Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000659-TA|BGIBMGA000659-PA|IPR013120|Male sterility
C-terminal, IPR004262|Male sterility
(432 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to... 145 4e-35
At5g22500.1 68418.m02626 acyl CoA reductase, putative / male-ste... 133 2e-31
At3g56700.1 68416.m06307 male sterility protein, putative simila... 105 6e-23
At3g44560.1 68416.m04789 acyl CoA reductase, putative similar to... 91 1e-18
At3g11980.1 68416.m01482 male sterility protein 2 (MS2) identica... 89 5e-18
At3g44540.1 68416.m04787 acyl CoA reductase, putative similar to... 80 3e-15
At5g22420.1 68418.m02615 acyl CoA reductase, putative similar to... 77 2e-14
At4g33790.1 68417.m04796 acyl CoA reductase, putative similar to... 68 1e-11
At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase fam... 40 0.002
At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase fam... 38 0.013
At1g75280.1 68414.m08745 isoflavone reductase, putative identica... 36 0.052
At1g75290.1 68414.m08746 isoflavone reductase, putative similar ... 35 0.12
At5g02630.1 68418.m00199 expressed protein 34 0.16
At2g28760.2 68415.m03498 NAD-dependent epimerase/dehydratase fam... 33 0.49
At2g28760.1 68415.m03497 NAD-dependent epimerase/dehydratase fam... 33 0.49
At1g19540.1 68414.m02434 isoflavone reductase, putative similar ... 33 0.49
At1g09490.1 68414.m01063 cinnamyl-alcohol dehydrogenase family /... 33 0.49
At5g16340.1 68418.m01910 AMP-binding protein, putative similar t... 32 0.85
At1g31120.1 68414.m03808 potassium transporter family protein si... 31 1.1
At1g25460.1 68414.m03161 oxidoreductase family protein similar t... 31 2.0
At2g39480.1 68415.m04845 ABC transporter family protein related ... 30 2.6
At3g55320.1 68416.m06144 ABC transporter family protein similar ... 30 3.4
At1g75300.1 68414.m08747 isoflavone reductase, putative identica... 30 3.4
At5g16370.1 68418.m01913 AMP-binding protein, putative similar t... 29 4.5
At3g62830.1 68416.m07059 NAD-dependent epimerase/dehydratase fam... 29 4.5
At3g56990.1 68416.m06344 glycine-rich protein conserved hypothet... 29 4.5
At3g53520.2 68416.m05910 NAD-dependent epimerase/dehydratase fam... 29 4.5
At3g53520.1 68416.m05909 NAD-dependent epimerase/dehydratase fam... 29 4.5
At1g31670.1 68414.m03888 copper amine oxidase, putative similar ... 29 4.5
At4g13660.1 68417.m02124 pinoresinol-lariciresinol reductase, pu... 29 6.0
At4g10960.1 68417.m01781 UDP-glucose 4-epimerase, putative / UDP... 29 6.0
At1g59870.1 68414.m06745 ABC transporter family protein similar ... 29 6.0
At1g30420.1 68414.m03718 ATP-binding cassette transport protein,... 29 6.0
At5g59290.1 68418.m07429 UDP-glucuronic acid decarboxylase (UXS3... 29 7.9
At5g06060.1 68418.m00671 tropinone reductase, putative / tropine... 29 7.9
At3g46440.1 68416.m05034 NAD-dependent epimerase/dehydratase fam... 29 7.9
At2g43270.1 68415.m05378 F-box family protein contains Pfam PF00... 29 7.9
At1g63180.1 68414.m07140 UDP-glucose 4-epimerase, putative / UDP... 29 7.9
At1g12780.1 68414.m01484 UDP-glucose 4-epimerase / UDP-galactose... 29 7.9
>At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 402
Score = 145 bits (352), Expect = 4e-35
Identities = 108/362 (29%), Positives = 181/362 (50%), Gaps = 40/362 (11%)
Query: 10 FYAGRNILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRPKKAKTVAQRLE-DLQRLPLF 68
F + ILVTG TGF+ KV VEK+L P + +Y+L+R + +RL ++ LF
Sbjct: 8 FLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRTEVFEKELF 67
Query: 69 DRLK----NERPNAL--NKIKAIQGDVLFEDFGLSNLEI-ENLSKEVTVVFHFAATLRLE 121
L+ +E+ N L K+ ++ GD+ + G+++ + E + KE+ +V + AAT +
