Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000668-TA|BGIBMGA000668-PA|IPR006683|Thioesterase
superfamily
(104 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_1010 - 21704225-21704368,21706407-21706550,21706661-21706834 69 7e-13
01_06_1566 + 38283781-38283909,38283985-38284128 64 2e-11
07_03_0279 + 16211180-16211410,16211516-16211659,16212466-162125... 53 4e-08
01_01_0910 + 7175107-7175319,7175448-7175588,7175696-7175866 43 4e-05
02_04_0030 + 19041107-19041334,19041413-19041733 38 0.001
12_02_0289 - 16914975-16916238,16916246-16916484 29 0.91
08_01_0783 + 7585326-7585477,7586420-7586589,7586687-7586801,758... 28 1.2
06_03_1355 - 29522847-29523494 28 1.6
04_04_1094 - 30832987-30833316,30833530-30834273,30834484-308347... 27 2.1
02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730... 27 2.8
12_02_0277 + 16682836-16684368 27 3.7
12_02_0275 + 16662206-16663738 27 3.7
09_06_0342 + 22410674-22411060,22412219-22412299,22412376-224125... 27 3.7
11_04_0475 - 18176578-18177252,18180101-18180664 26 4.9
07_03_0285 - 16255374-16255460,16255519-16255662,16255772-16256002 26 4.9
05_06_0211 + 26401495-26402224,26402932-26403014,26403295-264033... 26 4.9
12_02_0291 + 16951154-16952740 26 6.4
12_02_0295 + 17006064-17007063,17007068-17007666 25 8.5
05_01_0448 + 3566151-3567380,3567877-3568188,3568318-3568455 25 8.5
>04_03_1010 - 21704225-21704368,21706407-21706550,21706661-21706834
Length = 153
Score = 68.9 bits (161), Expect = 7e-13
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 1 MVTEFQVGPEHLNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKE 60
++ F V P + G L G A L D + + + + + T GVS++L+LS+ A
Sbjct: 47 LLCSFVVTPRIASPAGYLLSGVTATLADQLGS-GVFLSSGIGTSGVSLELNLSYVDVASI 105
Query: 61 GDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQVLASGRHTKYIGI 104
G+ IEVE K + GK + + V+ R K +++A RHTKY+ +
Sbjct: 106 GEEIEVEGKLLRAGKSVGVVSVDFRKKKTGKLIAQARHTKYLAV 149
>01_06_1566 + 38283781-38283909,38283985-38284128
Length = 90
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 18 LHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKI 77
+HGG +A LVD + + + T GV++++++S+ AA+ + IE+EA+ G+
Sbjct: 1 MHGGAVASLVDLVGSAVFFAGGSPKT-GVTVEITVSYLDAARANEEIEMEARVLGIGETT 59
Query: 78 AFLEVEVRNKDKNQVLASGRHTKYIGI 104
+ VEVR K +VLA GR TKY+ +
Sbjct: 60 GCVTVEVRRKGAGEVLAHGRITKYLAV 86
>07_03_0279 +
16211180-16211410,16211516-16211659,16212466-16212597,
16213478-16213591
Length = 206
Score = 53.2 bits (122), Expect = 4e-08
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 7 VGPEHLNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKEGDNIEV 66
V P +N TLHGG +A + +A+ A D +LS ++ SAA+ +EV
Sbjct: 72 VSPAAVNGYNTLHGGMVAAVAEAVGM-ACARAAAGDKEMFLGELSTAYLSAARLNSEVEV 130
Query: 67 EAKTRKTGKKIAFLEVEVRNKDKNQVLASGRHTKYI 102
EA+ + G+ + VE R KD ++ S R T YI
Sbjct: 131 EAQILRKGRSVVVTTVEFRLKDTKKLCYSSRATIYI 166
>01_01_0910 + 7175107-7175319,7175448-7175588,7175696-7175866
Length = 174
Score = 43.2 bits (97), Expect = 4e-05
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 1 MVTEFQVGPEHLNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKE 60
+V F V + G H G +A VD + + T + V +I ++SF+S A
Sbjct: 60 LVCSFCVPAAVADADGRWHAGAMAAAVDNLCAAVVYTADGVHR--FTISQAMSFFSPAAH 117
Query: 61 GDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQVLASGR 97
