Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000654-TA|BGIBMGA000654-PA|undefined
(420 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 32 0.17
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 32 0.17
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 31 0.30
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 29 1.6
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 29 1.6
SPAC6B12.11 |drc1|sld1|DNA replication protein Drc1|Schizosaccha... 28 2.1
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 28 2.1
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 2.1
SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces pom... 28 2.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.7
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 27 4.9
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 27 4.9
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 27 6.5
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 27 6.5
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 8.6
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 31.9 bits (69), Expect = 0.17
Identities = 42/169 (24%), Positives = 61/169 (36%), Gaps = 8/169 (4%)
Query: 240 NANQQFYQNSNAFPNIPPLTNHYSNSDLASLMNHR--TYKDQCNSTDELGAM-AQAMSLG 296
NA+ S A + PL N S N T+ ++T +M
Sbjct: 179 NASNTVSVTSPASSSATPLPNQPSQQQFLVSKNDAFTTFVHSVHNTPMQQSMYVPQQQTS 238
Query: 297 HSENSLYSNSQATTSKDSSPDEFSSDDGIPFIMPLSHNGTLAATGDDGKLRLIVPVSPSE 356
HS + Y N A S P ++S G PF P N + +A+ D + + +P
Sbjct: 239 HSSGASYQNESANPPVQS-PMQYSYSQGQPFSYPQHKNQSFSASPIDPSMSYVYR-APES 296
Query: 357 STSDVAEIHPVESPSTSGHTLKVPGQVELLAPAA--PITRTTSEKVPNR 403
+S A + + T VP Q E P P R TS K+ R
Sbjct: 297 FSSINANVPYGRNEYLRRVTSLVPNQPEYTGPYTRNPELR-TSHKLAER 344
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 31.9 bits (69), Expect = 0.17
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 9/137 (6%)
Query: 238 TFNANQQFYQNSNAFP-NIPPLTNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLG 296
TF ++ FY NS+ P ++P + +++S+ ++ T N++ +
Sbjct: 341 TFTSSPPFYSNSSVIPTSVPSSVSSFTSSN----SSYTTTLTASNTSITYTGTGTGSATF 396
Query: 297 HSENSLYSNSQA-TTSKDSSPDEFSSDDGIPFIMPLSHNGTLAATGDDGKLRLIVPVSPS 355
S YSNS TS SS F+S + + N T+ TG P
Sbjct: 397 TSSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASNTTVTFTGTGTGSATFTSSPPF 456
Query: 356 ESTSDVAEIHPVESPST 372
S S V P +PS+
Sbjct: 457 YSNSSVI---PTSAPSS 470
Score = 31.5 bits (68), Expect = 0.23
Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 238 TFNANQQFYQNSNAFP-NIPPLTNHY--SNSDLASLMNHRTYKDQCNSTDELGAMAQAMS 294
TF ++ FY NS+ P + P + + SNS + + T A A + S
Sbjct: 449 TFTSSPPFYSNSSVIPTSAPSSVSSFTSSNSSYTTTLTASNTTVTFTGTGTGSATATSSS 508
Query: 295 LGHSENSL-----YSNSQATTSKDSSPDEFSSDDGIPFIMPLSHNGTLAATGDDGKLRLI 349
+S +S+ S S + +S SSP SS G + S+ T T ++
Sbjct: 509 PYYSNSSIIVPTTVSTSGSVSSFSSSPSPTSSFSGTSALSSSSNEETTTTT------QVT 562
Query: 350 VPVSPSESTSDVAEIHPVESPSTSGHTLKVPGQV-ELLAPAAPITRT 395
SP E+T+ + P + T+ V E + +A IT T
Sbjct: 563 YTTSPEETTTTMTTTTCSSRPEETISTVSTTSTVSESGSSSASITST 609
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 31.1 bits (67), Expect = 0.30
Identities = 23/81 (28%), Positives = 30/81 (37%)
Query: 252 FPNIPPLTNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQATTS 311
F IP + S+S L+S NH + D D + + S E + A T
Sbjct: 29 FSKIPNVKQEKSDSTLSSSSNHDSNHDTPADVDNSSNVNKNSSSPERELPTSPSHHANTE 88
Query: 312 KDSSPDEFSSDDGIPFIMPLS 332
DSS PF PLS
Sbjct: 89 IDSSSSMLPPPSSDPFSSPLS 109
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 28.7 bits (61), Expect = 1.6
Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 3/173 (1%)
Query: 152 KGSQQQLSTEALINLFAQTKVSQNVENNNMKFSPFCVTPTSELTNGPTSAPCFGTMTNDQ 211
K S++ T + + + + N+++++ + TS+ N F +
Sbjct: 249 KNSKRADDTARMASRMKPSNFNNNIQSSSYGHASQSTKLTSQRDNDHQKDLNFSPYKSIP 308
Query: 212 IQNYLISKFQDMGGFSXXXXXXDQKPTFNANQQFYQNSNAFPNIPPLTNHYSNSDLASL- 270
+ N S ++ GFS D + ++F +NS P ++++ S S L L
Sbjct: 309 LNNRPYSPMSEIVGFSGSTTPLDTYGNRPSGKKFNKNSKFRPPGSTISSYSSASTLRRLP 368
