Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000660-TA|BGIBMGA000660-PA|IPR009984|Geminin
(161 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1992| Best HMM Match : Geminin (HMM E-Value=0.0018) 38 0.003
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12) 31 0.34
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.34
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06) 31 0.34
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.34
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 31 0.45
SB_24520| Best HMM Match : CFEM (HMM E-Value=1.2) 31 0.60
SB_3866| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 30 0.79
SB_37315| Best HMM Match : DUF1565 (HMM E-Value=5.2) 30 1.0
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 29 1.4
SB_36683| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 1.8
SB_3931| Best HMM Match : GA (HMM E-Value=3.9) 29 1.8
SB_21717| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.64) 29 2.4
SB_20314| Best HMM Match : RVT_1 (HMM E-Value=1e-32) 29 2.4
SB_41133| Best HMM Match : LRR_1 (HMM E-Value=2.2e-09) 29 2.4
SB_22149| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_3395| Best HMM Match : RVT_1 (HMM E-Value=0.00037) 29 2.4
SB_54590| Best HMM Match : rve (HMM E-Value=4.8e-35) 28 3.2
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 28 3.2
SB_57243| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 28 4.2
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 28 4.2
SB_52324| Best HMM Match : Retrotrans_gag (HMM E-Value=0.97) 28 4.2
SB_43121| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 28 4.2
SB_40877| Best HMM Match : RVT_1 (HMM E-Value=2.9e-28) 28 4.2
SB_34233| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 28 4.2
SB_32124| Best HMM Match : K-box (HMM E-Value=4.1) 28 4.2
SB_24596| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43) 28 4.2
SB_18449| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 28 4.2
SB_697| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 28 4.2
SB_411| Best HMM Match : RVT_1 (HMM E-Value=2.5e-29) 28 4.2
SB_53357| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_53290| Best HMM Match : RVT_1 (HMM E-Value=3.8e-31) 28 4.2
SB_48461| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 28 4.2
SB_45719| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_45268| Best HMM Match : Retrotrans_gag (HMM E-Value=0.97) 28 4.2
SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_39667| Best HMM Match : rve (HMM E-Value=9e-32) 28 4.2
SB_28151| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 28 4.2
SB_27987| Best HMM Match : RVT_1 (HMM E-Value=4.8e-32) 28 4.2
SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_24280| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_23220| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 28 4.2
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 28 4.2
SB_4461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_3870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_3083| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 28 4.2
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 27 5.6
SB_24033| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_14304| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3) 27 5.6
SB_45928| Best HMM Match : Uso1_p115_C (HMM E-Value=0.54) 27 7.4
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_47207| Best HMM Match : NUDE_C (HMM E-Value=0) 27 7.4
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 27 9.8
SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_46304| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 27 9.8
SB_45153| Best HMM Match : rve (HMM E-Value=0) 27 9.8
SB_38701| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 27 9.8
>SB_1992| Best HMM Match : Geminin (HMM E-Value=0.0018)
Length = 155
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 49 KKNSSKSIQVNLDKWISENDLCL---EVPSETYWKVVAEKRRKALAEALNENE 98
K++SS+ + + K +S+ L E E+YW+++AE+RR AL E L EN+
Sbjct: 77 KRSSSEQVTDDDKKSVSDEAFALMIQEPAPESYWQLLAEERRLALQETLEENQ 129
