Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000654-TA|BGIBMGA000654-PA|undefined
(420 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43750| Best HMM Match : NAP (HMM E-Value=3.3) 35 0.14
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.14
SB_34344| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.57
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.0
SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13) 32 1.0
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 32 1.0
SB_10994| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_53958| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_15911| Best HMM Match : Sec7 (HMM E-Value=0) 31 1.3
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06) 31 1.8
SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0) 31 1.8
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 31 1.8
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 31 2.3
SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5) 29 5.3
SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_15781| Best HMM Match : TP2 (HMM E-Value=1.7) 29 9.3
>SB_43750| Best HMM Match : NAP (HMM E-Value=3.3)
Length = 514
Score = 34.7 bits (76), Expect = 0.14
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 261 HYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSENS-LYSNSQATTSKD--SSPD 317
HY SD S + + DQ +S+D+ + Q S + +S S+S T+S D SS D
Sbjct: 89 HYLRSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSD 148
Query: 318 EFSSDD 323
+ SS D
Sbjct: 149 QTSSSD 154
Score = 34.7 bits (76), Expect = 0.14
Identities = 36/182 (19%), Positives = 75/182 (41%), Gaps = 6/182 (3%)
Query: 154 SQQQLSTEALINLFAQTKVSQNVENNNMKFSPFCVTPTSELTNGPTSAPCFGTMTNDQIQ 213
S Q S+ + QT S +++ S + + + ++ ++ T ++DQ
Sbjct: 104 SSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTS 163
Query: 214 NYLISKFQDMGGFSXXXXXXDQKPTFNANQQFYQNSNAFPNIPPLTNHYSNSDLASLMNH 273
+ + D S DQ T +++Q + + + ++ S+SD S +
Sbjct: 164 SSDQTSSSDQTSSSDQTSSSDQ--TSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQ 221
Query: 274 RTYKDQCNSTDELGAMAQAMSLGHSENS-LYSNSQATTSKDSSPDEFSSD---DGIPFIM 329
+ DQ +S+D+ + Q S + +S S+S T+S D + D + IP ++
Sbjct: 222 TSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSGQKDLTMNSIPVLL 281
Query: 330 PL 331
L
Sbjct: 282 VL 283
Score = 32.3 bits (70), Expect = 0.76
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 11/117 (9%)
Query: 210 DQIQNYLISKFQDMGGFSXXXXXXDQKPTFNANQQFYQNSNAFPNIPPLTNHYSNSDLAS 269
+++Q YL D S DQ + + Q S++ + S+SD S
Sbjct: 82 NKLQTYLHYLRSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSS--------DQTSSSDQTS 133
Query: 270 LMNHRTYKDQCNSTDELGAMAQAMSLGHSENS-LYSNSQATTSKD--SSPDEFSSDD 323
+ + DQ +S+D+ + Q S + +S S+S T+S D SS D+ SS D
Sbjct: 134 SSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSD 190
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 34.7 bits (76), Expect = 0.14
Identities = 29/138 (21%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 240 NANQQFYQNSNAFPNIPPLTNHYSNSDLASLMNHRTYKD-QCNSTDELGAMAQAMSLGHS 298