Sbjct: 68 KVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVNVAATTNFD 127
Query: 122 APLKDNVNMNTSGTLRTIKVAKKLKNLQIFVHLSTAF-CYPDYEVLGEKLYA-PPAKPEH 179
+ +NT G L + AKK +Q+ +H+STA+ C ++ EK + + E+
Sbjct: 128 ERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFIMEEIRNEN 187
Query: 180 VMRL------------IEWLDDRQ-----LTLLTPSL------LGPHPNCYTFSKRLAEN 216
++L ++ L+++ +TL L L PN Y F+K + E
Sbjct: 188 GLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYVFTKSMGEM 247
Query: 217 VVEQAYKDLPIVIARPSIVCPSYSEPMPGWVDNLNGPVGVMIGAGKGVIRTMLCDGTLSA 276
++ + ++LP+VI RP+++ + SEP PGW++ L V+I GKGV++ L D
Sbjct: 248 LLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVC 307
Query: 277 QVIPVDXXXXXXXXXGMIEGTKKEK--SLTIPVYNVNIGHQKPMTWGDVLTVAKDYGRKY 334
+IPVD MI K S VY+V HQ P+T+G++ +A Y K
Sbjct: 308 DMIPVD-----MVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYFTKN 362
Query: 335 PL 336
PL
Sbjct: 363 PL 364
>At5g22500.1 68418.m02626 acyl CoA reductase, putative /
male-sterility protein, putative similar to acyl CoA
reductase [Simmondsia chinensis] GI:5020215; contains
Pfam profile PF03015: Male sterility protein; identical
to cDNA male sterility 2-like protein GI:1491614
Length = 491
Score = 133 bits (322), Expect = 2e-31
Identities = 99/357 (27%), Positives = 167/357 (46%), Gaps = 33/357 (9%)
Query: 10 FYAGRNILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRPKKAKTVAQRL-EDLQRLPLF 68
F + IL+TG GF+ KVLVEK+L P + +Y+L+R K+ QRL ++ + LF
Sbjct: 8 FLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVMEIDLF 67
Query: 69 DRLKN----ERPNAL--NKIKAIQGDVLFEDFGLSNLE-IENLSKEVTVVFHFAATLRLE 121
L+N + NAL KI + GD+ ++ GL + + I+ + E+ ++ + AAT +
Sbjct: 68 KVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAATTNFD 127
Query: 122 APLKDNVNMNTSGTLRTIKVAKKLKNLQIFVHLSTAFCYPDYEVL--------GEKLYAP 173
+ +NT G L + AKK Q+ +H+STA+ + L GE L
Sbjct: 128 ERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGETLSGD 187
Query: 174 ---PAKPEHVM---RLIEWLD--DRQLTL------LTPSLLGPHPNCYTFSKRLAENVVE 219
EH + +L E D D +++ + + L PN Y F+K + E ++
Sbjct: 188 RELDINIEHDLMKQKLKELQDCSDEEISQTMKDFGMARAKLHGWPNTYVFTKAMGEMLMG 247
Query: 220 QAYKDLPIVIARPSIVCPSYSEPMPGWVDNLNGPVGVMIGAGKGVIRTMLCDGTLSAQVI 279
+ ++LP+VI RP+++ + +EP PGW++ L V++ GKG ++ L D +I
Sbjct: 248 KYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSNSVFDLI 307
Query: 280 PVDXXXXXXXXXGMIEGTKKEKSLTIPVYNVNIGHQKPMTWGDVLTVAKDYGRKYPL 336
P D +Y+V + P+T+G + Y K PL
Sbjct: 308 PADMVVNAMVAAATAHSGDTGIQ---AIYHVGSSCKNPVTFGQLHDFTARYFAKRPL 361
>At3g56700.1 68416.m06307 male sterility protein, putative similar
to SP|Q08891 Male sterility protein 2 {Arabidopsis
thaliana}; contains Pfam profile PF03015: Male sterility
protein
Length = 527
Score = 105 bits (252), Expect = 6e-23
Identities = 94/345 (27%), Positives = 152/345 (44%), Gaps = 20/345 (5%)
Query: 2 SSATSVRDFYAGRNILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRPKKAKTVAQRLED 61
S + F G++ LVTG TGF+ KVL+EKLL EIG +++LMR K ++ +RL D
Sbjct: 72 SDGIGIVRFLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKRLYD 131
Query: 62 -LQRLPLFDRLKNERPNALN-----KIKAIQGDVLFEDFGLSNLEIENL-SKEVTVVFHF 114
+ LF LK ++ K+ + GD+ ++ G+ + EI N+ S+E+ V+
Sbjct: 132 EIISSDLFKLLKQMHGSSYEAFMKRKLIPVIGDIEEDNLGIKS-EIANMISEEIDVIISC 190
Query: 115 AATLRLEAPLKDNVNMNTSGTLRTIKVAKKLKNLQIFVHLSTAF-CYPDYEVLGE-KLYA 172
+ +++N G V K + + L D + E KL +
Sbjct: 191 GGRTTFDDRYDSALSVNALGPAY---VTGKREGTVLETPLCIGENITSDLNIKSELKLAS 247
Query: 173 PPAKPEHVMRLIEWLDDRQLTLLTPSLLGPHPNCYTFSKRLAENVVEQAYKDLPIVIARP 232
+ I+ L ++L G N YTF+K + E V+ +LP+VI RP
Sbjct: 248 EAVRKFRGREEIKKL--KELGFERAQHYG-WENSYTFTKAIGEAVIHSKRGNLPVVIIRP 304