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 33.1 bits (72), Expect = 0.11
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 82 VAEKRRKALAEALNEN-EILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTAD 137
V K R L E+L E+ +L +S L EENLK++++L+E + K+L S+ D
Sbjct: 1622 VESKDRPTLKESLVEDVSMLEHKVSSLEEENLKFRRVLEE---YANEVKQLHSEKED 1675
>SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12)
Length = 1020
Score = 31.5 bits (68), Expect = 0.34
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 6 GEESKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIV-TKKKNSSKSIQ-VNLDKW 63
G + I+ T++ +V +L++ +K F+ + T + N K+ + L K
Sbjct: 62 GFDLSISGQANNTVVNNVGPNLVS-----RLKIMFAGETLQDTNRYNVFKTYEEFYLSKV 116
Query: 64 ISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANS 123
E+ L + SE K+ ++ KA + A EN + K+ SLLT+ + Y + L EA
Sbjct: 117 EREDRLEQGIQSENMRKLRSKAGDKATSNA-KENALNAKNHSLLTDHGVLYPRALSEALL 175
Query: 124 FIEVCKELMSDTADDTGIEIDDTKI 148
F E+ T D + D TK+
Sbjct: 176 F-----EITLATVDQVVVGSDATKL 195
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 31.5 bits (68), Expect = 0.34
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 45 IVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAE-KRRKALAEALNENEILHKS 103
I ++ + + + L++W N ++ ET E RRK L L+E E++++
Sbjct: 1506 ITSRCEGREEDLHTALEQWQGYNS-AMQCFKETLAMGEVELTRRKTLV--LSEIEMINEQ 1562
Query: 104 LSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEIDD 145
++LL E + K LDE + ++ ++L + + ID+
Sbjct: 1563 INLLKEFKNEVKSRLDEYDCLFDIGEKLKRGASSEGEARIDE 1604
>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
Length = 825
Score = 31.5 bits (68), Expect = 0.34
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 84 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEI 143
E RK+L E +ENE L L EEN K + + + ++DT D T EI
Sbjct: 368 EALRKSLHEVEHENEELSDENRALDEENAKLTEEKRTLEDTVNKLRAQINDTLDTTLEEI 427
Query: 144 DDTKICNGTIEN 155
+ N +E+
Sbjct: 428 EHLHSFNEELES 439
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.5 bits (68), Expect = 0.34
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 84 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEI 143
E RK+L E +ENE L L EEN K + + + ++DT D T EI
Sbjct: 346 EALRKSLHEVEHENEELSDENRALDEENAKLTEEKRTLEDTVNKLRAQINDTLDTTLEEI 405
Query: 144 DDTKICNGTIEN 155
+ N +E+
Sbjct: 406 EHLHSFNEELES 417
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 31.1 bits (67), Expect = 0.45
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 47 TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSL 106
T + + S N+DK +SE D ++ ++ + + + NE + +H+
Sbjct: 192 TPRPSGSPKKSFNIDKLLSEKDAAIQSLTQQLQVSLKREEDLVIEGRQNEEKCMHEIALK 251
Query: 107 LTE-ENLKYKKLLDEANSFIEVCKELMSDTAD 137
+TE +NLK K+ +E +E + + + D
Sbjct: 252 ITEIQNLKIKE--EEGKQLVEERNKTVQELMD 281
>SB_24520| Best HMM Match : CFEM (HMM E-Value=1.2)
Length = 813
Score = 30.7 bits (66), Expect = 0.60
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 60 LDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLD 119
L K E+ L + SE K+ ++ KA + A EN + K+ SLLT+ + Y + L
Sbjct: 581 LSKVEREDRLEQGIQSENMRKLRSKAGDKATSNA-KENALNAKNHSLLTDHGVLYPRALS 639
Query: 120 EANSFIEVCKELMSDTADDTGIEIDDTKI 148
EA F E+ T D + D TK+
Sbjct: 640 EALLF-----EITLATVDQVVVGSDATKL 663
>SB_3866| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1178
Score = 30.7 bits (66), Expect = 0.60
Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 51 NSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEE 110
+SSK ++ NLDK + + L + + E K L+ + +E +K+L+L ++
Sbjct: 513 SSSKKLKQNLDKAVDDVITTLPNQDKCFTSTKPEASSKFLSPSEDEKNSFYKALNLCKKK 572
Query: 111 NLKYKKLLDEANSFIEVCKELMS--DTADDTGIEIDD---TKICNGT 152
+ + A+SFI + +++ D ++ + ++ KIC+ T
Sbjct: 573 PVVLSLVKPYADSFILKSRNILTIPDLFEEKNLTLEYHQLIKICSQT 619
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 30.3 bits (65), Expect = 0.79
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 88 KALAEALN-ENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEIDDT 146
K L + LN +NE + K +LTE + +L E +F E K ++ T +DT E+D
Sbjct: 209 KTLQDELNSKNEEIGKLRPMLTERDSMIAELRSELATFQE-NKNMLLSTLEDTRNELDGV 267