N+N NSN+ N +N SNS+ S N + + NS + + + S +S
Sbjct: 427 NSNSNSNSNSNSNSNSKSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSSSSSSSNSNS 486
Query: 299 ENSLYSNSQATTSKDSSPDEFSSDDGIPFIMPLSHNGTLAATGDDGKLRLIVPVSPSEST 358
++ SNS + ++ +S+ + S+ D S++ + + + + V V+ + +
Sbjct: 487 NSNSNSNSNSNSNSNSNSNSNSNSDSNNNSNSNSNSNSNSNSNSNSNSNSTVTVTVTATA 546
Query: 359 SDVAEIHPVESPSTSGHT 376
+ A + S S+S ++
Sbjct: 547 TATATVTVHNSSSSSSNS 564
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 240 NANQQFYQNSNAFPNIPPLTNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSE 299
N+N NSN+ N +N SNS+ S N + NS + + + S S
Sbjct: 421 NSNSNSNSNSNSNSNSNSNSNSKSNSNSNSNSNSNS-NSNSNSNSNSNSNSNSNSNSSSS 479
Query: 300 NSLYSNSQATTSKDSSPDEFSSDD 323
+S SNS + ++ +S+ + S+ +
Sbjct: 480 SSSNSNSNSNSNSNSNSNSNSNSN 503
Score = 29.1 bits (62), Expect = 7.1
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 240 NANQQFYQNSNAFPNIPPLTNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSE 299
N+N NSN+ N +N SNS+ S N + T A A A H+
Sbjct: 499 NSNSNSNSNSNSDSNNNSNSNSNSNSNSNSNSNSNS-NSTVTVTVTATATATATVTVHNS 557
Query: 300 NSLYSNSQATTSKDSSPDEFSSDD 323
+S SNS + ++ +S+ + S+ +
Sbjct: 558 SSSSSNSNSNSNSNSNSNSNSNSN 581
Score = 28.7 bits (61), Expect = 9.3
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 227 SXXXXXXDQKPTFNANQQFYQNSNAFPNIPPLTNHYSNSDL-ASLMNHRTYKDQCNSTDE 285
S + K N+N NSN+ N +N SNS+ +S + NS
Sbjct: 434 SNSNSNSNSKSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSSSSSSSNSNSNSNSNSN 493
Query: 286 LGAMAQAMSLGHSENSLYSNSQATTSKDSSPDEFSSDD 323
+ + + S +S ++ SN+ + ++ +S+ + S+ +
Sbjct: 494 SNSNSNSNSNSNSNSNSDSNNNSNSNSNSNSNSNSNSN 531
>SB_34344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 32.7 bits (71), Expect = 0.57
Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 13/162 (8%)
Query: 256 PPLTNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQATTSKDSS 315
PP + + SL N+ ++ C + + G Q + + Q S DS
Sbjct: 663 PPRHESFLPLESKSLTNYNASRESCGAYRDSGVDVQENENSPTHKPYRNGPQDGPSPDSF 722
Query: 316 PDEFSSDDGIPFIMPLSHNGTLAATGDDGKLRLIVPVSPSESTSDVAEIHPVESPSTSGH 375
P+ + + I ++P NG + D ++ + PS P PS+S H
Sbjct: 723 PNGQAGNRDITGLVP---NGPVTTARCDSSPDILESIKPS----------PPVQPSSSVH 769
Query: 376 TLKVPGQVELLAPAAPITRTTSEKVPNRSEMMTALRSQWTRH 417
+ K ++ P T + K R+++ L ++ H
Sbjct: 770 SAKRSVPSYVINITGPFTERVANKGQGRTKLWHRLYAETNHH 811
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 31.9 bits (69), Expect = 1.0
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 298 SENSLYSNSQATTSKDSSPDEFSS--DDGIPFIMPLSHNGTLAATGD-DGKLRLIVPVSP 354
+ +S+ + + T+ +++P +S DG P+S NGT A + DG R P+S
Sbjct: 946 TRSSIETTPETTSPSETTPTTATSMSTDGTT-AAPMSTNGTTTAPRNTDG--RTAAPMST 1002
Query: 355 SESTSDVAEIHPVESPSTSGHTLKVP 380
E+TS H +P T+ T P
Sbjct: 1003 DETTSASMTKHATAAPITTNGTTAEP 1028
>SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13)
Length = 1217
Score = 31.9 bits (69), Expect = 1.0