Query: 233 SIVCPSYSEPMPGWVDNLNGPVGVMIGAGKGVIRTMLCDGTLSAQVIPVDXXXXXXXXXG 292
SI+ SY+EP PGW+ +++ KG I D +IPVD
Sbjct: 305 SIIESSYNEPFPGWIQGTRMADPIILAYAKGQISDFWADPQSLMDIIPVDMVANAAIAAM 364
Query: 293 MIEGTKKEKSLTIPVYNV-NIGHQKPMTWGDVLTVAKDYGRKYPL 336
G + VYN+ + H PM G ++ ++ + +PL
Sbjct: 365 AKHGCGVPE---FKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFPL 406
>At3g44560.1 68416.m04789 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 449
Score = 91.5 bits (217), Expect = 1e-18
Identities = 61/178 (34%), Positives = 93/178 (52%), Gaps = 18/178 (10%)
Query: 10 FYAGRNILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRPKKAKTVAQRL------EDLQ 63
F + ILVTG TGF+ KV VEK+L P + +Y+++R + +RL +DL
Sbjct: 8 FLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFEKDLF 67
Query: 64 RLPLFDRLKNERPNAL--NKIKAIQGDVLFEDFGL--SNLEIENLSKEVTVVFHFAATLR 119
++ L D L +E+ N L K+ + GD+ + G+ SNL E + KE+ +V + AAT
Sbjct: 68 KV-LRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLR-ERMQKEIDIVVNVAATTN 125
Query: 120 LEAPLKDNVNMNTSGTLRTIKVAKKLKNLQIFVHLSTAFCYPDYEVLGEKLYAPPAKP 177
+ + +NT G L + AKK Q+ +H+STA+ V GEK P KP
Sbjct: 126 FDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAY------VCGEKPGLLPEKP 177
Score = 66.5 bits (155), Expect = 3e-11
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 204 PNCYTFSKRLAENVVEQAYKDLPIVIARPSIVCPSYSEPMPGWVDNLNGPVGVMIGAGKG 263
PN Y F+K + E ++ ++LP+VI RP+++ + EP PGW++ L V+I GKG
Sbjct: 235 PNTYVFTKSMGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKG 294
Query: 264 VIRTMLCDGTLSAQVIPVD 282
V++ L D +IP D
Sbjct: 295 VLKCFLVDVNSVCDMIPAD 313
>At3g11980.1 68416.m01482 male sterility protein 2 (MS2) identical
to male sterility protein 2 (MS2) SP:Q08891 (Arabidopsis
thaliana)
Length = 616
Score = 89.0 bits (211), Expect = 5e-18
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 6/164 (3%)
Query: 1 MSSATSVRDFYAGRNILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRPKKAKTVAQRLE 60
M + F G+ L+TG TGF+ KVL+EK+L P++ +Y+L++ K + +RL+
Sbjct: 118 MKEGLGIISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLK 177
Query: 61 -DLQRLPLFDRLKNERPNA-----LNKIKAIQGDVLFEDFGLSNLEIENLSKEVTVVFHF 114
++ LF+ LK + L K+ + G++ + GL E ++KEV V+ +
Sbjct: 178 NEVLDAELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQADSAEEIAKEVDVIINS 237
Query: 115 AATLRLEAPLKDNVNMNTSGTLRTIKVAKKLKNLQIFVHLSTAF 158
AA +++NT G + AKK K L++F+ +STA+
Sbjct: 238 AANTTFNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAY 281
Score = 56.8 bits (131), Expect = 3e-08
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Query: 207 YTFSKRLAENVVEQAYKDLPIVIARPSIVCPSYSEPMPGWVDNLNGPVGVMIGAGKGVIR 266
Y F+K + E ++ D+P+VI RPS++ +Y +P PGW++ +++ GKG +
Sbjct: 357 YVFTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQLT 416
Query: 267 TMLCDGTLSAQVIPVDXXXXXXXXXGMIEG-TKKEKSLTIPVYNVNIGHQKPMTWGDVLT 325
L D V+P D G + I VY + P+ + D+
Sbjct: 417 GFLVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAE 476
Query: 326 VAKDYGRKYP 335
+ ++ + P
Sbjct: 477 LLYNHYKTSP 486
>At3g44540.1 68416.m04787 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 433
Score = 79.8 bits (188), Expect = 3e-15
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 204 PNCYTFSKRLAENVVEQAYKDLPIVIARPSIVCPSYSEPMPGWVDNLNGPVGVMIGAGKG 263
PN Y F+K + E ++ ++LPIVI RP+++ ++SEP PGW++ L V++ GKG
Sbjct: 234 PNTYVFTKSMGEMLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKG 293
Query: 264 VIRTMLCDGTLSAQVIPVDXXXXXXXXXGMIEGTKKEKSLTIPVYNVNIGHQKPMTWGDV 323
++ L D +IPVD I K VY+V + P+T+ +
Sbjct: 294 RLKCFLADPNSVLDLIPVDMVANAMVTAAAIHAGKLGSQ---TVYHVGSSCKNPITFEQI 350
Query: 324 LTVAKDYGRKYPL 336
+A Y K PL
Sbjct: 351 HDLAASYFTKNPL 363
