Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000660-TA|BGIBMGA000660-PA|IPR009984|Geminin
(161 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006634-2|AAF39794.2| 179|Caenorhabditis elegans Hypothetical ... 36 0.014
Z81589-1|CAB04717.1| 272|Caenorhabditis elegans Hypothetical pr... 32 0.23
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 32 0.23
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 30 0.69
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 30 0.69
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 30 0.69
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 30 0.69
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 30 0.69
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical p... 29 1.6
Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z79596-7|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 1.6
AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E... 29 1.6
Z68299-7|CAJ90495.1| 269|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z68299-6|CAA92610.2| 412|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 29 2.1
Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF039048-10|AAB94240.2| 421|Caenorhabditis elegans Hypothetical... 28 3.7
U53342-6|AAA96218.1| 466|Caenorhabditis elegans Hypothetical pr... 27 4.8
AL033508-1|CAA22058.2| 821|Caenorhabditis elegans Hypothetical ... 27 4.8
Z81586-6|CAB04696.1| 484|Caenorhabditis elegans Hypothetical pr... 27 6.4
U80445-6|AAB37797.2| 575|Caenorhabditis elegans Hypothetical pr... 27 6.4
AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical ... 27 6.4
Z78239-4|CAI79142.1| 306|Caenorhabditis elegans Hypothetical pr... 27 8.5
U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical pr... 27 8.5
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 27 8.5
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 27 8.5
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 27 8.5
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 27 8.5
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 27 8.5
>AC006634-2|AAF39794.2| 179|Caenorhabditis elegans Hypothetical
protein F35F11.2 protein.
Length = 179
Score = 35.9 bits (79), Expect = 0.014
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 86 RRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEIDD 145
+ + + + L + + L K+L L E K K +LDE+ + + ++++ D + +
Sbjct: 23 KNETIKKFLIDRKQLEKALRLAAENEKKLKSMLDESGKWFDRYEKMIDDLDEQLTTYNTN 82
Query: 146 TKICNGTIENGIEPI 160
KI I NGI+P+
Sbjct: 83 RKIVLDNIINGIQPM 97
>Z81589-1|CAB04717.1| 272|Caenorhabditis elegans Hypothetical
protein T08G5.1 protein.
Length = 272
Score = 31.9 bits (69), Expect = 0.23
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 14 NTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLD 61
NT+T+ ++D+ R SIK + PRNI + ++ S+ I+V+ D
Sbjct: 136 NTSTSRNTQNNEDVTVLRNFNSIKHHQKPRNIAYRPRHHSRKIRVHQD 183
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 31.9 bits (69), Expect = 0.23
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 3 EHSGEESKINSNTATTILKSVDKDLLAGRKK--GSIKEYFSPRNIVTKKKNSSKSIQVNL 60
E G + NS ++ V+K+ +A RK+ G K+ F P KK ++ ++
Sbjct: 39 EEDGNSERSNSKVCIEEVEEVEKEEIASRKRKRGKTKDEFHPCPFCEKKFRYPNKLREHI 98
Query: 61 DKWISENDLCLEVPSETYWKVVAEKR 86
S CLE + T + E R
Sbjct: 99 KIHDSNRYQCLECSTITKFGTYGELR 124
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 31.1 bits (67), Expect = 0.39
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 3 EHSGEESKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDK 62
E + E +I N + LKSV K+L + E + KK++ + +Q N +K
Sbjct: 50 EFNDEMKQIQQNVMSE-LKSVKKELKQATSIKDLLEILEIIQKIFKKQDEFQQVQENQNK 108
Query: 63 WISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDE 120
I + L+ ++ K+++ E L +N K+L L+ E LK++K D+
Sbjct: 109 SIENLNSELKTVKA---ELNETKKQQESQEKLIDNS--DKNLKLILESILKFQKSQDQ 161
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical
protein ZK637.8e protein.
Length = 888
Score = 30.3 bits (65), Expect = 0.69
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 84 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGI-E 142
EK L E E L K+ S LTE K +L + +F E +++++ +A+ +GI E
Sbjct: 114 EKLENELREVNKNEETLKKNFSELTE----LKHILRKTQTFFEEHEDMIASSAESSGIGE 169
Query: 143 I--DDTKICNGTIENGIEPIE 161
+ D + +G + + P++
Sbjct: 170 VLSADEEELSGRFSDAMSPLK 190
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical
protein ZK637.8c protein.
