GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000667-TA|BGIBMGA000667-
PA|IPR004825|Insulin/IGF/relaxin, IPR004824|Bombyxin,
IPR003234|Insulin-related peptide
         (131 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)                    30   0.70 
SB_21009| Best HMM Match : Insulin (HMM E-Value=7.5e-06)               29   1.2  
SB_18415| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.8  
SB_10135| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.8  
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.8  
SB_30877| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   8.7  
SB_26118| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   8.7  
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)                     26   8.7  

>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
          Length = 1636

 Score = 29.9 bits (64), Expect = 0.70
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 14  IMPTFKMFLLYFLIVVAL--VSADVHDKELKIEENPRVYCGRHLANA 58
           I  T  + L+  L+V AL  V   VH+KE K+++    +   HL NA
Sbjct: 245 IQQTLPLLLMLSLVVTALYIVKDIVHEKERKLKDGDNDFHNGHLPNA 291


>SB_21009| Best HMM Match : Insulin (HMM E-Value=7.5e-06)
          Length = 122

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 12/84 (14%)

Query: 51  CGRHLANARMVLCYD---TVEKRAQSYLDANIISAGDLSSWPGLSSQYAKTRAFALAEKS 107
           CG  +++A  ++CY    T  +R  +  D +I+ + D +      +Q  K  +       
Sbjct: 48  CGDQISDAWTIICYGGGVTARQRQINRRDLSIVQSADEARQFNSKTQRGKRSSIYT---- 103

Query: 108 KRGPGLVDECCLKPCYTYDLLNYC 131
                + +ECC++ C   ++  YC
Sbjct: 104 -----ITEECCVEGCKQEEIREYC 122


>SB_18415| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 623

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 23 LYFLIVVALVSADVHDKELKIEENPRVYCGR 53
          L F+IV       V  KE+++E+ P  YCGR
Sbjct: 7  LLFIIVTLSAVHQVLGKEVELEKCPGQYCGR 37


>SB_10135| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 248

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)

Query: 114 VDECC----LKPCYTYDLLNYC 131
           +D CC    L PCYTY LL+ C
Sbjct: 162 LDSCCTYRFLDPCYTYRLLDPC 183


>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 514

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 71  AQSYLDANIISAGDLSSWPGLSSQYAKTRAFALAEKSKRG 110
           ++  LD N+ S G+L S   +   Y + RA +L++   RG
Sbjct: 430 SEGILDLNVFSRGELLSGFPIEITYVRGRAVSLSDPVPRG 469


>SB_30877| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 48

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 94  QYAKTRAFALAEKSKRGPGLVDECCLKPCYTYDLLNYC 131
           +YAK+  F    +S     + +ECC++ C   ++  YC
Sbjct: 13  EYAKS--FLRVRRSGSSTDINEECCVEGCAQEEINEYC 48


>SB_26118| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 126

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 86  SSWPGLSSQYAKTRAFALAEKSKRGPGLVD 115
           SS P LS+  A  RAF  A++  RG   VD
Sbjct: 8   SSVPSLSATTATCRAFLQADRRYRGSSRVD 37


>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 937

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 41  LKIEENPRVYCGRHLANARMVLCYDTVEKRAQSYLDANIISAGDLS 86
           L  E  P V C R +   RM LC  T    + SY    +I + DLS
Sbjct: 757 LSNENEPYVVCHRFICQCRMSLCCVTTCHMSVSY----VIVSSDLS 798


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.324    0.137    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,094,856
Number of Sequences: 59808
Number of extensions: 145434
Number of successful extensions: 413
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 409
Number of HSP's gapped (non-prelim): 9
length of query: 131
length of database: 16,821,457
effective HSP length: 75
effective length of query: 56
effective length of database: 12,335,857
effective search space: 690807992
effective search space used: 690807992
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 55 (26.2 bits)