GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000668-TA|BGIBMGA000668-PA|IPR006683|Thioesterase
superfamily
         (104 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   0.64 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   1.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   4.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    19   7.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   7.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   7.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 0.64
 Identities = 8/18 (44%), Positives = 13/18 (72%)

Query: 60  EGDNIEVEAKTRKTGKKI 77
           + D + ++ KT+KTG KI
Sbjct: 761 QSDRLMIDYKTQKTGSKI 778


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 3/42 (7%)

Query: 9   PEH-LNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSID 49
           P+H L  +GT   G+  HL   IS YA    E  DT G   D
Sbjct: 582 PQHMLLPKGT-EAGYPCHLFVMISNYADDRVEQ-DTSGTCSD 621


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 86  NKDKNQVLASGRHT 99
           N +KN V+A+GR T
Sbjct: 160 NLNKNNVVATGRFT 173


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)

Query: 22   FIAHLVDAIST 32
            FIAH+VD I T
Sbjct: 1924 FIAHVVDFIET 1934


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.4 bits (38), Expect = 7.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 47  SIDLSLSFYSAAKEGDNIEV 66
           S+D     +SAA +  NIE+
Sbjct: 81  SVDFLFDNFSAAFQDHNIEI 100


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 7.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 47  SIDLSLSFYSAAKEGDNIEV 66
           S+D     +SAA +  NIE+
Sbjct: 314 SVDFLFDNFSAAFQDHNIEI 333


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 7.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 47  SIDLSLSFYSAAKEGDNIEV 66
           S+D     +SAA +  NIE+
Sbjct: 314 SVDFLFDNFSAAFQDHNIEI 333


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.132    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,647
Number of Sequences: 317
Number of extensions: 732
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 104
length of database: 114,650
effective HSP length: 49
effective length of query: 55
effective length of database: 99,117
effective search space:  5451435
effective search space used:  5451435
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)
S2: 38 (19.4 bits)