GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000661-TA|BGIBMGA000661-PA|IPR013766|Thioredoxin domain,
IPR012336|Thioredoxin-like fold, IPR000886|Endoplasmic reticulum
targeting sequence, IPR006662|Thioredoxin-related,
IPR005788|Disulphide isomerase
         (632 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   2.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   2.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   4.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   4.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   4.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   4.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   8.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   8.4  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 11   ETKKQKTAVLSDISDIKDFKKILRTKTNVLVLFVNEMKK 49
            + KK+ +A L D+ D   F  ++     V+V+F+  +KK
Sbjct: 1209 DDKKKVSAELKDLRDKMVFTFLMLNSLYVIVIFLLTLKK 1247


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 11   ETKKQKTAVLSDISDIKDFKKILRTKTNVLVLFVNEMKK 49
            + KK+ +A L D+ D   F  ++     V+V+F+  +KK
Sbjct: 1209 DDKKKVSAELKDLRDKMVFTFLMLNSLYVIVIFLLTLKK 1247


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 252  PKQKKKDVVDESWARDTDV 270
            P+ K+ D+V+  W  D DV
Sbjct: 1202 PQNKRDDLVNPYWIEDPDV 1220


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 252  PKQKKKDVVDESWARDTDV 270
            P+ K+ D+V+  W  D DV
Sbjct: 1202 PQNKRDDLVNPYWIEDPDV 1220


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 252  PKQKKKDVVDESWARDTDV 270
            P+ K+ D+V+  W  D DV
Sbjct: 1202 PQNKRDDLVNPYWIEDPDV 1220


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 252  PKQKKKDVVDESWARDTDV 270
            P+ K+ D+V+  W  D DV
Sbjct: 1202 PQNKRDDLVNPYWIEDPDV 1220


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 10/22 (45%), Positives = 11/22 (50%)

Query: 334 LASRFGVKGYPTLKYFNKGEFK 355
           L+  FG  G   L Y NK  FK
Sbjct: 370 LSGTFGFFGTHILSYINKASFK 391


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 10/18 (55%), Positives = 10/18 (55%)

Query: 337 RFGVKGYPTLKYFNKGEF 354
           R   KG PTLK F   EF
Sbjct: 155 RIAAKGLPTLKLFALHEF 172


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,832
Number of Sequences: 317
Number of extensions: 6169
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 12
length of query: 632
length of database: 114,650
effective HSP length: 61
effective length of query: 571
effective length of database: 95,313
effective search space: 54423723
effective search space used: 54423723
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)