Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000668-TA|BGIBMGA000668-PA|IPR006683|Thioesterase
superfamily
(104 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38430| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 1e-17
SB_53116| Best HMM Match : Pkinase (HMM E-Value=1.9e-09) 31 0.23
SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28) 30 0.31
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_31970| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_37761| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 27 3.8
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.0
SB_23024| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.0
SB_10601| Best HMM Match : MFS_1 (HMM E-Value=0.017) 26 5.0
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 26 6.7
SB_46538| Best HMM Match : A2M (HMM E-Value=2.3e-29) 26 6.7
SB_52782| Best HMM Match : ADP_ribosyl_GH (HMM E-Value=0) 25 8.8
SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0) 25 8.8
SB_51284| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_35245| Best HMM Match : DUF26 (HMM E-Value=2.4) 25 8.8
>SB_38430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 85.0 bits (201), Expect = 1e-17
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 2 VTEFQVGPEHLNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKEG 61
+ + V EH N+ GTLHGG A +VD ++T A+ + GVS+D+++S+ AA G
Sbjct: 40 IIKMTVSQEHENRMGTLHGGLTATMVDDVTTMAIISQTG--QAGVSVDMNISYLKAACRG 97
Query: 62 DNIEVEAKTRKTGKKIAFLEVEVRNKDKNQVLASGRHTKYIG 103
D + E K GK +AF E++ KD VLA G+HTKYIG
Sbjct: 98 DEVIFEGICNKAGKNLAFSTAEIKLKD-GTVLAMGKHTKYIG 138
>SB_53116| Best HMM Match : Pkinase (HMM E-Value=1.9e-09)
Length = 481
Score = 30.7 bits (66), Expect = 0.23
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 35 LTTNENVDTRGVSIDLSLSFYSAAKE-GDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQVL 93
+ T +V R L+ S ++ K NI +KT+ + LE ++RNKD N L
Sbjct: 363 VNTESSVSERNSKSSLATSTFAVPKMLFTNICSLSKTKNRVRAAVALEADLRNKDINICL 422
Query: 94 ASGRHTK 100
S H K
Sbjct: 423 VSETHLK 429
>SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28)
Length = 552
Score = 30.3 bits (65), Expect = 0.31
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 28 DAISTYALTTNENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKT 73
D +S T + DTR +DL + +S+ K+ ++ EV+ +T KT
Sbjct: 413 DQVSRRGALTGGHYDTRKSRLDLQRTIWSSGKKVEDEEVQLQTIKT 458
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 65 EVEAKTRKTGKKIAFLEVEVRNKD 88
+VE R +G K+ F V+V NKD
Sbjct: 63 QVETDLRSSGNKVKFYHVDVANKD 86
>SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1181
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 56 SAAKEGDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQVLASGRHTKYIG 103
S A+ GD+ K+ + E E+ K KN SGRH+++ G
Sbjct: 444 SLARAGDSRSKSEKSEDVRQLETIRERELAEKKKNAKKFSGRHSRFGG 491
>SB_31970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 27.1 bits (57), Expect = 2.9
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 45 GVSIDLS-LSFYSAAKEGDNI--EVEAKTRKTGKKIAFLEVEVRNKDKNQVLASG 96
GV+ID++ L Y + +G ++ E+E R+T KK+ FL ++ +K + +G
Sbjct: 21 GVNIDVTQLQNYPSLLDGLDVATELEGLRRQTAKKLVFLIDTIQGVEKKTLDQTG 75
>SB_37761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 26 LVDAISTYALTTNENVDTRGVSIDL-SLSFYSA 57
+VD + + T E VD+RGV D S++ Y A
Sbjct: 463 VVDMVDNFIAETPEEVDSRGVGYDYESVTHYGA 495
>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