Score = 76.2 bits (179), Expect = 4e-14
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 16/224 (7%)
Query: 10 FYAGRNILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRPKKAKTVAQRL-EDLQRLPLF 68
F + ILVTG GF+ KV VEK+L P++ +++L+R ++ QR ++ LF
Sbjct: 8 FLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLEKDLF 67
Query: 69 DRLKN----ERPNAL--NKIKAIQGDVLFEDFGLSNLE-IENLSKEVTVVFHFAATLRLE 121
LKN E A K+ I GD+ ++ G+ + ++++ E+ ++ + AAT +
Sbjct: 68 RVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAATTNFD 127
Query: 122 APLKDNVNMNTSGTLRTIKVAKKLKNLQIFVHLSTAFCYPDYEVLGEKLYAPPAKPEHVM 181
+++NT G L + AKK Q+ +H+STA+ V GEK K H+
Sbjct: 128 ERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAY------VRGEKSGLLHEKTFHMG 181
Query: 182 RLIEWLDDRQLTLLTPSLLGPHPNCYTFSKRLAENVVEQAYKDL 225
+ R+L + T L + +E + Q+ KDL
Sbjct: 182 ETLN--GHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDL 223
>At5g22420.1 68418.m02615 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 409
Score = 77.4 bits (182), Expect = 2e-14
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 204 PNCYTFSKRLAENVVEQAYKDLPIVIARPSIVCPSYSEPMPGWVDNLNGPVGVMIGAGKG 263
PN Y F+K + E ++ + +PIVI RP+I+ ++S+P PGW++ L V+I GKG
Sbjct: 161 PNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGKG 220
Query: 264 VIRTMLCDGTLSAQVIPVDXXXXXXXXXGMIEGTKKEKSLTIPVYNVNIGHQKPMTWGDV 323
+++ L D +IPVD I S + VY+V +Q P+ + +
Sbjct: 221 ILKCFLVDQKTVCDIIPVDMVVNAMIA---IAADHCHDSGSHTVYHVGSSNQNPVIYKQI 277
Query: 324 LTVAKDYGRKYPL 336
+ Y K PL
Sbjct: 278 YEMMSRYFMKSPL 290
Score = 49.2 bits (112), Expect = 5e-06
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 10 FYAGRNILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRPKKAKTVAQRLE 60
F R ILVTG +GF+ KVLVE++L P + +Y+L+R K+ QR +
Sbjct: 8 FLENRTILVTGASGFLAKVLVERILRLQPNVKRLYLLVRASDKKSAEQRYD 58
>At4g33790.1 68417.m04796 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein;
No start codon identified, may contain anomalous
splicing at 5' end.
Length = 380
Score = 68.1 bits (159), Expect = 1e-11
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 204 PNCYTFSKRLAENVVEQAYKDLPIVIARPSIVCPSYSEPMPGWVDNLNGPVGVMIGAGKG 263
PN Y F+K + E +V ++L +V+ RPSI+ ++ EP PGW + + + +G GKG
Sbjct: 125 PNTYVFTKAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKG 184
Query: 264 VIRTMLCDGTLSAQVIPVDXXXXXXXXXGMIEGTKKEKSLTIPVYNVNIGHQKPM 318
+ LCD + V+P D + K+E+ +Y+V + PM
Sbjct: 185 KLTCFLCDLDAVSDVMPADMVVNSILVSMAAQAGKQEEI----IYHVGSSLRNPM 235
Score = 36.3 bits (80), Expect = 0.040
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 107 EVTVVFHFAATLRLEAPLKDNVNMNTSGTLRTIKVAKKLKNLQIFVHLSTAF 158
+V + + AAT + + + +NT G L + AK+ ++I VH+STA+
Sbjct: 4 QVDAIVNLAATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAY 55
>At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461,
Saccharopolyspora spinosa GI:15077647, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 664
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 11 YAGRNILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRPKKAKTVAQRLEDLQRLPLFDR 70
Y +NIL+TG GF+ + +L+ S P+ ++ L +L
Sbjct: 4 YKPKNILITGAAGFIASHVANRLVRSYPD-----------------YKIVVLDKLDYCSN 46
Query: 71 LKNERPNALN-KIKAIQGDVLFEDFGLSNLEIENLSKEVTVVFHFAATLRLEAPLKDNVN 129
LKN P+ + K ++GD+ D L N + +++E+ + HFAA ++ ++
Sbjct: 47 LKNLNPSKSSPNFKFVKGDIASAD--LVNYLL--ITEEIDTIMHFAAQTHVDNSFGNSFE 102
Query: 130 M---NTSGTLRTIKVAKKLKNLQIFVHLSTAFCY 160
N GT ++ K ++ F+H+ST Y
Sbjct: 103 FTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVY 136
>At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 669
Score = 37.9 bits (84), Expect = 0.013
