Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000666-TA|BGIBMGA000666-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal,
IPR011074|Phosphatidylinositol transfer protein-like, N-terminal
         (263 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.2  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 193 PTLYGGKLELREMIEYTKQILKEQKEN---VLALDNMEILSTRGIISSRGXXXXXXXXED 249
           P  Y  K   R +  +TK ++ E++EN   ++  +  E+ + +  ++           E 
Sbjct: 236 PRYYLEKKVTRRLHRFTKSVIAERQENFKEIVVPETDEVYTGKRRLAMLDLLLTAKNKEG 295

Query: 250 LISVEG 255
           LI  EG
Sbjct: 296 LIDDEG 301


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 193 PTLYGGKLELREMIEYTKQILKEQKEN---VLALDNMEILSTRGIISSRGXXXXXXXXED 249
           P  Y  K   R +  +TK ++ E++EN   ++  +  E+ + +  ++           E 
Sbjct: 236 PRYYLEKKVTRRLHRFTKSVIAERQENFKEIVVPETDEVYTGKRRLAMLDLLLTAKNKEG 295

Query: 250 LISVEG 255
           LI  EG
Sbjct: 296 LIDDEG 301


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query: 199 KLELREMIEYTKQILKEQKENVL 221
           +L + E ++YTK ++  Q  N+L
Sbjct: 767 RLGIDESVDYTKPLVDAQTMNLL 789


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.133    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,765
Number of Sequences: 317
Number of extensions: 2034
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 263
length of database: 114,650
effective HSP length: 56
effective length of query: 207
effective length of database: 96,898
effective search space: 20057886
effective search space used: 20057886
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)