GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000656-TA|BGIBMGA000656-PA|undefined
         (85 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L12375-1|AAA28550.1| 1269|Drosophila melanogaster furin1-X protein.    26   7.1  
L12370-2|AAA28546.1| 1269|Drosophila melanogaster furin-like pro...    26   7.1  
AY094803-1|AAM11156.1| 1217|Drosophila melanogaster LD24832p pro...    26   7.1  
AE014297-3796|AAF56464.1| 1269|Drosophila melanogaster CG10772-P...    26   7.1  
AE014134-2273|AAF53238.1| 1217|Drosophila melanogaster CG9934-PA...    26   7.1  
AY118529-1|AAM49898.1|  713|Drosophila melanogaster LD24928p pro...    25   9.4  
AE014297-4191|AAF56756.1|  713|Drosophila melanogaster CG5003-PA...    25   9.4  

>L12375-1|AAA28550.1| 1269|Drosophila melanogaster furin1-X protein.
          Length = 1269

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 56  LLLNTQRNQMPLDPIICPQPSGSDEQPP 83
           +   T ++  P DPI  P+PSGS+   P
Sbjct: 786 IFYGTTQSIGPNDPISVPKPSGSEATTP 813


>L12370-2|AAA28546.1| 1269|Drosophila melanogaster furin-like
           protein X protein.
          Length = 1269

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 56  LLLNTQRNQMPLDPIICPQPSGSDEQPP 83
           +   T ++  P DPI  P+PSGS+   P
Sbjct: 786 IFYGTTQSIGPNDPISVPKPSGSEATTP 813


>AY094803-1|AAM11156.1| 1217|Drosophila melanogaster LD24832p
           protein.
          Length = 1217

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 49  QNSPALALLLNTQRNQMPLDPIICPQPSGSDEQPP 83
           QN   L+ LLN   N+     IIC Q +   EQ P
Sbjct: 204 QNEQLLSRLLNATWNEYGSGSIICAQSASFLEQQP 238


>AE014297-3796|AAF56464.1| 1269|Drosophila melanogaster CG10772-PB,
           isoform B protein.
          Length = 1269

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 56  LLLNTQRNQMPLDPIICPQPSGSDEQPP 83
           +   T ++  P DPI  P+PSGS+   P
Sbjct: 786 IFYGTTQSIGPNDPISVPKPSGSEATTP 813


>AE014134-2273|AAF53238.1| 1217|Drosophila melanogaster CG9934-PA
           protein.
          Length = 1217

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 49  QNSPALALLLNTQRNQMPLDPIICPQPSGSDEQPP 83
           QN   L+ LLN   N+     IIC Q +   EQ P
Sbjct: 204 QNEQLLSRLLNATWNEYGSGSIICAQSASFLEQQP 238


>AY118529-1|AAM49898.1|  713|Drosophila melanogaster LD24928p
           protein.
          Length = 713

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 58  LNTQRNQMPLDPIICPQPSGSDEQPPK 84
           L TQ     +  ++ P P   DEQPPK
Sbjct: 677 LETQEEDDTVVVMLQPPPRADDEQPPK 703


>AE014297-4191|AAF56756.1|  713|Drosophila melanogaster CG5003-PA
           protein.
          Length = 713

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 58  LNTQRNQMPLDPIICPQPSGSDEQPPK 84
           L TQ     +  ++ P P   DEQPPK
Sbjct: 677 LETQEEDDTVVVMLQPPPRADDEQPPK 703


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.132    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,395,386
Number of Sequences: 52641
Number of extensions: 87148
Number of successful extensions: 150
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143
Number of HSP's gapped (non-prelim): 7
length of query: 85
length of database: 24,830,863
effective HSP length: 65
effective length of query: 20
effective length of database: 21,409,198
effective search space: 428183960
effective search space used: 428183960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)