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 11 YAGRNILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRPKKAKTVAQRLEDLQRLPLFDR 70
Y +NIL+TG GF+ + +L+ S P+ ++ L +L
Sbjct: 4 YTPKNILITGAAGFIASHVANRLIRSYPD-----------------YKIVVLDKLDYCSN 46
Query: 71 LKNERPNALN-KIKAIQGDVLFEDFGLSNLEIENLSKEVTVVFHFAATLRLEAPLKDNVN 129
LKN P+ + K ++GD+ D +++L I ++ + + HFAA ++ ++
Sbjct: 47 LKNLNPSKHSPNFKFVKGDIASADL-VNHLLI---TEGIDTIMHFAAQTHVDNSFGNSFE 102
Query: 130 M---NTSGTLRTIKVAKKLKNLQIFVHLSTAFCY 160
N GT ++ K ++ F+H+ST Y
Sbjct: 103 FTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVY 136
>At1g75280.1 68414.m08745 isoflavone reductase, putative identical
to SP|P52577 Isoflavone reductase homolog P3 (EC
1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile
PF02716: isoflavone reductase
Length = 310
Score = 35.9 bits (79), Expect = 0.052
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 16 ILVTGGTGFMGKVLVE---KLLYSVPEIGNVYILMRPKKAKTVAQRLEDLQRLPLFDRLK 72
ILV GGTG++GK LVE K +S + L P K KTV Q +DL L L
Sbjct: 8 ILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTV-QSFKDLGVTILHGDL- 65
Query: 73 NERPNALNKIKAIQGDVLFEDFGLSNLEIENLSKEVTVVFHFAATLRLEAPLKDNVNMNT 132
N+ + + IK Q DV+ G +++I + +K ++ + A ++ P + V+++
Sbjct: 66 NDHESLVKAIK--QVDVVISTVG--SMQILDQTKIISAIKE-AGNVKRFLPSEFGVDVDR 120
Query: 133 SGTLRTIKVA 142
+ + K A
Sbjct: 121 TSAVEPAKSA 130
>At1g75290.1 68414.m08746 isoflavone reductase, putative similar to
SP|P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-)
{Arabidopsis thaliana}; contains Pfam profile PF02716:
Isoflavone reductase
Length = 323
Score = 34.7 bits (76), Expect = 0.12
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 16 ILVTGGTGFMGKVLVE---KLLYSVPEIGNVYILMRPKKAKTVAQRLEDLQRLPLFDRLK 72
ILV GGTG +GK+++E K +S + L P K KTV Q +D L L
Sbjct: 8 ILVIGGTGHIGKLIIEASVKAGHSTLALVREASLSDPNKGKTV-QNFKDFGVTLLHGDL- 65
Query: 73 NERPNALNKIKAIQGDVLFEDFGLSNLEIENLSKEVTVVFHFAATLRLEAPLKDNVNMNT 132
N+ + + IK Q DV+ G +++I + +K ++ + A ++ P + ++++
Sbjct: 66 NDHESLVKAIK--QADVVISTVG--SMQILDQTKIISAIKE-AGNVKRFLPSEFGMDVDK 120
Query: 133 SGTLRTIKVA 142
S + K A
Sbjct: 121 SSAVEPAKSA 130
>At5g02630.1 68418.m00199 expressed protein
Length = 428
Score = 34.3 bits (75), Expect = 0.16
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 327 AKDYGRKYPLSWPLWYPNGDITTNYTLHEIRRIFYHLVPAYCIDFLLFLMGQKRFLFVVH 386
+K Y P + L++ N T ++ I++ L P D+LL Q L++V
Sbjct: 118 SKSYPITSPNDYSLFFANCVPETRVSMKVHTEIYHDLYPNGSRDYLLAGSAQLPGLYLVF 177
Query: 387 WVCKILFWLLILSFVAAYFEPVR--YVLSQGEPVVKYLPFVASAVFKN 432
++C + F L F + + V+ ++L +VK L + +AV+K+
Sbjct: 178 FLCYLSFLCFWLCFCWNHKQIVKRIHLLMTALLLVKSLTLICAAVYKH 225
>At2g28760.2 68415.m03498 NAD-dependent epimerase/dehydratase
family protein similar to UDP-glucuronic acid
decarboxylase Uxs1p from Filobasidiella neoformans
GI:14318327; contains Pfam profile PF01370 NAD
dependent epimerase/dehydratase family
Length = 343
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 10 FYAGRNILVTGGTGFMGKVLVEKLL 34
F + ILVTGG GF+G LV+KL+
Sbjct: 27 FQSNMRILVTGGAGFIGSHLVDKLM 51
>At2g28760.1 68415.m03497 NAD-dependent epimerase/dehydratase
family protein similar to UDP-glucuronic acid
decarboxylase Uxs1p from Filobasidiella neoformans
GI:14318327; contains Pfam profile PF01370 NAD
dependent epimerase/dehydratase family
Length = 343
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 10 FYAGRNILVTGGTGFMGKVLVEKLL 34
F + ILVTGG GF+G LV+KL+
Sbjct: 27 FQSNMRILVTGGAGFIGSHLVDKLM 51
>At1g19540.1 68414.m02434 isoflavone reductase, putative similar to
SP|P52577; contains isoflavone reductase domain PF02716
Length = 310
Score = 32.7 bits (71), Expect = 0.49