G+ +E++ + K+ VEVR K +++A GR
Sbjct: 118 GEEVEMDGRVAHRKGKLTAAVVEVRRKASGELVAIGR 154
>02_04_0030 + 19041107-19041334,19041413-19041733
Length = 182
Score = 37.9 bits (84), Expect = 0.001
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 9 PEHLNQR-GTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAA--KEGDNIE 65
P L R G L G + LVD + + A + VS D+S+SF S A + GD +
Sbjct: 72 PSRLTDRSGCLAAGAVVSLVDEVGSAASIADGRPVK--VSTDMSVSFVSLAQARPGDRLR 129
Query: 66 VEAKTRKTGKKIAF--LEVEVRNKDKNQVLASGRHTKY 101
+ A R G K A+ V + N +V+A GRH+ +
Sbjct: 130 ITA--RALGHKGAYSATHVLISNAATGEVVAEGRHSLF 165
>12_02_0289 - 16914975-16916238,16916246-16916484
Length = 500
Score = 28.7 bits (61), Expect = 0.91
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 40 NVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIA-------FLEVEVRNKDKNQV 92
N D R + +D + ++ D IEVE T + GKK A + + +N DK++V
Sbjct: 276 NADLRKLFLDTTDKSIIVIEDIDAIEVELTTNRKGKKAANGDDKHVVIGLSDKNHDKSKV 335
Query: 93 LASG 96
SG
Sbjct: 336 TLSG 339
>08_01_0783 +
7585326-7585477,7586420-7586589,7586687-7586801,
7586887-7587055,7587185-7587319,7587409-7587728,
7587992-7588127,7588224-7588472,7588567-7588787,
7588906-7589164,7589264-7589971,7590095-7590424
Length = 987
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 16 GTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTR 71
G L G + + YA T RG+S+ ++L+ Y +E D + +E TR
Sbjct: 528 GLLMAGTASEKAGEMLAYAHDTQHEKIIRGLSLGIALTVYGREEEADTL-IEQMTR 582
>06_03_1355 - 29522847-29523494
Length = 215
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 20 GGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSA 57
GG I +L ++ A TN D +DL+L F+ A
Sbjct: 77 GGTIDYLEALVTVMARNTNSRADASFARVDLALRFHGA 114
>04_04_1094 -
30832987-30833316,30833530-30834273,30834484-30834742,
30834821-30835041,30835127-30835375,30835460-30835595,
30835864-30836207,30836589-30836758,30837080-30837185,
30837267-30837330,30838462-30838616
Length = 925
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 16 GTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTR 71
G L G + + YA T RG+S+ ++L+ Y +E D + +E TR
Sbjct: 454 GLLMVGTASEKASEMLAYAHDTQHEKIIRGLSLGIALTVYGREEEADTL-IEQMTR 508
>02_05_0873 -
32372143-32372287,32372678-32372754,32372863-32373072,
32374645-32374869
Length = 218
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 45 GVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQVLASGRHTK 100
G+SI+L AAK+ D I + K ++ LEV V++ +N + R +
Sbjct: 119 GISINLDWKIGIAAKDWDVIAKKEKIEGVELELRKLEVAVQSIHQNMIYLKAREAE 174
>12_02_0277 + 16682836-16684368
Length = 510
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 36 TTNENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKI--------AFLEVEVRNK 87
+ +N + R + +D + ++ D IEVE T++ GKK+ + VE+ NK
Sbjct: 278 SVKDNAELRKLFLDTTDKSIIVIEDIDAIEVELTTKRKGKKMDNSDEVDNNHVLVELSNK 337
Query: 88 --DKNQVLASG 96
DK++V SG
Sbjct: 338 TDDKSKVTLSG 348
>12_02_0275 + 16662206-16663738
Length = 510
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 36 TTNENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKI--------AFLEVEVRNK 87
+ +N + R + +D + ++ D IEVE T++ GKK+ + VE+ NK
Sbjct: 278 SVKDNAELRKLFLDTTDKSIIVIEDIDAIEVELTTKRKGKKMDNSDEVDNNHVLVELSNK 337
Query: 88 --DKNQVLASG 96
DK++V SG