Query: 147 K 147
K
Sbjct: 268 K 268
>SB_37315| Best HMM Match : DUF1565 (HMM E-Value=5.2)
Length = 760
Score = 29.9 bits (64), Expect = 1.0
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 1 MSEHSGEESKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKK-NSSKSIQVN 59
+SE EE+++ NT + V++ LLAGR + +K + N +++K+ + +
Sbjct: 323 ISEKRYEENEVVENTISEKRYCVERVLLAGRNE-VLKGNEAVENTISEKRYGIERVLLAG 381
Query: 60 LDKWISENDLCLEVPSETYWKVVAEKRRKALA---EALNENEILHKSLS 105
++ EN+ SE + + R LA E L ENE++ ++S
Sbjct: 382 RNEVFEENEAVENTMSEKRYGI----ERVLLAGRNEVLGENEVVENTMS 426
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 29.5 bits (63), Expect = 1.4
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 35 SIKEYFSPRNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEAL 94
S+KE + I K++ +K K E + L V Y ++V+E+ + E +
Sbjct: 1208 SLKEELEEQ-IAKKREQLAKEAGAKRQKLKEEYEGKLRV---IYEELVSERSKNK--ELM 1261
Query: 95 NENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEIDDTKICNGTIE 154
N+N L + + LL K KK ++ E KEL + E D+ K+ + E
Sbjct: 1262 NQNNQLSQKVKLLEGVTTKQKKDIERVKQMEEKLKELERQSKQSE--ETDNPKVIE-SYE 1318
Query: 155 NGIEPIE 161
+ I+ +E
Sbjct: 1319 DKIKALE 1325
>SB_36683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 80 KVVAEKRRKALAEALNENEILHKSLSLLTEE 110
+VVAEKR L L N +LH+ S EE
Sbjct: 355 RVVAEKRLSYLKHRLERNPVLHQKYSKTVEE 385
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 80 KVVAEKRRKALAEALNENEILHKSLSLLTEE 110
+VVAEKR L L N +LH+ S EE
Sbjct: 1118 RVVAEKRLSYLKHRLERNPVLHQKYSKTVEE 1148
>SB_3931| Best HMM Match : GA (HMM E-Value=3.9)
Length = 288
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/99 (17%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 11 INSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISENDLC 70
+ +T+ K+ + L + ++ + + N + ++KN+S + + ++ +S+ +
Sbjct: 69 VRKKNNSTVTKASNNRLEREKNNSTVTK--ASNNHLVREKNNSAVTKASNNRLVSKGEED 126
Query: 71 LEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTE 109
V ++ +V EK + +A N + + K+ S +T+
Sbjct: 127 STVTKASHNSLVREKNNSTVTKAFNNHLVREKNNSTVTK 165
>SB_21717| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.64)
Length = 499
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 81 VVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDE 120
VV+E++ + + + +NE + K+ + +E LKY+KL++E
Sbjct: 459 VVSEEQARNIKQFINEAKEGRKTHKDIEQEALKYEKLMEE 498
>SB_20314| Best HMM Match : RVT_1 (HMM E-Value=1e-32)
Length = 1556
Score = 28.7 bits (61), Expect = 2.4
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD--TADDT-GIEI 143
R L +N I + LL+EENL +KK D A+S +E + M+D +A T +E+
Sbjct: 492 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMADLQSAPSTLNVEL 547
Query: 144 DDTKI 148
+ K+
Sbjct: 548 NGLKV 552
>SB_41133| Best HMM Match : LRR_1 (HMM E-Value=2.2e-09)
Length = 539
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 82 VAEKRRKALAEALNENEILHK---SLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADD 138
V K KAL+E + N+ LH SL+ L ++N + + NS ++ K +D ++
Sbjct: 219 VGAKTMKALSEVMEVNKTLHSLDLSLNSLNDKNTTPFFIALKGNSSLKELKMSYNDISEV 278
Query: 139 TGIEIDDTKICNGTIE 154
G + + N +E
Sbjct: 279 AGFRLGGSLAVNKGLE 294
>SB_22149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 113 KYKKLLDEANSFIEVCKELMSDTADDTGIEIDDTKICNGTIENGIEPI 160
K+ KLL S I C+ L DD+ ++ D ++C +ENGI+ +
Sbjct: 2 KFTKLLKPVYSKILQCRYLSVAYIDDSILQTDSYELC---VENGIDTL 46
>SB_3395| Best HMM Match : RVT_1 (HMM E-Value=0.00037)
Length = 782
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 113 KYKKLLDEANSFIEVCKELMSDTADDTGIEIDDTKICNGTIENGIEPI 160
K+ KLL S I C+ L DD+ ++ D ++C +ENGI+ +
Sbjct: 537 KFTKLLKPVYSKILQCRYLSVAYIDDSILQTDSYELC---VENGIDTL 581
>SB_54590| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1309
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDCLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 84 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
EK+ L + E+E +H+S S L K K+ L E+ ++ C + D
Sbjct: 1204 EKKDNRLEQLTMESEEMHRSASSLKAIVDKIKERLAESEDRVDACSSYIED 1254
>SB_57243| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 341
