Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000664-TA|BGIBMGA000664-PA|IPR008506|Protein of unknown
function DUF788
         (176 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070929-1|AAL48551.1|  174|Drosophila melanogaster RE03116p pro...   126   2e-29
AE013599-2152|AAF58083.1|  174|Drosophila melanogaster CG8320-PA...   126   2e-29
BT023382-1|AAY55798.1|  265|Drosophila melanogaster IP10372p pro...    28   6.2  
BT023334-1|AAY55750.1|  265|Drosophila melanogaster IP10172p pro...    28   6.2  
AE014297-1054|AAF54463.2|  265|Drosophila melanogaster CG9459-PA...    28   6.2  

>AY070929-1|AAL48551.1|  174|Drosophila melanogaster RE03116p
           protein.
          Length = 174

 Score =  126 bits (304), Expect = 2e-29
 Identities = 58/135 (42%), Positives = 93/135 (68%), Gaps = 2/135 (1%)

Query: 16  QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 75
           QI+ EN  T+ FYRNM++   +   +++ L +   ++   +F ++L L+I  + YQ M +
Sbjct: 16  QIVEENKTTLTFYRNMAIGCAAPALLLSFLVF--EVTKTSVFMHILSLLILGSSYQFMAF 73

Query: 76  ISKPRYLNNTQLLDPGLDLNMEGGMGEHIKDIVILSSITQVLALINNYFWLLLLILPIRV 135
           +S+ +Y  +  LLD G DLNMEGG+ E++KD++IL+S T +LALI+NYFWL+LL+ PIR 
Sbjct: 74  MSQAKYSESGALLDSGNDLNMEGGIAENVKDLIILTSGTLLLALISNYFWLVLLLAPIRA 133

Query: 136 FWLLWTNILGPWFFQ 150
            W+LW +++ PW  Q
Sbjct: 134 GWMLWGSVIQPWLSQ 148


>AE013599-2152|AAF58083.1|  174|Drosophila melanogaster CG8320-PA
           protein.
          Length = 174

 Score =  126 bits (304), Expect = 2e-29
 Identities = 58/135 (42%), Positives = 93/135 (68%), Gaps = 2/135 (1%)

Query: 16  QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 75
           QI+ EN  T+ FYRNM++   +   +++ L +   ++   +F ++L L+I  + YQ M +
Sbjct: 16  QIVEENKTTLTFYRNMAIGCAAPALLLSFLVF--EVTKTSVFMHILSLLILGSSYQFMAF 73

Query: 76  ISKPRYLNNTQLLDPGLDLNMEGGMGEHIKDIVILSSITQVLALINNYFWLLLLILPIRV 135
           +S+ +Y  +  LLD G DLNMEGG+ E++KD++IL+S T +LALI+NYFWL+LL+ PIR 
Sbjct: 74  MSQAKYSESGALLDSGNDLNMEGGIAENVKDLIILTSGTLLLALISNYFWLVLLLAPIRA 133

Query: 136 FWLLWTNILGPWFFQ 150
            W+LW +++ PW  Q
Sbjct: 134 GWMLWGSVIQPWLSQ 148


>BT023382-1|AAY55798.1|  265|Drosophila melanogaster IP10372p
           protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 100 MGEHIKDIVILSSITQVLALINNYFWLLLLILPIRVFWLLWTNILGPWFFQ 150
           M  H+ D +  S    V   + +  W +L IL I   +L++  I+GPWF Q
Sbjct: 1   MFAHMLDFLNRSPPDPVRLPLTSSHWPVLTILGI---YLVFIKIVGPWFMQ 48


>BT023334-1|AAY55750.1|  265|Drosophila melanogaster IP10172p
           protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 100 MGEHIKDIVILSSITQVLALINNYFWLLLLILPIRVFWLLWTNILGPWFFQ 150
           M  H+ D +  S    V   + +  W +L IL I   +L++  I+GPWF Q
Sbjct: 1   MFAHMLDFLNRSPPDPVRLPLTSSHWPVLTILGI---YLVFIKIVGPWFMQ 48


>AE014297-1054|AAF54463.2|  265|Drosophila melanogaster CG9459-PA
           protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 100 MGEHIKDIVILSSITQVLALINNYFWLLLLILPIRVFWLLWTNILGPWFFQ 150
           M  H+ D +  S    V   + +  W +L IL I   +L++  I+GPWF Q
Sbjct: 1   MFAHMLDFLNRSPPDPVRLPLTSSHWPVLTILGI---YLVFIKIVGPWFMQ 48


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.331    0.144    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,270,025
Number of Sequences: 52641
Number of extensions: 224504
Number of successful extensions: 545
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 541
Number of HSP's gapped (non-prelim): 5
length of query: 176
length of database: 24,830,863
effective HSP length: 80
effective length of query: 96
effective length of database: 20,619,583
effective search space: 1979479968
effective search space used: 1979479968
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 59 (27.9 bits)