Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000665-TA|BGIBMGA000665-PA|undefined
(205 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077544-4|ABD94098.1| 348|Caenorhabditis elegans Hypothetical ... 34 0.063
AF077544-3|AAK39242.3| 458|Caenorhabditis elegans Hypothetical ... 34 0.063
AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein. 29 2.4
AC006708-13|AAF60415.1| 788|Caenorhabditis elegans Metaphase-to... 29 2.4
Z68317-4|CAA92688.1| 486|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z78539-3|CAB01729.2| 410|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF099914-10|AAC68764.1| 469|Caenorhabditis elegans Hypothetical... 27 9.5
>AF077544-4|ABD94098.1| 348|Caenorhabditis elegans Hypothetical
protein H22K11.4b protein.
Length = 348
Score = 34.3 bits (75), Expect = 0.063
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 10 LAHLGKEELSKDAAQFIWQTLVTHHEGIANIPNNVLMNLHWVTTAVMPEDYANITLSNID 69
+ ++G ++ I L T E +N P++V+MN ++ T P D+ N+ + NI
Sbjct: 84 MVYVGTQQKFYPGTMSIVHNLQTMPEFCSN-PSSVVMNKYFAPT--FPVDWCNVAVRNIS 140
Query: 70 VVNNFGLNYNLNEEQLNALAARVREDYAGKEPE 102
+ G++ + +EQ L + ++PE
Sbjct: 141 SLEGEGIDELIKDEQEEKLTKANPDQNLNEKPE 173
>AF077544-3|AAK39242.3| 458|Caenorhabditis elegans Hypothetical
protein H22K11.4a protein.
Length = 458
Score = 34.3 bits (75), Expect = 0.063
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 10 LAHLGKEELSKDAAQFIWQTLVTHHEGIANIPNNVLMNLHWVTTAVMPEDYANITLSNID 69
+ ++G ++ I L T E +N P++V+MN ++ T P D+ N+ + NI
Sbjct: 194 MVYVGTQQKFYPGTMSIVHNLQTMPEFCSN-PSSVVMNKYFAPT--FPVDWCNVAVRNIS 250
Query: 70 VVNNFGLNYNLNEEQLNALAARVREDYAGKEPE 102
+ G++ + +EQ L + ++PE
Sbjct: 251 SLEGEGIDELIKDEQEEKLTKANPDQNLNEKPE 283
>AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein.
Length = 788
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 8 QCLAHLGKEELSKDAAQFIWQTLVTHHEGIANIPNNVLMNLHWVTTAVMPEDYANITLSN 67
+CL L K + S FI+ L H + N + L+N W + P NIT SN
Sbjct: 715 ECLVELDKLKASSPDEAFIFHLLARVHRRMGN-THLALLNYSW-AAELDPRGEQNITDSN 772
Query: 68 I 68
+
Sbjct: 773 V 773
>AC006708-13|AAF60415.1| 788|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform a protein.
Length = 788
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 8 QCLAHLGKEELSKDAAQFIWQTLVTHHEGIANIPNNVLMNLHWVTTAVMPEDYANITLSN 67
+CL L K + S FI+ L H + N + L+N W + P NIT SN
Sbjct: 715 ECLVELDKLKASSPDEAFIFHLLARVHRRMGN-THLALLNYSW-AAELDPRGEQNITDSN 772
Query: 68 I 68
+
Sbjct: 773 V 773
>Z68317-4|CAA92688.1| 486|Caenorhabditis elegans Hypothetical
protein T01H3.4 protein.
Length = 486
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 29 TLVTHHEGIANIPN-----NVLMNLHWVTTAVMPEDYANITLSNIDVVNN 73
T + +H G+ N+PN +V++NLH T + D A + + N++VV +
Sbjct: 46 TCLRYH-GMKNLPNALLAADVVVNLHECTDFSLLPDVAKLQMHNVEVVRS 94
>Z78539-3|CAB01729.2| 410|Caenorhabditis elegans Hypothetical
protein C31E10.3 protein.
Length = 410
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query: 80 LNEEQLNALAARVREDYAGKEPEDYTYYDLTALNQILCAFNKSEIERIHPVAYRETVLMI 139
+N +L+A +YA + Y + +L I FN++ IE Y+ M
Sbjct: 143 VNNSRLDASLLCENNNYAAFDVI-YVHKNLKDCGCIGTVFNENNIEN-----YKNCTAMF 196
Query: 140 GKLQNCNPDVMRGFATLAMDKNAFGSLENWNKNIMNL 176
G ++ N + F+ L+ +N G L N N N+
Sbjct: 197 GTMEFDNTSQISKFSALSNMRNITGKLIVHNTNFQNI 233
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 97 AGKEPEDYTYYDLTALNQILCAFNKSEIERIHPVAYRETVLMIG-KLQNCNPDV 149
+G P+ YT Y L+Q +C +E++ + P A + + + C P+V
Sbjct: 714 SGGCPDGYTCYSSPLLDQNVCCGASTELQSLCPAASTPFISALSLQPMQCTPNV 767
>AF099914-10|AAC68764.1| 469|Caenorhabditis elegans Hypothetical
protein C40A11.9 protein.
Length = 469
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 165 SLENWNKNIM---NLLGKVAECIPKEFLESKKIISNVES 200
+L N NK ++ +LLGK +CI ++ + +K I N+ S
Sbjct: 5 NLNNANKFMILKTHLLGKARDCISRDHVAAKAIEKNIAS 43
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,136,332
Number of Sequences: 27539
Number of extensions: 202260
Number of successful extensions: 480
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 480
Number of HSP's gapped (non-prelim): 8
length of query: 205
length of database: 12,573,161
effective HSP length: 78
effective length of query: 127
effective length of database: 10,425,119
effective search space: 1323990113
effective search space used: 1323990113
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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