Length = 894
Score = 30.3 bits (65), Expect = 0.69
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 84 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGI-E 142
EK L E E L K+ S LTE K +L + +F E +++++ +A+ +GI E
Sbjct: 114 EKLENELREVNKNEETLKKNFSELTE----LKHILRKTQTFFEEHEDMIASSAESSGIGE 169
Query: 143 I--DDTKICNGTIENGIEPIE 161
+ D + +G + + P++
Sbjct: 170 VLSADEEELSGRFSDAMSPLK 190
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 30.3 bits (65), Expect = 0.69
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Query: 37 KEYFSPRNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNE 96
KE + +T+ KN Q + + W SE L S T+ E R +A+ +NE
Sbjct: 430 KEAAGAKVTITEDKNKENEKQADKETWTSEEIQLLVKASNTFPPGTVE-RWVQIADYINE 488
Query: 97 NEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEIDDTKICNGTIENG 156
+ L TE K+++ + + + +L S T + G + D + + T +
Sbjct: 489 HRKDSTGLPPKTE-----KQVIKQCKAVQTMNVKLPSTTQNQLGTALPDEDVWSATEQKT 543
Query: 157 IE 158
+E
Sbjct: 544 LE 545
Score = 27.1 bits (57), Expect = 6.4
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 31 RKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKAL 90
RK I PR I KK+ +K + DK + + + E K AE ++K
Sbjct: 277 RKLVDIAYAKDPRIIKFKKEQQAKKDKAKEDKQRAIREKQEAIDREKREKEEAEAKQKEE 336
Query: 91 AE--ALNENEILHKSLSL----LTEENLKYKKLLDEANSFIEVCKELMSD 134
A+ A E E K + ++++ + KKL DEA + E ++ +++
Sbjct: 337 ADRKAKEEREREKKERDIAKKAMSQQRKRLKKLADEAGHWTENPRDKLTE 386
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 30.3 bits (65), Expect = 0.69
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 84 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGI-E 142
EK L E E L K+ S LTE K +L + +F E +++++ +A+ +GI E
Sbjct: 114 EKLENELREVNKNEETLKKNFSELTE----LKHILRKTQTFFEEHEDMIASSAESSGIGE 169
Query: 143 I--DDTKICNGTIENGIEPIE 161
+ D + +G + + P++
Sbjct: 170 VLSADEEELSGRFSDAMSPLK 190
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 30.3 bits (65), Expect = 0.69
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 84 EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGI-E 142
EK L E E L K+ S LTE K +L + +F E +++++ +A+ +GI E
Sbjct: 114 EKLENELREVNKNEETLKKNFSELTE----LKHILRKTQTFFEEHEDMIASSAESSGIGE 169
Query: 143 I--DDTKICNGTIENGIEPIE 161
+ D + +G + + P++
Sbjct: 170 VLSADEEELSGRFSDAMSPLK 190
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 29.5 bits (63), Expect = 1.2
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 46 VTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEK---RRKALAEALNENEILHK 102
+ KK + +S + +L K++++ + E Y++ ++ +RK LAEA ++ K
Sbjct: 77 IQKKIDFQQSTRDHLVKYLTKEKE-KKRQMEVYFRTKGQEFDSQRKKLAEATAWIQMAEK 135
Query: 103 SLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGI 141
L EE +K ++ ++E + ++ LMS AD G+
Sbjct: 136 KLQASEEERVKAEREIEECQAKLKSMTNLMS--ADTLGM 172
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 29.5 bits (63), Expect = 1.2
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 49 KKNSSKSIQVNLDKWISENDLCLEV--PSETYWKVVAEKRRKALAEALNENEILHKSLSL 106
K + S ++ L + S+ +L +E ET W+V + L E E + + + L
Sbjct: 216 KMDPSSTMNEELTELRSQMNLIIEYNEKQETVWQVKLSEASAQLNEKDLVIEKITRKIEL 275
Query: 107 LTEENLKYKKLLDEANSFIE---VCKELMSDTAD 137
L E N+K + + E E CK L DT +
Sbjct: 276 LQENNVKKDQRIYELEQCFESEDYCKILQKDTKE 309
>Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical
protein C26H9A.2 protein.
Length = 1334
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 94 LNENEILHKSLSLLTEENLKYKKLL-DEANSFIEVCKELMSDTADDTGIEIDDTKICNGT 152
L EN IL + L E L Y+ L ++ SF+ + L + DD + DD+KI
Sbjct: 899 LTENHILLQPFYYLLER-LSYQSLTPNQLRSFLRLDSPLCCRSLDDDEDDDDDSKIEIAD 957
Query: 153 IENGIEPIE 161
E G P++
Sbjct: 958 NEGGPVPLQ 966
>Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical
protein Y49E10.11b protein.
Length = 1089
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 55 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 114
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 622 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 680
Query: 115 KKLLDEANSFIEVCKEL 131
++ + F+ EL
Sbjct: 681 EETYQKLEQFVARAIEL 697
>Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical
protein Y49E10.11a protein.