Sbjct: 338 TDDKSKVTLSG 348
>09_06_0342 +
22410674-22411060,22412219-22412299,22412376-22412579,
22412765-22412959,22413064-22413228,22413501-22413761,
22413908-22414126,22414285-22414504,22414591-22414613,
22414728-22414766
Length = 597
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 43 TRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQV 92
T + +L+ FY+ + A +K G + F VE+R D+++V
Sbjct: 441 TASHAAELTAGFYNPCNRDGYASIAAVLKKHGAALNFTCVELRTMDQHEV 490
>11_04_0475 - 18176578-18177252,18180101-18180664
Length = 412
Score = 26.2 bits (55), Expect = 4.9
Identities = 21/75 (28%), Positives = 32/75 (42%)
Query: 3 TEFQVGPEHLNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKEGD 62
TE P+ +NQR LH +A V +I+ ++ T GV + E
Sbjct: 326 TEDDFSPKEINQRHILHEANLAPSVTSIAIFSHATPIRCLVAGVLDCNPMISQRICIEDS 385
Query: 63 NIEVEAKTRKTGKKI 77
+I V + KTG +I
Sbjct: 386 SITVLEHSLKTGWQI 400
>07_03_0285 - 16255374-16255460,16255519-16255662,16255772-16256002
Length = 153
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 7 VGPEHLNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAK 59
V P +N TLHGG +A + + + A D +LS ++ SAA+
Sbjct: 72 VSPAAVNAYNTLHGGMVAAVAEVVG-MACARAAAGDKEMFLGELSAAYLSAAR 123
>05_06_0211 +
26401495-26402224,26402932-26403014,26403295-26403369,
26403442-26403513,26403684-26403764,26403946-26404043,
26404694-26404819,26404931-26404979,26405352-26405547,
26406475-26406491,26406786-26406839,26406845-26407036
Length = 590
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 46 VSIDLSLSFYSAAKEGDNIEVEAK-TRKTGKKI 77
+S DLSL+FY A+ G +I + + + +TG+K+
Sbjct: 519 LSFDLSLAFYPASVLGSSIFRDTEYSSRTGRKL 551
>12_02_0291 + 16951154-16952740
Length = 528
Score = 25.8 bits (54), Expect = 6.4
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 36 TTNENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIA----------FLEVEVR 85
+ N + R + +D + ++ D IEVE T++ GKK A +E +
Sbjct: 278 SVKNNSELRKLFLDTTDKSIIVIEDIDAIEVELTTKRKGKKAANGDEIHDKRMLIEFSDK 337
Query: 86 NKDKNQVLASG 96
N +K++V SG
Sbjct: 338 NDEKSKVTLSG 348
>12_02_0295 + 17006064-17007063,17007068-17007666
Length = 532
Score = 25.4 bits (53), Expect = 8.5
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 35 LTTNENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIAFLEVEVRNK 87
++ N + R + +D + ++ D IE E T++ G K+ + E+R+K
Sbjct: 277 ISVKNNSELRKLFLDTTDKSIIVIEDIDAIEDELTTKRKGNKVVNGDDEIRDK 329
>05_01_0448 + 3566151-3567380,3567877-3568188,3568318-3568455
Length = 559
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 74 GKKIAFLEVEVRNKDKNQVLASGRHTKYIG 103
GKK +EV++R K+ N G H Y G
Sbjct: 375 GKKRPLMEVQIRTKEMNDAAVFG-HALYKG 403
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.132 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,663,177
Number of Sequences: 37544
Number of extensions: 85822
Number of successful extensions: 162
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 144
Number of HSP's gapped (non-prelim): 20
length of query: 104
length of database: 14,793,348
effective HSP length: 72
effective length of query: 32
effective length of database: 12,090,180
effective search space: 386885760
effective search space used: 386885760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 53 (25.4 bits)
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