GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000667-TA|BGIBMGA000667-
PA|IPR004825|Insulin/IGF/relaxin, IPR004824|Bombyxin,
IPR003234|Insulin-related peptide
         (131 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81506-4|CAB04131.1|  191|Caenorhabditis elegans Hypothetical pr...    31   0.20 
Z81065-3|CAH04732.1|  358|Caenorhabditis elegans Hypothetical pr...    27   3.3  
Z83227-1|CAB05728.1|  274|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z70683-4|CAC42282.1|  109|Caenorhabditis elegans Hypothetical pr...    26   10.0 
U64843-11|AAL08038.1|  365|Caenorhabditis elegans Hypothetical p...    26   10.0 
AF070472-1|AAC33275.1|  109|Caenorhabditis elegans insulin-like ...    26   10.0 

>Z81506-4|CAB04131.1|  191|Caenorhabditis elegans Hypothetical
           protein F16H6.5 protein.
          Length = 191

 Score = 31.5 bits (68), Expect = 0.20
 Identities = 18/48 (37%), Positives = 23/48 (47%)

Query: 38  DKELKIEENPRVYCGRHLANARMVLCYDTVEKRAQSYLDANIISAGDL 85
           DK+ KI E  RV C      AR  +  + V K    Y+D+N    GDL
Sbjct: 116 DKKGKIPEGGRVKCAGTETGARSNVKCEEVAKEVNEYIDSNKDKFGDL 163


>Z81065-3|CAH04732.1|  358|Caenorhabditis elegans Hypothetical
          protein F16C3.3 protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 30 ALVSADVHDKELKIEENPRVYCGRHLANARM 60
          A +S+D   K ++I  +PRVY G   AN R+
Sbjct: 8  ATISSDFLRKPVQITADPRVYKGSVFANRRL 38


>Z83227-1|CAB05728.1|  274|Caenorhabditis elegans Hypothetical
          protein F45B8.1 protein.
          Length = 274

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 9/20 (45%), Positives = 17/20 (85%)

Query: 27 IVVALVSADVHDKELKIEEN 46
          I  A+++ADV++K LK+++N
Sbjct: 11 IFPAIINADVYEKNLKVDDN 30


>Z70683-4|CAC42282.1|  109|Caenorhabditis elegans Hypothetical
           protein F13B12.5 protein.
          Length = 109

 Score = 25.8 bits (54), Expect = 10.0
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 101 FALAEKSKRGPGLVDECCLKPCYTYDLLNYC 131
           F +  + KRG G+  ECC K C    L  +C
Sbjct: 74  FHIHHQQKRG-GIATECCEKRCSFAYLKTFC 103


>U64843-11|AAL08038.1|  365|Caenorhabditis elegans Hypothetical
           protein K06C4.17 protein.
          Length = 365

 Score = 25.8 bits (54), Expect = 10.0
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 2   TLFGATKAIQEKIMPTFKMFLLYFLIVVALV 32
           T     + ++E +   FK+F L F+I V+++
Sbjct: 223 TFLKVVQYVEENVFSVFKIFFLLFIINVSII 253


>AF070472-1|AAC33275.1|  109|Caenorhabditis elegans insulin-like
           peptide protein.
          Length = 109

 Score = 25.8 bits (54), Expect = 10.0
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 101 FALAEKSKRGPGLVDECCLKPCYTYDLLNYC 131
           F +  + KRG G+  ECC K C    L  +C
Sbjct: 74  FHIHHQQKRG-GIATECCEKRCSFAYLKTFC 103


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.324    0.137    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,043,368
Number of Sequences: 27539
Number of extensions: 108403
Number of successful extensions: 293
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 289
Number of HSP's gapped (non-prelim): 6
length of query: 131
length of database: 12,573,161
effective HSP length: 74
effective length of query: 57
effective length of database: 10,535,275
effective search space: 600510675
effective search space used: 600510675
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 54 (25.8 bits)