GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000664-TA|BGIBMGA000664-PA|IPR008506|Protein of unknown
function DUF788
         (176 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   3.3  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   5.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   5.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   9.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   9.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   9.9  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 100 MGEHIKDIVILSSITQVLALINNYFWLLLLILPIRVFWLLW 140
           + +HI +I + +    VL L        L ++P RVF +LW
Sbjct: 273 LNKHIDNISLRARKQVVLMLGTVVLSFFLCLIPFRVF-ILW 312


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query: 38  FYGIITALFYYENISNWVLFFN 59
           F+  +T++ + +  S W LF N
Sbjct: 100 FHSFMTSVLFSQVASRWPLFLN 121


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 6/19 (31%), Positives = 13/19 (68%)

Query: 73  MMYISKPRYLNNTQLLDPG 91
           ++ ++ P+Y  N  ++DPG
Sbjct: 143 VLNLTMPKYEPNPSIIDPG 161


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 6/19 (31%), Positives = 13/19 (68%)

Query: 73  MMYISKPRYLNNTQLLDPG 91
           ++ ++ P+Y  N  ++DPG
Sbjct: 143 VLNLTMPKYEPNPSIIDPG 161


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)

Query: 139 LWTNILGPWFFQE 151
           +WT+ILG  +F+E
Sbjct: 132 VWTDILGFGYFRE 144


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 94  LNMEGGMGEHIKDIVILSSITQVLALINN 122
           L+M GGM +        SS+T  LA  N+
Sbjct: 199 LDMSGGMHQMANYSTDYSSLTHSLAASNH 227


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/29 (24%), Positives = 15/29 (51%)

Query: 31  MSMAATSFYGIITALFYYENISNWVLFFN 59
           +++   SFY  I+  FY+    N +  ++
Sbjct: 232 LTIFGVSFYFFISTFFYFFTTGNIIATYD 260


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/29 (24%), Positives = 15/29 (51%)

Query: 31  MSMAATSFYGIITALFYYENISNWVLFFN 59
           +++   SFY  I+  FY+    N +  ++
Sbjct: 228 LTIFGVSFYFFISTFFYFFTTGNIIATYD 256


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.331    0.144    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,785
Number of Sequences: 317
Number of extensions: 1464
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 176
length of database: 114,650
effective HSP length: 53
effective length of query: 123
effective length of database: 97,849
effective search space: 12035427
effective search space used: 12035427
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 40 (20.2 bits)