Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000660-TA|BGIBMGA000660-PA|IPR009984|Geminin
(161 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 32 0.048
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 31 0.11
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 29 0.25
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 28 0.77
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 27 1.0
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 27 1.4
SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase [UDP-... 27 1.4
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 1.4
SPBC651.10 |nse5||Smc5-6 complex non-SMC subunit Nse5|Schizosacc... 27 1.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 3.1
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 26 3.1
SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 3.1
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 26 3.1
SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8 |Schizos... 26 3.1
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 26 3.1
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 25 4.1
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 25 4.1
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 25 4.1
SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3 |Schizosacc... 25 4.1
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 25 5.5
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 25 5.5
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 25 5.5
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 25 7.2
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 25 7.2
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 25 7.2
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 25 7.2
SPBC19G7.02 |||4-amino-4-deoxychorismate lyase |Schizosaccharomy... 25 7.2
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.2
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 24 9.5
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 24 9.5
SPBC16G5.12c |top3||DNA topoisomerase III|Schizosaccharomyces po... 24 9.5
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 24 9.5
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 31.9 bits (69), Expect = 0.048
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 4/122 (3%)
Query: 2 SEHSGEESKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLD 61
S+HS E + + L S++K + R ++ R T ++S S + NLD
Sbjct: 306 SKHSSIEPNTSQEDSFQELPSLNKLSIQSRAFKKMRLPKISRTTDTPPASTSNSNKKNLD 365
Query: 62 KWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEA 121
K LC +++RK ++L +++ L K SL N K K LD
Sbjct: 366 KLKKMRKLCSRSLEPYELDSNTQRKRKRYEDSLKKSKTLDKVDSL----NRKMAKELDRK 421
Query: 122 NS 123
NS
Sbjct: 422 NS 423
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 30.7 bits (66), Expect = 0.11
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 88 KALAEALNENEILHKSLSLLTEENLK-YKKLLDEANSFIEVCKELMSDTADDT 139
K L EAL LS + E N K YK LLD+ N K L S+T T
Sbjct: 1038 KTLREALQSKTNNIDHLSTILERNRKEYKSLLDDYNQLRARYKNLQSNTPQST 1090
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 29.5 bits (63), Expect = 0.25
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 60 LDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLL 118
L KW + L PS+ ++ K +A+ + E EIL K +L+ E+NL +KLL
Sbjct: 2140 LSKWSTPTKLV--EPSQ--FRASPRKVDQAVVLSSEEKEILQKKYALIAEDNLIARKLL 2194
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 27.9 bits (59), Expect = 0.77
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 8 ESKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISEN 67
E+ + NTA+ + S+D ++ I +YFSP +T K S + V L+++ E
Sbjct: 940 ENTSSPNTASNPVWSIDNSVITELLPKQIWDYFSPNFYLTFWKLSLYDVFVPLERYEFER 999
Query: 68 DLCLEVPSET 77
+ +T
Sbjct: 1000 SRAFDQIRQT 1009
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 27.5 bits (58), Expect = 1.0
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 92 EALN-ENEILHKSLSLLTEENLKYKKLLDEANSFIEV 127
EALN +N+++ L L E+NL +K L AN+ + V
Sbjct: 504 EALNRKNDLIRGELDSLKEKNLVAQKQLKSANNTLHV 540
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 27.1 bits (57), Expect = 1.4
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 62 KWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLL 118
KW + L V Y + A + A+N IL KS + + E NLK + +L
Sbjct: 653 KWKKDGQPWLVVAEHNYGEGSAREHAALQPRAMNGRIILTKSFARIHETNLKKQGVL 709
>SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase
[UDP-forming]|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 27.1 bits (57), Expect = 1.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 119 DEANSFIEVCKELMSDTADDTGIEIDDTKICNGTIENGIEP 159
