Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000660-TA|BGIBMGA000660-PA|IPR009984|Geminin
         (161 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   0.88 
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    25   1.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   2.7  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   4.7  
AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-l...    23   4.7  
EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.           23   6.2  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           23   6.2  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
          protein.
          Length = 455

 Score = 25.4 bits (53), Expect = 0.88
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 47 TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNE 96
          T+KKN S   Q+   +W+ E  L  E   +   +    +RR+  A+A NE
Sbjct: 48 TRKKNESLQEQLTQLRWLMEEKL-REQREDAQRREEEARRREEAAKADNE 96


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative
          cytoplasmic carbonic anhydrase protein.
          Length = 276

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)

Query: 41 SPRNIVTKKKNSSKSIQVNLDKW--ISENDLCLEVPSETYWKV 81
          SP +IVT K  +S  +Q N  +W  + EN   L  P    W+V
Sbjct: 29 SPVDIVTSKTQNSGDLQENPLRWTYVPENTRSLVNPGYC-WRV 70


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 84  EKRRKA-LAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKEL 131
           E RRK   A++  + E L + L +L   NLK K    +   F+ +C E+
Sbjct: 287 EARRKMNRAKSSEQREDLRR-LYILARSNLKRKIKASKRRCFLALCDEV 334


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 44  NIVTKKKNSSKSIQVNLDK-WISENDLCLEVPSETYWKVVAEKRR 87
           ++   +KN  +  QV LDK W+ E ++  E+ +E  + V   K R
Sbjct: 296 HVAESEKNREEHAQV-LDKIWLKEREIEQELEAERAFWVARRKVR 339


>AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-like
           3 protein protein.
          Length = 269

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 89  ALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKEL 131
           +LAE + E+   H +   +    LK+ +LL  A+  + V K+L
Sbjct: 46  SLAEMVKESYQTHGADGRMVVRMLKFVRLLPGADERVAVYKQL 88


>EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 11/38 (28%), Positives = 22/38 (57%)

Query: 85  KRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEAN 122
           +++ A   A+ + ++  +  + L EEN + KKL  EA+
Sbjct: 447 EQQSAQNNAIRDWDMYQQKETQLAEENARLKKLNGEAD 484


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 11/38 (28%), Positives = 22/38 (57%)

Query: 85  KRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEAN 122
           +++ A   A+ + ++  +  + L EEN + KKL  EA+
Sbjct: 447 EQQSAQNNAIRDWDMYQQKETQLAEENARLKKLNGEAD 484


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.307    0.126    0.342 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,951
Number of Sequences: 2123
Number of extensions: 5352
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 7
length of query: 161
length of database: 516,269
effective HSP length: 59
effective length of query: 102
effective length of database: 391,012
effective search space: 39883224
effective search space used: 39883224
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 45 (22.2 bits)