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 238 TFNANQQFYQNSNAFPNIPPLTNHYSNSDLASLMNHRTYKDQCNSTDELG-AMAQAMSLG 296
+F+A F + NIPP++ SN L + + +++D +++ G + A +L
Sbjct: 943 SFSAESLFTTGDDFLHNIPPISTSLSNQSLNNSFSIPSFQDTVDTSSHQGTSNFSAEALI 1002
Query: 297 HSENSLYSNSQATTSKDSSPDEFS 320
S+ L S S A S S ++ S
Sbjct: 1003 GSDLMLSSESSANQSSCSQSNQSS 1026
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 31.9 bits (69), Expect = 1.0
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 14/129 (10%)
Query: 304 SNSQATTSKDSSPDEFSSDDGIPFIMPLSHNGTLAATGD-------DGKLRLIVPVSPSE 356
S+ Q T + +S S +P I + +L +TG D +L I P SPS
Sbjct: 436 SDIQKTAIRSTSVTVQYSTSSVPIIAITTSYDSLKSTGVFKPTTAIDTQLSTITPTSPSS 495
Query: 357 STS------DVAEIHPVESPSTSGHTLKVPGQVELLAPAAPITRTTSEKVPNRSEMMTAL 410
TS D A P SPS+ + V G + + I TTS P + +T L
Sbjct: 496 ITSSDVGSTDTATSTPTSSPSSPITSSDVGGS-DTTSSLIIIDTTTSGITPTSTISVTTL 554
Query: 411 RSQWTRHTT 419
+ T TT
Sbjct: 555 TTTRTHTTT 563
>SB_10994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 349 IVPVSPSESTSDVAEIHPVESPSTSGHTLKVPGQVELLAPAAPITRTTSEKVPNRSEMMT 408
+ PV PS + +++ PV +S T P + LAP P R+ VP +
Sbjct: 79 LTPVPPSRRSDLISDRTPVPPSRSSDLTPVPPSRRSDLAPVPPSRRSDLTPVP--LSRRS 136
Query: 409 ALRSQWT 415
LRS WT
Sbjct: 137 DLRSDWT 143
>SB_53958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 271 MNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQATTSKDSSPDEFSS 321
MN +D+ +++ G ++ S G S+ SL SNS A+ +P++F S
Sbjct: 20 MNEPDTEDKDSTSGSSGLGSELKSFGGSQGSLNSNSAASGITPDNPEQFES 70
>SB_15911| Best HMM Match : Sec7 (HMM E-Value=0)
Length = 1220
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 271 MNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQATTSKDSSPDEFSS 321
MN +D+ +++ G ++ S G S+ SL SNS A+ +P++F S
Sbjct: 763 MNEPDTEDKDSTSGSSGLGSELKSFGGSQGSLNSNSAASGITPDNPEQFES 813
>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
Length = 2009
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 327 FIMPLSHNGTLAATGDDGKLRLIVPVSPSESTSDVAEIHPVESPSTSGHTLKVPGQVEL 385
++ PL N T+ A+ D +R +PV E A PV + S HT+ QVEL
Sbjct: 1597 YLEPLEGNITIIASADGESIRFYIPVE-VEFCGPPAIYLPVANRRDSSHTVTRGDQVEL 1654
>SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 689
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 239 FNANQQFYQNSNAFPNIPPLTNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHS 298
FN+N NSN+ N N SNS+ S N+ NS + + + S +S
Sbjct: 354 FNSNSNSNSNSNSTSNSNSNNNSNSNSNNNS-NNNNNNNSNSNSNSNSNSNSNSNSNSNS 412
Query: 299 ENSLYSNSQATTS 311
++ SNS +T +
Sbjct: 413 NSNSNSNSNSTVT 425
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 31.1 bits (67), Expect = 1.8
Identities = 46/206 (22%), Positives = 77/206 (37%), Gaps = 13/206 (6%)
Query: 173 SQNVENNNMKFSPFCVTPTSELTNGPTSAPCFGTMTNDQIQNYLISKFQDMGGFSXXXXX 232
+ N +N+N S +S+ +N S T N +N
Sbjct: 82 NSNTDNSNSDNSS-SDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNS 140
Query: 233 XDQKP-TFNANQQFYQNSNAFPNIPPLTNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQ 291
D KP N N NSN N S++ + N ++TD G+