D A F+ C +++ + G+E + + GT GI+P
Sbjct: 220 DYARHFLSACSRILNLSTLPNGVEYNGQMVSVGTFPIGIDP 260
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 27.1 bits (57), Expect = 1.4
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 74 PSETYWKVVAEKRRKALAEAL-NENEILHKSLSLLTEENLKYKKLLDEAN 122
PS+ + + EK ++ AE L +ENE L S L + LK +KL+D N
Sbjct: 351 PSDNGVQDLQEKMQEVNAEKLQHENEKLESSHELGSIRTLKAQKLIDLDN 400
>SPBC651.10 |nse5||Smc5-6 complex non-SMC subunit
Nse5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 27.1 bits (57), Expect = 1.4
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 57 QVNLDKWISENDLC-LEVPSETYWKVVAEK 85
++N D W ENDL ++P E Y K+ + +
Sbjct: 76 KINFDAWSFENDLSDNDMPKENYLKIFSNQ 105
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.8 bits (54), Expect = 3.1
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 60 LDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLD 119
L ++ + L E S T ++ +R + + K+ L+T+ +L Y++L +
Sbjct: 2618 LQHFMDHSSLLAE-DSSTKMNLILLQRYAVIISIFLDQGKCEKANDLITKLSLPYEELAE 2676
Query: 120 EANSFIEVCKELM 132
S +E CK +
Sbjct: 2677 NFVSILEACKAFL 2689
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 3.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 95 NENEILHKSLSLLTEENLKYKKLL 118
NENEIL +S L EE + K LL
Sbjct: 509 NENEILSAQVSALREEIVSLKTLL 532
>SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 256
Score = 25.8 bits (54), Expect = 3.1
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 46 VTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLS 105
+TK KN D+ I DL +PS+ K+ E++ AL + + + I H S S
Sbjct: 153 MTKMKNEKVLEYPYKDRNIMLGDLASRIPSKDSEKLDEERQPIALEKTKSLDSISHSSSS 212
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 25.8 bits (54), Expect = 3.1
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 85 KRRKALAEALNENEILH--KSLSLLTEENLKYKKLLDEA 121
+RRKA + ++E L K L EE K+ K+L+EA
Sbjct: 145 ERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKILEEA 183
>SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 3.1
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 73 VPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEV--CKE 130
V S Y K + L EN ++ + S+ +EE+ K LLD A+S E+
Sbjct: 37 VRSYPYIKYSRSSLLLTASTTLPENFVISFTNSIESEESDKSDYLLDHAHSLQELSTTHS 96
Query: 131 LMSDTADDTGIEIDDTKICNGTIENGI 157
+S T E T+ T+ +GI
Sbjct: 97 SLSSTLTSMSEESSSTESKFATLNDGI 123
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 25.8 bits (54), Expect = 3.1
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 79 WKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADD 138
W V++ +LN+N ++K L T+E L K L+ + F+ + +E +D
Sbjct: 848 WDEVSDYTLLYQPYSLNKNPPINKIQPLTTDEMLYPKMLVGIDSEFVALQQEETEVRSDG 907
Query: 139 TGIEIDDTKI 148
T I +K+
Sbjct: 908 TKSTIKPSKL 917
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.4 bits (53), Expect = 4.1
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 81 VVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
++ + R+ AL + L ++ ++LSL+++ L+ LD +I E+MSD
Sbjct: 685 ILMQLRKAALHQLLFRSQYNLETLSLMSKRILREDAYLDANPQYIFEDMEVMSD 738
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 25.4 bits (53), Expect = 4.1
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 35 SIKEYFSPRNIVTKKKNSSKSIQV--NLDK 62
S+ ++F PR T ++S+ SI+ NLDK
Sbjct: 534 SLNDFFEPREASTPSESSNSSIESEDNLDK 563
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 25.4 bits (53), Expect = 4.1
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 9 SKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSS 53
S+I+ + +K +K +L R+K ++YFS N V K ++S+
Sbjct: 654 SQISVRAHHSWVKKQEKMMLEMREKNRQEKYFSVLNSVVKAESSN 698
>SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 878
Score = 25.4 bits (53), Expect = 4.1
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 56 IQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHK--SLSLLTEENLK 113
+QVNL + + L E PS+ + + + N+N + + +++ + E +K
Sbjct: 250 LQVNLCRIL----LACERPSDNPTRATLIRVLDRILSLPNDNSNVQQVNAVNAILFEAIK 305
Query: 114 YKKLLDEANSFIEVCKELMSDTADD 138
L+DE++S E C + ++D D
Sbjct: 306 LAFLVDESHSLYEKCMDRLADMIAD 330
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 25.0 bits (52), Expect = 5.5
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 41 SPRNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAE---ALNEN 97
+PR + K KS+ V +D ++ N L + + + + +K +++ E ++ +
Sbjct: 867 NPRTLEAKLLLYLKSLDVEIDALVASNPLNIRIMAAETVVYIIDKLNQSVLEGKTSVLKR 926
Query: 98 EILHKSL 104
EIL+ SL
Sbjct: 927 EILNSSL 933
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 25.0 bits (52), Expect = 5.5
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 8 ESKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKW 63
