GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000654-TA|BGIBMGA000654-PA|undefined
         (420 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein...    25   2.9  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           24   6.8  

>AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein
           protein.
          Length = 178

 Score = 25.4 bits (53), Expect = 2.9
 Identities = 16/66 (24%), Positives = 27/66 (40%)

Query: 259 TNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQATTSKDSSPDE 318
           T   + +  A+     +  D   +T E     +A +   S+NS  + + ATT+  S    
Sbjct: 81  TTSEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSSSDNSTTTEAAATTTAASETTA 140

Query: 319 FSSDDG 324
            SS  G
Sbjct: 141 DSSSTG 146


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 24.2 bits (50), Expect = 6.8
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 225 GFSXXXXXXDQKPTFNANQQFYQNSNAFPNIPPLTNHYSNSDLASLMNHRTYKDQCNSTD 284
           G S      D+ P  +A    Y   +A P+  P  +HY   +  S +N  +     NS+ 
Sbjct: 51  GHSGSSSLYDRVPREHATSSPY---HAPPS--PANSHYEPMECHSAVNSSS-----NSST 100

Query: 285 ELGAMAQAMSLGHSENSLYSNSQATTSKDSSPD 317
                 Q  S   S +S  S S +++S  SSPD
Sbjct: 101 GYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPD 133


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.125    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,630
Number of Sequences: 2123
Number of extensions: 13773
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 2
length of query: 420
length of database: 516,269
effective HSP length: 66
effective length of query: 354
effective length of database: 376,151
effective search space: 133157454
effective search space used: 133157454
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 49 (23.8 bits)