Query: 271 --MNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQATTSKDSSPDEFSS 321
+ + ++ NST G +A+ + S++Q D + S+
Sbjct: 369 RAPGSKVHAERQNSTFNSGISLRALRKEMGNTAPVSSNQLLKDADLVMENLST 421
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 28.7 bits (61), Expect = 1.6
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 262 YSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSENSLY-SNSQATTSKDSSPDEFS 320
+S SD++S + + KD+ + T +L A + + EN++ S+S+ +K+S + S
Sbjct: 67 HSRSDVSSQVQNSPNKDEEHQTADLLASNEGNEKNNEENNVVSSDSKEAITKESGAELES 126
Query: 321 SDDGIPFIMPLSHNGTLAATGDDGKLRLIVPVSPSESTS 359
S+ P S N + T G+ P+ + S
Sbjct: 127 SE-------PASTNSNVGMTTRSGRQSPRTPIGSTTPKS 158
>SPAC6B12.11 |drc1|sld1|DNA replication protein
Drc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 349 IVPVSPSESTSDVAEIHPVESPSTSGHTLKVPGQVELLAPAAPITRTTSE 398
++P +PS++ VA+ P + S + L+V LL AP ++ SE
Sbjct: 150 MIPTTPSKNPEPVAQHTPTVLETPSSYRLQVYTSPNLLRVNAPCRKSLSE 199
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 141 INEATQSQISPKGSQQQLSTEALINLFAQTKVSQNVENNN 180
++ A S + S + L + +N F Q V+ N NNN
Sbjct: 346 VSNANSSNSNDGSSSKSLDVGSFVNAFKQLNVNDNSSNNN 385
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 351 PVSPSESTSDVAEIHPVESPSTSGHTLKVPGQVELLAPAAPITRTTSEKVPNRSEMMTAL 410
P+S S I+P PS + T K+P L ++ + TT+ V N ++ +
Sbjct: 387 PISGSSFPDGFKPINPTSFPSLTSSTKKIPSTT--LPTSSKMITTTTPSVSNNTQSSFLI 444
Query: 411 RSQWT 415
S +T
Sbjct: 445 ISTFT 449
>SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 27.9 bits (59), Expect = 2.8
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 252 FPNIPPLTNHYSNSDLASLMNHRTYKDQC---NSTDELGAMAQAMSLGHSENSLYSNSQA 308
F +I P + ++ S++ + T K C NST +G + +A+ + EN ++S
Sbjct: 88 FVSIKPNSRNFQLSNILEPVI--TAKHTCIVYNSTGAIG-VEEALQRQYPENPIFSLITH 144
Query: 309 TTSKDSSPDEFSSDDGIPFIM 329
T S DEF D PF +
Sbjct: 145 TPVSQRSVDEFFFGDCAPFYL 165
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 255 IPPLTNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQATTSKDS 314
IPP T +++ S L + N K+ ++ GA Q+ +NS Y N TT KD+
Sbjct: 904 IPPSTRNFTES-LNQVKN--LIKNDTSNRKPFGAENQSKL---KKNSFYDNPSETTEKDA 957
Query: 315 SPDEFSSDDGIPFI 328
+ + D ++
Sbjct: 958 TLYRHNDSDASAYV 971
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 301 SLYSNSQATTSKDSSPDE-FSSDDGIPFIMPLS 332
SL++ S ATTS +S D+ FS DD I + LS
Sbjct: 21 SLFTQSIATTSASTSVDDGFSFDDSISRLNSLS 53
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 27.1 bits (57), Expect = 4.9
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 234 DQKPTFNANQQFYQNSNAFPNIP-PL-TNHYSNSDLASLMNHRTYKDQ 279
D +A +QNSNAF N P PL +H S+ L S+ Y+DQ
Sbjct: 229 DGSTAIHAGPIQHQNSNAFSNYPYPLDASHLSSQQLLSM-----YRDQ 271
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 353 SPSESTSDVAEIHPVESPSTSGHTLKVPGQVELLAPAAPITRTTS 397
+PS+ D + PV+S ST+ P + P T TT+
Sbjct: 827 NPSQYGCDNGALGPVQSSSTTSSITPTPTTTSSITPTPTTTSTTT 871
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 174 QNVENNNMKFSPFCVTPTSELTNGPTSAPCFG 205
+NV NN + PT T TSAP FG
Sbjct: 3 ENVNINNKRAGKMSAAPTPHNTPSGTSAPNFG 34
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.2 bits (55), Expect = 8.6
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 337 LAATGDDGKLRLIVPVSPSESTSDVAEIHPVESPSTSGHTLKVPGQV 383
L AT +DG ++LI S D+ I ++ PS H L GQ+
Sbjct: 750 LVAT-EDGVVQLIKQPGASLDAGDILGILTLDDPSRVTHALPFDGQL 795
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.125 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,705,022
Number of Sequences: 5004
Number of extensions: 67737
Number of successful extensions: 170
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 161
Number of HSP's gapped (non-prelim): 19
length of query: 420
length of database: 2,362,478
effective HSP length: 75
effective length of query: 345
effective length of database: 1,987,178
effective search space: 685576410
effective search space used: 685576410
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)
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