V N+D +V+
Sbjct: 83 SEQFENSALKDINVEYQSNLSATGESVNTTTVSAINEDTREVI 125
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 23.8 bits (49), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 10 EHLNQRGTLHGGFIAHLVDAISTYALTTNENVDT-RGVSIDLSLS 53
+HL QRG + GG + D A NE D+ G DL LS
Sbjct: 953 DHLAQRGNMLGGIENTMDDLEEMSAEWANEIKDSLAGTKKDLILS 997
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 23.0 bits (47), Expect = 9.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 9 PEHLNQRGTLHGGFIA 24
PEH++ GT +G F+A
Sbjct: 813 PEHMHCFGTFYGPFVA 828
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 23.0 bits (47), Expect = 9.8
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 65 EVEAKTRKTGKKIAFLEVE 83
E+E++TR+ KKI +++E
Sbjct: 734 EIESRTREAKKKIMMVQLE 752
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.132 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,613
Number of Sequences: 5004
Number of extensions: 14813
Number of successful extensions: 39
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 19
length of query: 104
length of database: 2,362,478
effective HSP length: 63
effective length of query: 41
effective length of database: 2,047,226
effective search space: 83936266
effective search space used: 83936266
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 47 (23.0 bits)
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