+ +I + TT D+ RK+ + +EY IV K NS S++ L KW
Sbjct: 256 DREIREDPTTTREDIEAMDIEKERKRENYEEYKQVDRIVAKHLNSDGSVEY-LVKW 310
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 25.0 bits (52), Expect = 5.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 86 RRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKEL 131
RRK L A NE + S + E L +KL D+ S+ ++ EL
Sbjct: 192 RRKDLEAATNE--FVEDYSSKFSSEELALRKLADDPESWRKLASEL 235
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 24.6 bits (51), Expect = 7.2
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 7 EESKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPR-NIVTKKKNSSKSIQVNLDKWIS 65
+++KIN + + S D SI S N V K SSK I+VN +
Sbjct: 266 DKAKINGSVHWVNISSSDDSTFYSVNLESITVTNSTSSNNVQSSKRSSKDIEVNTTVTLD 325
Query: 66 ENDLCLEVPSET 77
+ + +P +T
Sbjct: 326 TGTVYIYLPEDT 337
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 24.6 bits (51), Expect = 7.2
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 76 ETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMS 133
ETY V+ K+ K L E EN+ KS+ + E + + +D SF EV L++
Sbjct: 218 ETYAPVLKRKQAKKLLEK-QENQ---KSVEVKISEITESSQQIDPDKSFAEVVHILVT 271
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 24.6 bits (51), Expect = 7.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 12 NSNTATTILKSVDKDLLAG 30
NS T +LK VDKD L+G
Sbjct: 633 NSLEVTGLLKGVDKDYLSG 651
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 24.6 bits (51), Expect = 7.2
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 35 SIKEYFSPRNIVTKKKNSSKSIQVNLDKWISENDLCLEVPS-ETYWKVVAEKRRKALAEA 93
+++ + SP I+ S ++I +L + + + L V S WK A +R ++
Sbjct: 198 NVEVHVSPNAILNACWLSERNIHTDLYETHASSPNSLLVTSLAEIWKSEASRRNLTSSDE 257
Query: 94 LNENEILHKSLSLLTEEN 111
N LH+S L EE+
Sbjct: 258 TNSFSKLHQSQFGLKEES 275
>SPBC19G7.02 |||4-amino-4-deoxychorismate lyase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 231
Score = 24.6 bits (51), Expect = 7.2
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 94 LNENEILHKS-LSLLTEENLKYKKLLDEANSFIEVCKELM 132
L EN +H+ LL ++NLK + + NSF +VCK ++
Sbjct: 171 LLENGSIHEDDKGLLQKDNLKNGEQVLLFNSFRKVCKGVL 210
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 24.6 bits (51), Expect = 7.2
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 80 KVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDT 139
+++ E R+KA+ NE E L +S ++ + K + NS + E S+
Sbjct: 511 QIMLEARQKAIERRRNEEEELARSRERARKKAEEIKISSSKMNSSPTITNERSSNVESSK 570
Query: 140 GIEIDDTK 147
+E TK
Sbjct: 571 KVEAIYTK 578
>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 24.2 bits (50), Expect = 9.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 90 LAEALNENEILHK--SLSLLTEENLKYKKLLDEANSFIEVC 128
L + ++ EIL K SLS E K+L +A +F E+C
Sbjct: 350 LNKNIDVTEILEKDPSLSQFCENEGFIKRLAKKAKNFYEIC 390
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 24.2 bits (50), Expect = 9.5
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 27 LLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVN---LDKWISENDLCLEVPSETYWKVVA 83
++ G+ K + EYF N VT+KK+++ +N +++ + C P E +
Sbjct: 939 VVKGKSKDNF-EYFLSGNTVTRKKDNACFKMMNFEEIERRLWSGRYC--TPKEFLRDIKM 995
Query: 84 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCK 129
K+ L+ +N + HK+ + L +L+D A + C+
Sbjct: 996 IKQDAILSGDVN---LKHKAKEMFAHAELNVDELID-AKLLYDCCQ 1037
>SPBC16G5.12c |top3||DNA topoisomerase III|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 622
Score = 24.2 bits (50), Expect = 9.5
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 73 VPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK-LLDEANSFIEV 127
+PS+ +WKV R+ LA + + + + EE L KK LL +++EV
Sbjct: 396 LPSQDHWKVYELITRRFLACCSDNAKGAETLVQVKMEEELFSKKGLLVTEKNYLEV 451
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 24.2 bits (50), Expect = 9.5
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 1 MSEHSGEESKINSNTATTILKSVDKDLLAGRKKGSIKE 38
+ E E+ K++ +T ++ L+S+ +D+L +KK + E
Sbjct: 495 LREQIKEQKKVSESTQSS-LQSLQRDILNEKKKHEVYE 531
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.307 0.126 0.342
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,384
Number of Sequences: 5004
Number of extensions: 32144
Number of successful extensions: 132
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 115
Number of HSP's gapped (non-prelim): 34
length of query: 161
length of database: 2,362,478
effective HSP length: 68
effective length of query: 93
effective length of database: 2,022,206
effective search space: 188065158
effective search space used: 188065158
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 50 (24.2 bits)
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