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 16 ILVTGGTGFMGKVLVE---KLLYSVPEIGNVYILMRPKKAKTVAQRLEDLQRLPLFDRLK 72
ILV G TG +GKVLVE K ++ + L P KA+ V +R +DL L+ L
Sbjct: 5 ILVIGATGLIGKVLVEESAKSGHATFALVREASLSDPVKAQLV-ERFKDLGVTILYGSL- 62
Query: 73 NERPNALNKIKAIQGDVLFEDFGLSNLEIENLSKEVTVV 111
+++ + + IK Q DV+ G EI N + + +
Sbjct: 63 SDKESLVKAIK--QVDVVISAVGRFQTEILNQTNIIDAI 99
>At1g09490.1 68414.m01063 cinnamyl-alcohol dehydrogenase family /
CAD family similar to cinnamyl alcohol dehydrogenase,
Eucalyptus gunnii [gi:1143445], CPRD14 protein, Vigna
unguiculata [gi:1854445]; Location of EST gb|H37170,
gb|H77227 and gb|AA605565
Length = 322
Score = 32.7 bits (71), Expect = 0.49
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 197 PSLLGPHPNCYTFSKRLAENVVEQAYKD--LPIVIARPSIVCPSYSEP 242
PSL N Y+ SK LAEN Q KD + +V+ P +C +P
Sbjct: 153 PSLCRETKNWYSLSKILAENAAWQFAKDNGIDMVVLNPGFICGPLLQP 200
>At5g16340.1 68418.m01910 AMP-binding protein, putative similar to
AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
adenosine monophosphate binding protein 6 AMPBP6
(AMPBP6) GI:20799720
Length = 550
Score = 31.9 bits (69), Expect = 0.85
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 14 RNILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRP 49
++I++TGG + V VE +LY++P + V ++ RP
Sbjct: 440 KDIIITGGEN-VSSVEVETVLYTIPAVNEVAVVARP 474
>At1g31120.1 68414.m03808 potassium transporter family protein
similar to HAK2 [Hordeum vulgare] GI:7108599, potassium
transporter [Arabidopsis thaliana]
gi|2654088|gb|AAB87687; KUP/HAK/KT Transporter family
member, PMID:11500563; contains Pfam profile PF02705: K+
potassium transporter
Length = 796
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 386 HWVCKILFWLLILSFVAAYFEPVRYVLSQGEPVVKYLPFVASAVF 430
HWV +LF LL L YF V + ++QG ++P V +A F
Sbjct: 477 HWVLVLLFTLLSLVVECTYFSAVLFKVNQG----GWVPLVIAAAF 517
>At1g25460.1 68414.m03161 oxidoreductase family protein similar to
dihydroflavonol 4-reductase GI:1332411 from [Rosa
hybrida], cinnamoyl CoA reductase from Pinus taeda
[gi:17978649], Eucalyptus gunnii [gi:2058311]
Length = 320
Score = 30.7 bits (66), Expect = 2.0
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 24/133 (18%)
Query: 17 LVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRPKKAKTVAQRLEDLQRLPLFDRLKNERP 76
LVTGGT F+ +++ LL E G+ Y+ +T + ED +++ LK
Sbjct: 5 LVTGGTSFIASHVIKSLL----EFGH-YV-------RTTVRDSEDEEKVGFLWDLK---- 48
Query: 77 NALNKIKAIQGDVLFEDFGLSNLEIENLSKEVTVVFHFAA--TLRLEAPLKDNVNMNTSG 134
A ++K + D+ E + V VFH A+ ++RL+ D + N SG
Sbjct: 49 GAKERLKIFEADLTIEG------SFDEAVNGVDGVFHIASRVSVRLDNNNLDKFDPNISG 102
Query: 135 TLRTIKVAKKLKN 147
T+ + K +N
Sbjct: 103 TMNVMNSCAKSRN 115
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 87 GDVLFEDFGLSNLEIENLSKEVTVVFHFAATLRLEAPLKDNVNMNTSGTLRTIKVAKKLK 146
G+VL + + NL++E L ++ +V A L L +++N+ TL I+ A K
Sbjct: 469 GEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLS--IRENIAYGRDATLDQIEEAAKKA 526
Query: 147 NLQIFV 152
+ F+
Sbjct: 527 HAHTFI 532
>At3g55320.1 68416.m06144 ABC transporter family protein similar to
multidrug resistant P-glycoprotein pmdr1 GI:4204793 from
[Solanum tuberosum]
Length = 1408
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 87 GDVLFEDFGLSNLEIENLSKEVTVVFHFAATLRLEAPLKDNVNMNTSGTLRTIKVAKKLK 146
G+VL + + NL++E L ++ +V A L L +++N+ TL I+ A K
Sbjct: 471 GEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLS--IRENIAYGRDATLDQIEEAAKNA 528
Query: 147 NLQIFV 152
+ F+
Sbjct: 529 HAHTFI 534
>At1g75300.1 68414.m08747 isoflavone reductase, putative identical
to SP|P52577 Isoflavone reductase homolog P3 (EC
1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile
PF02716: Isoflavone reductase
Length = 322
Score = 29.9 bits (64), Expect = 3.4
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 16 ILVTGGTGFMGKVLVE-KLLYSVPEIGNV--YILMRPKKAKTVAQRLEDLQRLPLFDRLK 72
ILV GGTG+MG+ +VE P V L P K+KT+ Q +DL L L
Sbjct: 8 ILVIGGTGYMGEFIVEGSAKAGNPTFALVREASLSDPVKSKTI-QSFKDLGVTILHGDL- 65
Query: 73 NERPNALNKIKAIQGDVLFEDFG 95
N+ + + IK Q DV+ G
Sbjct: 66 NDHESLVKAIK--QVDVVISTIG 86
>At5g16370.1 68418.m01913 AMP-binding protein, putative similar to
AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
cDNA adenosine monophosphate binding protein 5 AMPBP5
(AMPBP5) GI:20799718
Length = 552
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 14 RNILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRP 49
++I++TGG + V VE +LY+ P + V ++ RP
Sbjct: 440 KDIIITGGEN-VSSVEVETVLYTNPAVNEVAVVARP 474
>At3g62830.1 68416.m07059 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family; contains non-consensus CA
donor splice site at exon 1 and TA acceptor splice site
at exon 2
Length = 445
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 13 GRNILVTGGTGFMGKVLVEKLL 34
G ++VTGG GF+G LV++L+
Sbjct: 118 GLRVVVTGGAGFVGSHLVDRLM 139
>At3g56990.1 68416.m06344 glycine-rich protein conserved
hypothetical protein SPCC330.09 - Schizosaccharomyces
pombe, PIR:T41319
Length = 711
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 34 LYSVPEIGNVYILMRPKKAKTVAQRLEDLQRLPLFDRLKNERPNALNKIKA 84
LY+V NV + PKK + + + +QR+ L LK E A +IKA
Sbjct: 18 LYNVSSAPNVPTWLNPKKQRALRKNPHYMQRVELIQELKFE--TATTRIKA 66
>At3g53520.2 68416.m05910 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 426
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 16 ILVTGGTGFMGKVLVEKLL 34
I+VTGG GF+G LV+KL+
Sbjct: 122 IVVTGGAGFVGSHLVDKLI 140
>At3g53520.1 68416.m05909 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 345
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 16 ILVTGGTGFMGKVLVEKLL 34
I+VTGG GF+G LV+KL+
Sbjct: 122 IVVTGGAGFVGSHLVDKLI 140
>At1g31670.1 68414.m03888 copper amine oxidase, putative similar to
amine oxidase [copper-containing] precursor [Pisum
sativum] SWISS-PROT:Q43077
Length = 741
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 16 ILVTGGTGFMGKVLVEKLLYSVPEI--GNVYILMRPKKAKTVAQRLEDLQRLPLFDRLKN 73
++ T G+ G+ E+L+ P G+V +RP + T+ L+ ++ DR +
Sbjct: 238 VVTTSTMGWFGEAKPERLIKKRPFYLNGSVNTYLRPIEGMTIIVNLDQMKVTKFRDRFTS 297
Query: 74 ERPNA 78
PNA
Sbjct: 298 PLPNA 302
>At4g13660.1 68417.m02124 pinoresinol-lariciresinol reductase,
putative similar to pinoresinol-lariciresinol reductase
TH1 [Tsuga heterophylla][GI:7578915]; contains
isoflavone reductase domain PF02716
Length = 317
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 16 ILVTGGTGFMGKVLVEKLLYSVPEIGNVYILMRPKKAKTVAQRLEDLQRLPLFDRL 71
+LV GGTG +G+ +V L E Y+L RP+ + +E +Q L F RL
Sbjct: 12 VLVVGGTGSLGRRIVSACL---AEGHETYVLQRPE----IGVDIEKVQLLLSFKRL 60
>At4g10960.1 68417.m01781 UDP-glucose 4-epimerase, putative /
UDP-galactose 4-epimerase, putative / Galactowaldenase,
putative similar to UDP-galactose 4-epimerase from
Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba
GI:3021357 [AJ005082]
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Query: 14 RNILVTGGTGFMGKVLVEKLL---YSVPEIGNV 43
RN+LV+GG G++G V +LL YSV + N+
Sbjct: 4 RNVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNL 36
>At1g59870.1 68414.m06745 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1469
Score = 29.1 bits (62), Expect = 6.0
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 62 LQRLPLFDRLKNERPNALNKIKAIQGDVLFEDFGLSNLEIENLSKEVTVVFHFAATLRLE 121
+++LP + RL+ NA+ + ++ ++ ++ L+ E+ K + +VF A