Sbjct: 141 DDSKPDNSNTNNSNSDNSNT-------DNSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNS 193
Query: 292 AMSLGHSENSLYSNSQATTSKDSSPDEFSSDDGIPFIMPLSHNGTLAATGDDGKLRLIVP 351
+ +S+NS NS TS +S+ D +SD+ ++ T +T D+ K P
Sbjct: 194 SSGNFNSDNSTSDNS---TSDNSNSDNSTSDNSTSDNSNSDNSYTDNSTSDNSKKDNSNP 250
Query: 352 -VSPSESTSDVAEIHPVESPSTSGHT 376
S ++++S +P S S + +T
Sbjct: 251 NNSNTDNSSSADNSNPDNSNSDNSNT 276
Score = 29.9 bits (64), Expect = 4.0
Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 9/184 (4%)
Query: 140 GINEATQSQISPKGSQQQLSTEALINLFAQTKVSQNVENNNMKFSPFCVTPTSELTNGPT 199
G + ++ + S ST N T + +N+N S + TS+ +
Sbjct: 189 GSDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSDNS-YTDNSTSDNSKKDN 247
Query: 200 SAPCFGTMTNDQIQNYLISKFQDMGGFSXXXXXXDQKPTFNANQQFYQNSNAFPNIPPLT 259
S P N + + + D + N+N N+ N
Sbjct: 248 SNPNNSNTDNSSSADNSNPDNSNSDNSNTDNSNSDNSSSDNSNSDNSNTDNSTSN----N 303
Query: 260 NHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQATTSKDSSPDEF 319
++ NS + ++ + +D NS D + ++ NS SNS +TS +S+PD
Sbjct: 304 SNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNT----NNSNSDNSNSDNSTSDNSNPDNL 359
Query: 320 SSDD 323
+SD+
Sbjct: 360 TSDN 363
Score = 29.5 bits (63), Expect = 5.3
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 240 NANQQFYQNSNAFPNIPPLTN-HYSNSDLASLMNH---RTYKDQCNS----TDELGAMAQ 291
N+N NSN+ + P +N + SNSD ++ N + D S TD G+
Sbjct: 315 NSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNSDNSTSDNSNPDNLTSDNPNTDNSGSDNS 374
Query: 292 AMSLGHSENSLY--SNSQATTSKDSSPDEFSSDD 323
+ +S+NS SNS +TS +SS D +SD+
Sbjct: 375 SSGNFNSDNSTSDNSNSDNSTSDNSSSDNSNSDN 408
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 272 NHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQATTSKDSSPDEFSSDDG 324
N T ++ + + E+ + +++ S SE + ++ DSS DE +DDG
Sbjct: 376 NQETSDEESDGSSEVSSESESGSDAESEEGEGEGEEVSSGSDSSTDEEGTDDG 428
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 278 DQCNSTDELGAMAQAMSLGHSENSLYSNS-----QATTSKDSSPDEFSSDDGIPFIMPLS 332
+ CN T E G+ + ++ + + S++ + T ++D++ S +G +
Sbjct: 129 NSCNDTSEYGSKDRHANISSVQENPGSHTNTVQGEVTPAQDAAGGSSESVEGNRDTQKGN 188
Query: 333 HNGTLAATGDDGKLRLI--VPVSPSESTSDVAEIHPVESPSTSGHTLKV 379
NGT+++T + P+S + TS+ IH E S G++ V
Sbjct: 189 SNGTMSSTSTQAFPAALNETPLSGAVQTSENTSIHDKEMTSEEGNSTSV 237
>SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 30.3 bits (65), Expect = 3.1
Identities = 27/126 (21%), Positives = 50/126 (39%)
Query: 248 NSNAFPNIPPLTNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQ 307
NSN N ++ SNS +S + + +S++ + + + S S +S S+S
Sbjct: 54 NSNNSSNSSSSSSSSSNSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSS 113
Query: 308 ATTSKDSSPDEFSSDDGIPFIMPLSHNGTLAATGDDGKLRLIVPVSPSESTSDVAEIHPV 367
+++S SS SS S + + +++ S S S S +
Sbjct: 114 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSS 173
Query: 368 ESPSTS 373
S S+S
Sbjct: 174 SSSSSS 179
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/89 (22%), Positives = 38/89 (42%)
Query: 227 SXXXXXXDQKPTFNANQQFYQNSNAFPNIPPLTNHYSNSDLASLMNHRTYKDQCNSTDEL 286