Length = 991
Score = 26.6 bits (56), Expect = 3.8
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 14 QRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAA---KEGDNIEVEAKT 70
Q +L+G + A A+S + +V S D+ F A KEG++ +VE+K
Sbjct: 612 QLRSLNGEWDAPCSGALSAAGVVVTRSVTATLASADVRRCFCRYAPPRKEGEDQDVESKA 671
Query: 71 RKTGKKIAFLEVEVRNKDKNQVLASGRHTKYI 102
A EV V K ++ H + +
Sbjct: 672 DSGESTTAPQEVPVEEPKKVEIPIDASHPEVV 703
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 38 NENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQVLAS 95
N +VD + +SI S+S + E + E +AK+ GK ++ +VE + D ++++ +
Sbjct: 587 NNDVDEQ-ISIHSSISTDGLSPEHTDSE-QAKSSVNGKSLSLEDVEEQVSDSSEIIGN 642
>SB_23024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 47 SIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQV 92
S D L + ++ ++IEV KT ++ LE+E NK +N++
Sbjct: 210 SADKELEYVKKQRDLESIEVGRKTASLESQVTKLEIENYNK-QNEI 254
>SB_10601| Best HMM Match : MFS_1 (HMM E-Value=0.017)
Length = 541
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 13 NQRGTLHGGFIAHLVDAISTYALTTNENVDTRGV 46
N GT+ GGF+ H V A +T+ ++ T G+
Sbjct: 476 NGSGTIAGGFLYHYVGAATTFHYLAAGSLVTLGL 509
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 67 EAKTRKTGKKIAFLEVEVRNKDKNQV-LASGRHTK 100
+ K + GK+I +E E K+K Q+ LA +T+
Sbjct: 414 DEKIKALGKRILEMEAEAETKEKEQMKLAQSNYTR 448
>SB_46538| Best HMM Match : A2M (HMM E-Value=2.3e-29)
Length = 399
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 72 KTGKKIAFLEVEVRNKDKNQVLA 94
K K + FLE E+ N K Q+LA
Sbjct: 324 KVAKAVHFLEQEINNLQKPQILA 346
>SB_52782| Best HMM Match : ADP_ribosyl_GH (HMM E-Value=0)
Length = 487
Score = 25.4 bits (53), Expect = 8.8
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 10 EHLNQRGTLHGGFIAHLVDAIST-YAL 35
E L RG HGG++ L A+ T YA+
Sbjct: 290 EELCHRGMFHGGYLGSLAAALFTSYAI 316
>SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2195
Score = 25.4 bits (53), Expect = 8.8
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 31 STYALTTNENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIAFLEVEVRNKDKN 90
ST+A+ T T V +D+ L F S EG + V A+T + G +++ E +
Sbjct: 1111 STHAILTGLKKYTEYV-MDV-LGFTSIG-EGPSARVTARTSQDGYVVSYFNTETDGYNWT 1167
Query: 91 QVLASGRHTKY 101
+V R T Y
Sbjct: 1168 EVSVGKRTTSY 1178
>SB_51284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 63 NIEVEAKTRKTGKKIAFLEVEVRNKDKNQVLASGRHTK 100
NI +KT+ + LE ++RNKD + L S H K
Sbjct: 5 NICSLSKTKNRVRAAVALEADLRNKDIDICLVSETHLK 42
>SB_35245| Best HMM Match : DUF26 (HMM E-Value=2.4)
Length = 290
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 10 EHLNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVS 47
++ Q GT F LVD + T A++T +DT VS
Sbjct: 200 QYFLQGGTSIRRFSLTLVDTLDTLAVSTYSVIDTLAVS 237
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.132 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,109,678
Number of Sequences: 59808
Number of extensions: 100509
Number of successful extensions: 206
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 194
Number of HSP's gapped (non-prelim): 17
length of query: 104
length of database: 16,821,457
effective HSP length: 72
effective length of query: 32
effective length of database: 12,515,281
effective search space: 400488992
effective search space used: 400488992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 53 (25.4 bits)
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