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 16 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 59
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 308 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 351
>SB_52324| Best HMM Match : Retrotrans_gag (HMM E-Value=0.97)
Length = 193
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_43121| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 1037
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_40877| Best HMM Match : RVT_1 (HMM E-Value=2.9e-28)
Length = 734
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_34233| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 216
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 16 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 59
>SB_32124| Best HMM Match : K-box (HMM E-Value=4.1)
Length = 207
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 73 VPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELM 132
+PS +K RK LA+ +++NEIL K + L + + L++ IE KE+
Sbjct: 29 IPSNDRLDNENQKLRKELADRVDQNEILLKQVKELEKVRDEQMDDLEDQYKEIEHLKEI- 87
Query: 133 SDTADDTGIEI 143
++ ++ +E+
Sbjct: 88 NEELNNRNVEL 98
>SB_24596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 82 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 125
>SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43)
Length = 1602
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 585 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 628
>SB_18449| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 624
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_697| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 603
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 16 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 59
>SB_411| Best HMM Match : RVT_1 (HMM E-Value=2.5e-29)
Length = 730
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 16 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 59
>SB_53357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_53290| Best HMM Match : RVT_1 (HMM E-Value=3.8e-31)
Length = 1090
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_48461| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 327
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 16 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 59
>SB_45719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 27.9 bits (59), Expect = 4.2
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 46 VTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLS 105
V + + S+ +Q +++ E+ ++TY VA K+ K L+E L+E ++L +
Sbjct: 116 VDRARTDSRDLQKQIEQQ-RESMAMNRGGADTYKSAVA-KKNKELSEYLDELKMLQE--- 170
Query: 106 LLTEENLKYKKLLDEANSFIEVCKELMSDTADD 138
T E L+ K LDE+ +E M AD+
Sbjct: 171 --TNEELEMK--LDESKRELEAATTEMDKIADE 199
>SB_45268| Best HMM Match : Retrotrans_gag (HMM E-Value=0.97)
Length = 193
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 27.9 bits (59), Expect = 4.2
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 60 LDKWISEN-DLCLEVPSETYWKVVAEKR--RKALAEALNENEILHKSLSLLTEENLKYKK 116
L +W+ ++ DL EV +ET +V K+ ++ + NE++HK L+E +LK +K
Sbjct: 183 LKEWVDKDLDLSKEV-NETKKEVQETKKEVQETKIKVDETNEVVHKMDGKLSEMSLKAEK 241
Query: 117 L-LDEANSFIEVCKELMSDTADDTGIEIDD 145
+ +D A+ E + ++ D T + D+
Sbjct: 242 MAVDLASLKEEFSSKKVNSKKDITAAKGDE 271
>SB_39667| Best HMM Match : rve (HMM E-Value=9e-32)
Length = 1845
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 118 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 161
>SB_28151| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 410
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 16 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 59
>SB_27987| Best HMM Match : RVT_1 (HMM E-Value=4.8e-32)
Length = 779
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 117 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 160
>SB_24280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1351
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_23220| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 1597
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 73 VPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELM 132