S + N+N NS++ N +N S+S S N + + +S++
Sbjct: 143 SSSSSSSGSSSSSNSNSNSNSNSSSSSNSSSNSNSNSSSSSNSSSNSNSSSNSSSSSNSS 202
Query: 287 GAMAQAMSLGHSENSLYSNSQATTSKDSS 315
+++ S + NS S+S + +S SS
Sbjct: 203 SNSSRSSSSSSNSNSNSSSSSSRSSSSSS 231
>SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 356 ESTSDVAEIHPVESPSTSGHTLKVPGQVELLAPAAPITRTTSEKVPNRSEM 406
ES SD+ ++ T G TL+ P V PA+ I+R +R E+
Sbjct: 1149 ESNSDIRKLFGSNYSKTRGLTLETPHSVHARTPASGISRVPESAFGSRYEI 1199
>SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 29.5 bits (63), Expect = 5.3
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 347 RLIVPVSPSESTSDVAEIHPVESPSTSGHTLKVPGQVELLAPAAPITRTTSEKVPNRSEM 406
RL P +T + +P + P+T H+ ++P + +L A T +T+ ++ +
Sbjct: 238 RLDEPTRMPSTTKATTKRYPTKRPTTKRHSTRLPTRKMMLTRALSTTPSTTPELRRCGGV 297
Query: 407 MTA 409
+TA
Sbjct: 298 LTA 300
>SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5)
Length = 1308
Score = 29.5 bits (63), Expect = 5.3
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 234 DQKPTFNANQQFYQNS-NAFPNIPPLTNHYSNSDLASLMNHR--TYKDQCNSTDELGAMA 290
DQ T +QQ + S + P IPP TN S+S +S H + +D+ ST G
Sbjct: 443 DQDITHFTDQQASRTSISPIPTIPPATNISSSSADSSFQTHAVGSLEDEVFSTRTYGMGR 502
Query: 291 QAM 293
+AM
Sbjct: 503 EAM 505
>SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 751
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 248 NSNAFPNIPPLTNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQ 307
+S++ N+ P ++ S +AS NHR + +++ + +A M+ + N L S++
Sbjct: 481 DSSSTMNVSPNSDSSSRQPVASDPNHRRMSGEESTSYLIRTIASHMNQERNTN-LKSSTM 539
Query: 308 ATTSKDSSPDEFSSDDGI 325
T +S P +SD I
Sbjct: 540 EATLLESQPTRRNSDHAI 557
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 29.1 bits (62), Expect = 7.1
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 337 LAATGDDGKLRLIVPVSPSESTSDVAEIHPVESPSTSGHTLKVPGQVELLAPAAPITRTT 396
L A DD KL PS TSD + + PS + VP V+ + P +R +
Sbjct: 933 LEAAKDDPKLL------PSFMTSDAQKTEESDQPSKDSESKTVPDTVKAESMPVPASRQS 986
Query: 397 SEKVPNRSEMM 407
+P+ S M
Sbjct: 987 KAPIPHPSPPM 997
>SB_15781| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 494
Score = 28.7 bits (61), Expect = 9.3
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 142 NEATQSQISPKGSQQQLSTEALINLFAQTKVSQNVENNNMKFSPFCVTPTSELTNGPT 199
NE T+SQ G ++++ EA ++ + + + E+ + SPF + T T+ PT
Sbjct: 107 NEDTKSQERKVGKERKME-EAHFSISPRIRYTSAPESTKLGESPFSLAKTPRKTSAPT 163
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.125 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,260,369
Number of Sequences: 59808
Number of extensions: 467887
Number of successful extensions: 1050
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 963
Number of HSP's gapped (non-prelim): 54
length of query: 420
length of database: 16,821,457
effective HSP length: 84
effective length of query: 336
effective length of database: 11,797,585
effective search space: 3963988560
effective search space used: 3963988560
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -