GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000665-TA|BGIBMGA000665-PA|undefined
         (205 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC129993-1|AAI29994.1| 1139|Homo sapiens otoancorin protein.           47   4e-05
BC129931-1|AAI29932.1| 1002|Homo sapiens STRC protein protein.         47   4e-05
AL445212-3|CAI40478.1| 3013|Homo sapiens furry homolog (Drosophi...    30   6.5  
AL138692-1|CAI13379.1| 3013|Homo sapiens furry homolog (Drosophi...    30   6.5  
AL137143-1|CAI12629.1| 3013|Homo sapiens furry homolog (Drosophi...    30   6.5  
AL049784-1|CAB42442.1| 3012|Homo sapiens hypothetical protein pr...    30   6.5  
AC002483-1|AAC35295.1| 1849|Homo sapiens WUGSC:H_248O15.1 protein.     30   6.5  

>BC129993-1|AAI29994.1| 1139|Homo sapiens otoancorin protein.
          Length = 1139

 Score = 47.2 bits (107), Expect = 4e-05
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 4/145 (2%)

Query: 45   LMNLHWVTTAVMPEDYANITLSNIDVVNNFGLNYNLNEEQLNALAARVREDYAGKEPEDY 104
            +++L  +  A+   +   + LS+ID V +          Q  ++     +D +G   +D 
Sbjct: 886  IVSLGRIALALNESELEQLDLSSIDTVASLSWQTEWTPGQAESILQGYLDD-SGYSIQDL 944

Query: 105  TYYDLTALNQILCAFNKSEIERIHPVAYRETVLMIGKLQNCNPDVMRGFATLAMDKNAFG 164
              + L  L   LCA N +EI  I    +R  V  IG L  C+  V+  F   A  +  FG
Sbjct: 945  KSFHLVGLGATLCAINITEIPLIKISEFRVVVARIGTLL-CSTHVLAEFKRKA--EVVFG 1001

Query: 165  SLENWNKNIMNLLGKVAECIPKEFL 189
                W  +++  LG +A  + K  L
Sbjct: 1002 DPTEWTSSVLQELGTIAAGLTKAAL 1026


>BC129931-1|AAI29932.1| 1002|Homo sapiens STRC protein protein.
          Length = 1002

 Score = 47.2 bits (107), Expect = 4e-05
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 97  AGKEPEDYTYYDLTALNQILCAFNKSEIERIHPVAYRETVLMIGKLQ-NCNPDVMRGFAT 155
           +G+      +  LTAL   LC     E++ I    + +  L +G L   C+ + +   A 
Sbjct: 806 SGRHVSHLDFVHLTALGYTLCGLRPEELQHISSWEFSQAALFLGTLHLQCSEEQLEVLAH 865

Query: 156 LAMDKNAFGSLENWNKNIMNLLGKVAECIP 185
           L +    FG + NW   I   +G +A  IP
Sbjct: 866 LLVLPGGFGPISNWGPEIFTEIGTIAAGIP 895


>AL445212-3|CAI40478.1| 3013|Homo sapiens furry homolog (Drosophila)
            protein.
          Length = 3013

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 39   NIPNNVLMNLHWVTTAVMPEDYANITLSNIDVVN----NFGLNYNLNEEQLNALAARVR- 93
            N P N+L  + WVT A+M  D+    L  + +++    +  L+   N E+L  L A+++ 
Sbjct: 2035 NHPTNLLATIFWVTVALMESDFEFEYLMALRLLSRLLAHMPLDKAENREKLEKLQAQLKW 2094

Query: 94   EDYAG 98
             D++G
Sbjct: 2095 ADFSG 2099


>AL138692-1|CAI13379.1| 3013|Homo sapiens furry homolog (Drosophila)
            protein.
          Length = 3013

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 39   NIPNNVLMNLHWVTTAVMPEDYANITLSNIDVVN----NFGLNYNLNEEQLNALAARVR- 93
            N P N+L  + WVT A+M  D+    L  + +++    +  L+   N E+L  L A+++ 
Sbjct: 2035 NHPTNLLATIFWVTVALMESDFEFEYLMALRLLSRLLAHMPLDKAENREKLEKLQAQLKW 2094

Query: 94   EDYAG 98
             D++G
Sbjct: 2095 ADFSG 2099


>AL137143-1|CAI12629.1| 3013|Homo sapiens furry homolog (Drosophila)
            protein.
          Length = 3013

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 39   NIPNNVLMNLHWVTTAVMPEDYANITLSNIDVVN----NFGLNYNLNEEQLNALAARVR- 93
            N P N+L  + WVT A+M  D+    L  + +++    +  L+   N E+L  L A+++ 
Sbjct: 2035 NHPTNLLATIFWVTVALMESDFEFEYLMALRLLSRLLAHMPLDKAENREKLEKLQAQLKW 2094

Query: 94   EDYAG 98
             D++G
Sbjct: 2095 ADFSG 2099


>AL049784-1|CAB42442.1| 3012|Homo sapiens hypothetical protein
            protein.
          Length = 3012

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 39   NIPNNVLMNLHWVTTAVMPEDYANITLSNIDVVN----NFGLNYNLNEEQLNALAARVR- 93
            N P N+L  + WVT A+M  D+    L  + +++    +  L+   N E+L  L A+++ 
Sbjct: 2034 NHPTNLLATIFWVTVALMESDFEFEYLMALRLLSRLLAHMPLDKAENREKLEKLQAQLKW 2093

Query: 94   EDYAG 98
             D++G
Sbjct: 2094 ADFSG 2098


>AC002483-1|AAC35295.1| 1849|Homo sapiens WUGSC:H_248O15.1 protein.
          Length = 1849

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 39   NIPNNVLMNLHWVTTAVMPEDYANITLSNIDVVN----NFGLNYNLNEEQLNALAARVR- 93
            N P N+L  + WVT A+M  D+    L  + +++    +  L+   N E+L  L A+++ 
Sbjct: 1439 NHPTNLLATIFWVTVALMESDFEFEYLMALRLLSRLLAHMPLDKAENREKLEKLQAQLKW 1498

Query: 94   EDYAG 98
             D++G
Sbjct: 1499 ADFSG 1503


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.317    0.132    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,983,221
Number of Sequences: 224733
Number of extensions: 1059681
Number of successful extensions: 1970
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1969
Number of HSP's gapped (non-prelim): 8
length of query: 205
length of database: 73,234,838
effective HSP length: 87
effective length of query: 118
effective length of database: 53,683,067
effective search space: 6334601906
effective search space used: 6334601906
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)