Length = 1139
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 55 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 114
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 622 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 680
Query: 115 KKLLDEANSFIEVCKEL 131
++ + F+ EL
Sbjct: 681 EETYQKLEQFVARAIEL 697
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 37 KEYFSPRN--IVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEAL 94
+E PR +VTKKK S ++ D++ E+D + SE + + E +
Sbjct: 370 RESLKPRKSLLVTKKKTKSMVERILDDEFDDEDDDDEDDDSEVNKNDREDDDEDDVDERI 429
Query: 95 NENEIL--HKSLSLLTEENLKYKKLLDEANSFIE 126
++ + +K ++ T+E + ++ +LD A++ +E
Sbjct: 430 SDRDSSSSYKRHAITTKEEIGFRDILDRADNLVE 463
>Z79596-7|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 37 KEYFSPRN--IVTKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEAL 94
+E PR +VTKKK S ++ D++ E+D + SE + + E +
Sbjct: 370 RESLKPRKSLLVTKKKTKSMVERILDDEFDDEDDDDEDDDSEVNKNDREDDDEDDVDERI 429
Query: 95 NENEIL--HKSLSLLTEENLKYKKLLDEANSFIE 126
++ + +K ++ T+E + ++ +LD A++ +E
Sbjct: 430 SDRDSSSSYKRHAITTKEEIGFRDILDRADNLVE 463
>AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E2
ATPase protein.
Length = 815
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 55 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 114
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 298 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 356
Query: 115 KKLLDEANSFIEVCKEL 131
++ + F+ EL
Sbjct: 357 EETYQKLEQFVARAIEL 373
>Z68299-7|CAJ90495.1| 269|Caenorhabditis elegans Hypothetical
protein T04B2.3b protein.
Length = 269
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 64 ISENDLCLEVPSETYWKVVA-EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEAN 122
+ NDL P T ++ + A+A+NEN +LH+S T E+L A
Sbjct: 33 VEHNDLSGSCPDLTAQQIQKWDDYLYETAKAVNENGVLHESTGERTSEDLSSSVYEVAAP 92
Query: 123 SFIEVCKELMSDTAD 137
+E + +S T++
Sbjct: 93 GIMETLTQTISGTSN 107
>Z68299-6|CAA92610.2| 412|Caenorhabditis elegans Hypothetical
protein T04B2.3a protein.
Length = 412
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 64 ISENDLCLEVPSETYWKVVA-EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEAN 122
+ NDL P T ++ + A+A+NEN +LH+S T E+L A
Sbjct: 176 VEHNDLSGSCPDLTAQQIQKWDDYLYETAKAVNENGVLHESTGERTSEDLSSSVYEVAAP 235
Query: 123 SFIEVCKELMSDTAD 137
+E + +S T++
Sbjct: 236 GIMETLTQTISGTSN 250
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 88 KALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEIDDTK 147
K LAE E+++L + LL +EN++ K ++ +E S +A +T E ++ K
Sbjct: 32 KMLAEEKEEHQLLKDEVVLLRKENVEAKTYSTLLEIMLDEAEEKAS-SAQETTSEENNLK 90
Query: 148 ICN 150
I N
Sbjct: 91 ILN 93
>Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical
protein C53D6.6 protein.
Length = 615
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 57 QVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 116
+ L++WISE ++ E P +W+ + R L L+ + +L +LL ENL K
Sbjct: 527 KTELERWISEPNIAFEEPI-VFWQKAENRTRYPLLFQLS-SIVLCLPGALLNTENLTSAK 584
Query: 117 LL 118
L
Sbjct: 585 NL 586
>AF039048-10|AAB94240.2| 421|Caenorhabditis elegans Hypothetical
protein F16B4.9 protein.
Length = 421
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 9 SKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISEND 68
S + + T T + VD LLAG+ + + + P + KK N+ + ++++L +W S+
Sbjct: 132 SSMLTPTITKPKRIVDVTLLAGKIQKILNDKKIPEHPRLKKLNNLERLELSLREWRSKQK 191
Query: 69 L 69
+
Sbjct: 192 I 192
>U53342-6|AAA96218.1| 466|Caenorhabditis elegans Hypothetical
protein F01G12.6 protein.
Length = 466
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 92 EALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEIDDTKI 148
EA N I H+ L+ L + N + L+ A I D DTG ++DDT +
Sbjct: 54 EAENYINIAHE-LNKLRDMNSDVHRKLEGAYETIRELSSARRDNIMDTGTQVDDTSM 109
>AL033508-1|CAA22058.2| 821|Caenorhabditis elegans Hypothetical
protein Y106G6G.2 protein.