+PS +K RK LA+ +++NEIL K + L + + L++ IE KE+
Sbjct: 766 IPSNDRLDNENQKLRKELADRVDQNEILLKQVKELEKVRDEQMDDLEDQYKEIEHLKEI- 824
Query: 133 SDTADDTGIEI 143
++ ++ +E+
Sbjct: 825 NEELNNRNVEL 835
>SB_4461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
>SB_3870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 199 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 242
>SB_3083| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 295
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R L +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 75 RDRLVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 118
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 92 EALNENEILHKSLSLLTEENLKYKKLLDEANSFIEV-CKELMSD 134
E EN+ L K + L EEN+ K L E N E+ EL +D
Sbjct: 1861 EYTKENDTLQKEIIELREENISQKSKLYEINDRYELQIAELKND 1904
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADD 138
RK EA N+ + + E +K L+EAN + C++ + T ++
Sbjct: 801 RKDWIEASNQRSLFETRAETVEAERKSLQKQLEEANRKLRACQDEILQTDEN 852
>SB_24033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 134 DTADDTGIEIDDTKICNGTIENGIE 158
DT DDT + +D C+G IE+G +
Sbjct: 158 DTEDDTDGDTEDDTECDGDIEDGTD 182
>SB_14304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1219
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 7 EESKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWI-S 65
++ +++ N A I K + K +L +KG NI+ +KN +++
Sbjct: 160 KKKQLHENEARKIFKKIVKGVLHCHRKGIAHRDLKLENILLSRKNEPIISDFGFARYVGG 219
Query: 66 ENDLCLEVP-SETY 78
+D C+ P S T+
Sbjct: 220 SSDTCMTRPRSNTF 233
>SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 27.5 bits (58), Expect = 5.6
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 24 DKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVA 83
+KD L G K ++ EY + N +T+K+N+ + DK L+ E K V
Sbjct: 191 EKDELEGSKDEAV-EYINMENGITRKRNTLFQRYIECDK--LRKLASLKDAPEKNQKQVE 247
Query: 84 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEV 127
E +K + L E E K L ++ + K +D A S +E+
Sbjct: 248 ELEKK--IQQLEEKE---KQLMEKNKDVNETKSKMDVAKSELEI 286
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 27.5 bits (58), Expect = 5.6
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 84 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEI 143
EK AL A E + +L+ E L+Y++L+ E +E + +SDT + T ++
Sbjct: 1509 EKENSALGAARRGRETIRANLA---ETRLRYERLMAEVQGVMERLLDWVSDT-EKTLVQQ 1564
Query: 144 DDTKICNGTIENGIE 158
D + +E IE
Sbjct: 1565 DASPADVRQLEEQIE 1579
>SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3)
Length = 471
Score = 27.5 bits (58), Expect = 5.6
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 31 RKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKAL 90
+K+G + + + K SS +V++ + EN E + K +K+ K
Sbjct: 214 KKRGHDDDGDKEAVVSEEPKRSSSEQEVDIKQNFDENTTKQESGCKPKNKKRKKKKEKKT 273
Query: 91 AEALNENEILHKSL-SLLTEENL-------KYKKLLDEANSFIEVCKELMSDT 135
E NE+ I KS EE+L K KK D + +I+ K+++++T
Sbjct: 274 NETDNESSIKKKSCEDSEDEEHLPSKEKKKKRKKSKDSSEGYIKQSKDIIAET 326
>SB_45928| Best HMM Match : Uso1_p115_C (HMM E-Value=0.54)
Length = 500
Score = 27.1 bits (57), Expect = 7.4
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Query: 8 ESKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISEN 67
E+K+ N LK++ KD+ GR +G + + P + K +K N SEN
Sbjct: 324 EAKVKMNNIVERLKNMIKDIDTGR-QGKMGDPLDPLGMENIKVRVTKIKGENGQPVWSEN 382
Query: 68 DL-CLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIE 126
D E E+ ++ ++ + + E L + + + E + Y + L+ +
Sbjct: 383 DEDADETAIESRLRMATKRMERIVKEQLRDAGVAPAEKLVNDEFRVMYVRALNATS---- 438
Query: 127 VCKELMSDTADDTGIEIDDTK 147
V L+S+T +++ K
Sbjct: 439 VATSLLSNTNGGNQDAVEERK 459
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 27.1 bits (57), Expect = 7.4
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 35 SIKEYFSPRNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEAL 94
++ + F P N+ + NSSK Q+ +KW+ + L+ P+ ++++K +A
Sbjct: 1548 ALPQQFQP-NLRPSRTNSSKYNQIQSNKWLQRTKV-LKYPT----SFTEKEKQKVMAVMR 1601
Query: 95 NENEILHKSLS 105
N L KS+S
Sbjct: 1602 NLYMSLDKSMS 1612
>SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 27.1 bits (57), Expect = 7.4
