Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000656-TA|BGIBMGA000656-PA|undefined
(85 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC103567-1|AAL77192.1| 189|Caenorhabditis elegans Hypothetical ... 28 0.71
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 26 3.8
U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated k... 26 3.8
U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated ... 26 3.8
U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated ... 26 3.8
U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated k... 26 3.8
D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase ... 26 3.8
AL031633-26|CAA21013.2| 465|Caenorhabditis elegans Hypothetical... 26 3.8
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 25 6.6
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 25 6.6
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 25 6.6
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 25 6.6
>AC103567-1|AAL77192.1| 189|Caenorhabditis elegans Hypothetical
protein Y51F10.7 protein.
Length = 189
Score = 28.3 bits (60), Expect = 0.71
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 61 QRNQMPLDPIICPQPSGSDEQ 81
Q N MP+D CP P+G+D+Q
Sbjct: 17 QINAMPIDLADCPFPNGTDKQ 37
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 49 QNSPALALLLNTQRNQMPLDPIICPQPSGSDEQPP 83
QN PA N Q+N+ L I C Q + Q P
Sbjct: 182 QNQPACTCSTNNQQNEQILVSISCCQQQETTTQAP 216
>U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated
kinase CePAK protein.
Length = 572
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 45 YNMRQNSPALALLLNTQRNQMPLDPIICPQPSGSDEQPPKV 85
YN +Q P +N R+ MP P P P E P +
Sbjct: 188 YNSKQGVPPTTFSVNENRSSMP--PSYAPPPVPHGETPADI 226
>U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated
kinase family protein1, isoform c protein.
Length = 523
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 45 YNMRQNSPALALLLNTQRNQMPLDPIICPQPSGSDEQPPKV 85
YN +Q P +N R+ MP P P P E P +
Sbjct: 139 YNSKQGVPPTTFSVNENRSSMP--PSYAPPPVPHGETPADI 177
>U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated
kinase family protein1, isoform a protein.
Length = 572
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 45 YNMRQNSPALALLLNTQRNQMPLDPIICPQPSGSDEQPPKV 85
YN +Q P +N R+ MP P P P E P +
Sbjct: 188 YNSKQGVPPTTFSVNENRSSMP--PSYAPPPVPHGETPADI 226
>U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated
kinase family protein1, isoform b protein.
Length = 569
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 45 YNMRQNSPALALLLNTQRNQMPLDPIICPQPSGSDEQPPKV 85
YN +Q P +N R+ MP P P P E P +
Sbjct: 185 YNSKQGVPPTTFSVNENRSSMP--PSYAPPPVPHGETPADI 223
>D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase
protein.
Length = 569
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 45 YNMRQNSPALALLLNTQRNQMPLDPIICPQPSGSDEQPPKV 85
YN +Q P +N R+ MP P P P E P +
Sbjct: 185 YNSKQGVPPTTFSVNENRSSMP--PSYAPPPVPHGETPADI 223
>AL031633-26|CAA21013.2| 465|Caenorhabditis elegans Hypothetical
protein Y39A1A.9 protein.
Length = 465
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 48 RQNSPALALLLNTQRNQMPLDPIICPQPSGSD 79
R NS + A L NQ+ + PQPSG D
Sbjct: 204 RHNSTSDAEFLQALSNQLAACQVTTPQPSGVD 235
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 25.0 bits (52), Expect = 6.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 46 NMRQNSPALALLLNTQRNQMPLDPIICPQPSGSDEQP 82
N+ + ALA ++N QR P + P+ S S+ QP
Sbjct: 534 NVETSGEALAQVVNRQRAPSIQAPPLPPRLSASEHQP 570
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 25.0 bits (52), Expect = 6.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 46 NMRQNSPALALLLNTQRNQMPLDPIICPQPSGSDEQP 82
N+ + ALA ++N QR P + P+ S S+ QP
Sbjct: 534 NVETSGEALAQVVNRQRAPSIQAPPLPPRLSASEHQP 570
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 25.0 bits (52), Expect = 6.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 46 NMRQNSPALALLLNTQRNQMPLDPIICPQPSGSDEQP 82
N+ + ALA ++N QR P + P+ S S+ QP
Sbjct: 517 NVETSGEALAQVVNRQRAPSIQAPPLPPRLSASEHQP 553
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 25.0 bits (52), Expect = 6.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 46 NMRQNSPALALLLNTQRNQMPLDPIICPQPSGSDEQP 82
N+ + ALA ++N QR P + P+ S S+ QP
Sbjct: 475 NVETSGEALAQVVNRQRAPSIQAPPLPPRLSASEHQP 511
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.132 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,619,071
Number of Sequences: 27539
Number of extensions: 38469
Number of successful extensions: 80
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 73
Number of HSP's gapped (non-prelim): 12
length of query: 85
length of database: 12,573,161
effective HSP length: 64
effective length of query: 21
effective length of database: 10,810,665
effective search space: 227023965
effective search space used: 227023965
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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