Sbjct: 58 IEKLPTYSRLRTTLMNAVVEDDVYGNQLMSKEVDVTKLDGEDRQKFIDMVFKVAE----- 112
Query: 122 APLKDNVNMNTSGTLRTIKVAKKLKNLQI-FVHLS-TAFCYPDYEVLGEKLYAPPAKPEH 179
+DN + T R +V KL +++ + HL+ A CY L L E
Sbjct: 113 ---QDNERILTKLRNRIDRVGIKLPTVEVRYEHLTIKADCYTGNRSLPTLLNVVRNMGES 169
Query: 180 VMRL--IEWLDDRQLTLL 195
+ + I++ QLT+L
Sbjct: 170 ALGMIGIQFAKKAQLTIL 187
>At1g30420.1 68414.m03718 ATP-binding cassette transport protein,
putative contains Pfam profiles PF00005: ABC
transporter, PF00664: ABC transporter transmembrane
region
Length = 1488
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 108 VTVVFHFAATLRLEAPLKDNVNMNTSGTLRTIKVAKKLKNLQIFVHLSTAFCYPDYEVLG 167
V V+ A L L PLK+++N + + + L + + V++ YPDY +L
Sbjct: 149 VYVLVADAVLLDLVLPLKNSINRTALYLCISSRCCQALFGILLLVYIPELDLYPDYHILN 208
Query: 168 EK 169
+
Sbjct: 209 NE 210
>At5g59290.1 68418.m07429 UDP-glucuronic acid decarboxylase (UXS3)
identical to UDP-glucuronic acid decarboxylase
[Arabidopsis thaliana] GI:14595666; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family; identical to cDNA UDP-glucuronic acid
decarboxylase (UXS3) GI:14595665
Length = 342
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 16 ILVTGGTGFMGKVLVEKLL 34
IL++GG GF+G LV+KL+
Sbjct: 32 ILISGGAGFIGSHLVDKLM 50
>At5g06060.1 68418.m00671 tropinone reductase, putative / tropine
dehydrogenase, putative similar to tropinone reductase
SP:P50165 from [Datura stramonium]
Length = 264
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 5 TSVRDFYAGRNILVTGGTGFMGKVLVEKL 33
T R AG+ LVTGGT +G+ +VE+L
Sbjct: 3 TDKRWSLAGKTALVTGGTRGIGRAVVEEL 31
>At3g46440.1 68416.m05034 NAD-dependent epimerase/dehydratase
family protein similar to UDP-glucuronic acid
decarboxylase Uxs1p from Filobasidiella neoformans
GI:14318327; contains Pfam profile PF01370 NAD
dependent epimerase/dehydratase family
Length = 341
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 16 ILVTGGTGFMGKVLVEKLL 34
IL++GG GF+G LV+KL+
Sbjct: 31 ILISGGAGFIGSHLVDKLM 49
>At2g43270.1 68415.m05378 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 387
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 215 ENVVEQAYKDLPIVIARPSIVCPSY-SEPMPGWVDNLN 251
E ++ Y I RPS+ C P PGW++ LN
Sbjct: 67 EEEIQMVYLHCDIDATRPSLTCEGLVCIPAPGWINVLN 104
>At1g63180.1 68414.m07140 UDP-glucose 4-epimerase, putative /
UDP-galactose 4-epimerase, putative / Galactowaldenase,
putative strong similarity to SP|Q42605 [GI:1143392]
from [Arabidopsis thaliana] (Arch. Biochem. Biophys.
327 (1), 27-34 (1996))
Length = 351
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 14 RNILVTGGTGFMGKVLVEKLL 34
+NILVTGG GF+G V +LL
Sbjct: 7 QNILVTGGAGFIGTHTVVQLL 27
>At1g12780.1 68414.m01484 UDP-glucose 4-epimerase / UDP-galactose
4-epimerase / Galactowaldenase identical to SP|Q42605
[GB:CAA90941] from [Arabidopsis thaliana] (Arch.
Biochem. Biophys. 327 (1), 27-34 (1996))
Length = 351
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 14 RNILVTGGTGFMGKVLVEKLL 34
+NILVTGG GF+G V +LL
Sbjct: 7 QNILVTGGAGFIGTHTVVQLL 27
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.140 0.432
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,219,171
Number of Sequences: 28952
Number of extensions: 438174
Number of successful extensions: 1044
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1003
Number of HSP's gapped (non-prelim): 49
length of query: 432
length of database: 12,070,560
effective HSP length: 83
effective length of query: 349
effective length of database: 9,667,544
effective search space: 3373972856
effective search space used: 3373972856
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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