GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000664-TA|BGIBMGA000664-PA|IPR008506|Protein of unknown
function DUF788
         (176 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003080-1|AAH03080.1|  173|Homo sapiens HSPC171 protein protein.     119   5e-27
BC013412-1|AAH13412.1|  173|Homo sapiens HSPC171 protein protein.     118   1e-26
BC021109-1|AAH21109.1|  100|Homo sapiens HSPC171 protein protein.      63   4e-10

>BC003080-1|AAH03080.1|  173|Homo sapiens HSPC171 protein protein.
          Length = 173

 Score =  119 bits (287), Expect = 5e-27
 Identities = 52/133 (39%), Positives = 81/133 (60%)

Query: 16  QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 75
           QI  EN  T+KFY  + + A + Y ++T +F+Y + S W        L ++ A Y  M  
Sbjct: 14  QIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHSMSS 73

Query: 76  ISKPRYLNNTQLLDPGLDLNMEGGMGEHIKDIVILSSITQVLALINNYFWLLLLILPIRV 135
           +++  +  +  L+D G+DLNME GM EH+KD+++L++I QVL+  + Y W   L+ P R 
Sbjct: 74  MARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFWLLAPGRA 133

Query: 136 FWLLWTNILGPWF 148
            +LLW N+LGPWF
Sbjct: 134 LYLLWVNVLGPWF 146


>BC013412-1|AAH13412.1|  173|Homo sapiens HSPC171 protein protein.
          Length = 173

 Score =  118 bits (284), Expect = 1e-26
 Identities = 52/133 (39%), Positives = 80/133 (60%)

Query: 16  QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 75
           QI  EN  T+KFY  + + A + Y ++T +F+Y + S W        L ++ A Y  M  
Sbjct: 14  QIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHSMSS 73

Query: 76  ISKPRYLNNTQLLDPGLDLNMEGGMGEHIKDIVILSSITQVLALINNYFWLLLLILPIRV 135
           +++  +     L+D G+DLNME GM EH+KD+++L++I QVL+  + Y W   L+ P R 
Sbjct: 74  MARAAFSEYGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFWLLAPGRA 133

Query: 136 FWLLWTNILGPWF 148
            +LLW N+LGPWF
Sbjct: 134 LYLLWVNVLGPWF 146


>BC021109-1|AAH21109.1|  100|Homo sapiens HSPC171 protein protein.
          Length = 100

 Score = 63.3 bits (147), Expect = 4e-10
 Identities = 30/87 (34%), Positives = 48/87 (55%)

Query: 16  QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 75
           QI  EN  T+KFY  + + A + Y ++T +F+Y + S W        L ++ A Y  M  
Sbjct: 14  QIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHSMSS 73

Query: 76  ISKPRYLNNTQLLDPGLDLNMEGGMGE 102
           +++  +  +  L+D G+DLNME GM E
Sbjct: 74  MARAAFSEDGALMDGGMDLNMEQGMAE 100


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.331    0.144    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,768,301
Number of Sequences: 224733
Number of extensions: 948938
Number of successful extensions: 10872
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10869
Number of HSP's gapped (non-prelim): 3
length of query: 176
length of database: 73,234,838
effective HSP length: 85
effective length of query: 91
effective length of database: 54,132,533
effective search space: 4926060503
effective search space used: 4926060503
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 62 (29.1 bits)