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 5 SGEESKI-NSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKW 63
S E KI + LK K+++A K+G +E I T K + ++ +
Sbjct: 60 SSFEKKIAEQEEEISALKRSLKEMVARPKRGESEEASLLSEIATMKSELASCREIVREAQ 119
Query: 64 ISENDLCLEVPSETYWKVVAEKRRK 88
+EN+L ++ TY ++A+K R+
Sbjct: 120 STENELLSKM--NTYRSMLADKERE 142
>SB_47207| Best HMM Match : NUDE_C (HMM E-Value=0)
Length = 294
Score = 27.1 bits (57), Expect = 7.4
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
Query: 65 SENDLCLEVPSE--TYWKVVAEK---RRKALAEALNENEILHKSLS-------LLTEENL 112
S+ DL P E YWK +AE+ + + L + NE + +L + EE
Sbjct: 5 SDKDLEFADPKEEAAYWKRLAEEYEQKYEKLESSQNEAYLTVTALQDETAQLKAVREELQ 64
Query: 113 KYKKLLDEANSFIEVCKELMSDTADDTGIEIDDTKICNGTIENGIEPIE 161
KY + L++AN +E K + +D ++ N +EN ++ E
Sbjct: 65 KYVRELEQANDDLERAKRATVCSLEDFEHRLNQAIERNAILENELDEKE 113
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 24 DKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISEND 68
D +L+ SIK +N V++++N + S QVN DK + +D
Sbjct: 1453 DSKVLSTSGDHSIKNSDPDKNEVSREENVALSKQVNADKQVIADD 1497
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 26.6 bits (56), Expect = 9.8
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 37 KEYFSPRNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNE 96
KE F + +T KN + L +E DL + E KV + + L +A NE
Sbjct: 258 KEVFLLKKQLTDVKNQLAKSESQLQA--AEKDLAFKT-QELKEKV---QDSEELIKASNE 311
Query: 97 NEILHKSLSLLTEENLKYKKLLDEANSFIE----VCKEL 131
N K + L+EE +K K LLD+ + +E CK+L
Sbjct: 312 NI---KKAANLSEELMKTKSLLDQVKAQLESSEAKCKQL 347
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 26.6 bits (56), Expect = 9.8
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 11/140 (7%)
Query: 4 HSGEESKINSNTATTILKSVDKDLLA----GR---KKGSIKEYFSPRNIVTKKKNSSKSI 56
+ G KI+S T +++D LA GR K+GS+ F + ++ +
Sbjct: 62 NEGPSFKISSGTRVCSRHFIEEDYLAPDNAGRRMLKRGSVPSIFDWSSQPKSRRKIVRHT 121
Query: 57 QVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 116
+ SE+D L S+ + + + AE L E+L KS S K +
Sbjct: 122 DSDTQTVESESDSELMSSSDLMQQEITSLK----AELLATEELLMKSQSETVAAKEKILE 177
Query: 117 LLDEANSFIEVCKELMSDTA 136
+ +EA E EL TA
Sbjct: 178 VEEEAKRIKEEDDELYKGTA 197
>SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 731
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 84 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSF-IEVCKELMSDTADDTGIE 142
EKR + + NE+++K+ + + +Y+ + E N I++ + +
Sbjct: 415 EKREQLRLDIAKLNELINKAEENMVQLRKRYETSVQERNDMGIQLIERNEEVCVFYEKLN 474
Query: 143 IDDTKICNGTIE 154
I DT I NG +E
Sbjct: 475 IQDTMIRNGDVE 486
>SB_46304| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 645
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 136 ADDTGIEIDDTKICNGTIENG 156
+ D ++IDD +I NGT +NG
Sbjct: 560 SQDGALQIDDDEIVNGTSKNG 580
>SB_45153| Best HMM Match : rve (HMM E-Value=0)
Length = 2264
Score = 26.6 bits (56), Expect = 9.8
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 85 KRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
K R L NE + + L L+EENL +KK D A+S +E + M+D
Sbjct: 1050 KTRLDLXXXXINNERIQRRL--LSEENLLFKKAYDIASS-METTAQHMAD 1096
>SB_38701| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 314
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 87 RKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSD 134
R + +N I + LL+EENL +KK D A+S +E + M+D
Sbjct: 133 RDRVVSGINNERIQRR---LLSEENLTFKKAYDIASS-METTAQHMAD 176
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.307 0.126 0.342
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,328,402
Number of Sequences: 59808
Number of extensions: 204981
Number of successful extensions: 679
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 650
Number of HSP's gapped (non-prelim): 81
length of query: 161
length of database: 16,821,457
effective HSP length: 77
effective length of query: 84
effective length of database: 12,216,241
effective search space: 1026164244
effective search space used: 1026164244
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 56 (26.6 bits)
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