Length = 821
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 12 NSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISENDLCL 71
N + T L++V D GR KG + + + I T++ + + N+ +W++ + +
Sbjct: 611 NVSQITPTLRNVINDF-DGRAKGLLSDVEKLKRIKTRQDEVECTEEKNVARWMTSSAWQM 669
Query: 72 EVPSETYWKVVAEKR--RKALAEALN 95
+ + + V EKR R+ + EA++
Sbjct: 670 IIDVLSTFLAVKEKRKTREKIREAIS 695
>Z81586-6|CAB04696.1| 484|Caenorhabditis elegans Hypothetical
protein T05F1.7 protein.
Length = 484
Score = 27.1 bits (57), Expect = 6.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 74 PSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDE 120
P E WK + E +K + + E+E LH + S L EE +K DE
Sbjct: 292 PKEN-WKQL-EDLKKQIIQLKRESEALHMNKSRLFEEKEALQKTADE 336
>U80445-6|AAB37797.2| 575|Caenorhabditis elegans Hypothetical
protein C50F2.1 protein.
Length = 575
Score = 27.1 bits (57), Expect = 6.4
Identities = 10/37 (27%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 103 SLSLLTEENLKYKKLLDEANSFIEVC-KELMSDTADD 138
++ L+ EEN Y K + E+ ++++C + ++S+ D
Sbjct: 527 TIKLVVEENKTYVKKIKESELYVDICNRNVLSEAVMD 563
>AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical
protein M151.1 protein.
Length = 402
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 71 LEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLL 107
LE YW+ ++ RKA +E L + L KSL L
Sbjct: 330 LEKTRGMYWEDLSRNERKAWSEKLTQLRKLQKSLEAL 366
>Z78239-4|CAI79142.1| 306|Caenorhabditis elegans Hypothetical
protein C30G7.4 protein.
Length = 306
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 28 LAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISE 66
L KK +FSP N+ ++ N+ K Q+N+ IS+
Sbjct: 103 LKSTKKKLKPMFFSPNNLFHRENNNEKVSQLNIISHISK 141
>U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical
protein ZC155.3 protein.
Length = 845
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 88 KALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKE 130
+ L + ++EN I K + ++ Y K+LDE N ++ C+E
Sbjct: 259 QVLPKRISENWIAKKQQLISGDQFTAAYNKILDEKNETVKKCEE 302
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 97 NEILHKSLSLLTEENLKYKKLLDEANSFIE 126
NE++ K L LTEE YK + E ++ +E
Sbjct: 818 NEVMVKKLEALTEEVENYKPRIVETHALLE 847
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 26.6 bits (56), Expect = 8.5
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 64 ISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANS 123
+ EN L LE+ ++ AE R+ EA K+ L +E K +K E +
Sbjct: 93 LEENSLNLEIKQAEAMEIDAELERQVEMEADKLEREHRKNQKNLKKEEKKQEK-QQEMEN 151
Query: 124 FIEVCKELMS 133
F +V +E+ S
Sbjct: 152 FFKVFEEIRS 161
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 26.6 bits (56), Expect = 8.5
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 60 LDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEEN 111
+D+W ++ + V E +W V EKR + L L E K L L E N
Sbjct: 1699 IDRWFETKNM-MAVACELHWSVPREKRSRQLECRLKE-----KLLQALRENN 1744
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 27 LLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISEND 68
L KK SI+ F N + KK+N + LD +S+N+
Sbjct: 24 LTRSSKKSSIESKFLIPNHLQKKENGNSRSTTGLDMLLSQNN 65
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence
of males (increasedx chromosome loss) protein 1, isoform
a protein.
Length = 1281
Score = 26.6 bits (56), Expect = 8.5
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Query: 61 DKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDE 120
DK + E L ET W V + + A+ + + L + SLLT++ + LL
Sbjct: 887 DKEVLEEKKALSHKLETEWNEVKKIAQVAMKDFTKAEKELLRLESLLTKKQYERHSLLHS 946
Query: 121 ANSFIEVCKELMSDTADDTGIEIDDTKI 148
++ L S + D E DD I
Sbjct: 947 V-KLGQIALPLKSGSMADVEYEEDDGDI 973
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.307 0.126 0.342
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,038,164
Number of Sequences: 27539
Number of extensions: 163298
Number of successful extensions: 569
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 556
Number of HSP's gapped (non-prelim): 36
length of query: 161
length of database: 12,573,161
effective HSP length: 76
effective length of query: 85
effective length of database: 10,480,197
effective search space: 890816745
effective search space used: 890816745
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 56 (26.6 bits)
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