Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000654-TA|BGIBMGA000654-PA|undefined
(420 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 33 0.38
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 33 0.50
Z19153-4|CAA79548.1| 525|Caenorhabditis elegans Hypothetical pr... 31 1.5
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 30 2.7
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 30 2.7
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 30 2.7
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 29 6.2
U40414-4|AAA81407.3| 529|Caenorhabditis elegans Hypothetical pr... 29 6.2
U00063-2|AAK18961.1| 329|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 29 6.2
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 29 6.2
>Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 33.1 bits (72), Expect = 0.38
Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 2/149 (1%)
Query: 263 SNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQATTSKDSSPDEFSSD 322
S S + + M+ T ++T E + + S +S + Q++++ SSP +
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLS 358
Query: 323 DGIPFIMPLSHNGTLAATGDDGKLRLIVPVSPSES-TSDVAEIHPVESPSTSGHTLKVPG 381
IP TL++ D+ + + S + T+ + E PSTS T +V
Sbjct: 359 TSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTS 418
Query: 382 QVELLAPAAPITR-TTSEKVPNRSEMMTA 409
+ P T TTS + +E T+
Sbjct: 419 TSSTVTTTEPTTTLTTSTASTSTTEPSTS 447
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 33.1 bits (72), Expect = 0.38
Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 2/149 (1%)
Query: 263 SNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLGHSENSLYSNSQATTSKDSSPDEFSSD 322
S S + + M+ T ++T E + + S +S + Q++++ SSP +
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLS 358
Query: 323 DGIPFIMPLSHNGTLAATGDDGKLRLIVPVSPSES-TSDVAEIHPVESPSTSGHTLKVPG 381
IP TL++ D+ + + S + T+ + E PSTS T +V
Sbjct: 359 TSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTS 418
Query: 382 QVELLAPAAPITR-TTSEKVPNRSEMMTA 409
+ P T TTS + +E T+
Sbjct: 419 TSSTVTTTEPTTTLTTSTASTSTTEPSTS 447
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 32.7 bits (71), Expect = 0.50
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 5/173 (2%)
Query: 248 NSNAFPNIPPLTNHYSNSDLASLMNHRTYKDQCNSTDELGAMAQAMSLG-HSENSLYSNS 306
N+N F + N N D ++ N YK+ + + ++ Q++ G ++ +SLY
Sbjct: 203 NTNLFAISTGINNMVWNVDYSN-PNSDAYKNAVQNISD--SLTQSLISGLNTASSLYRIL 259
Query: 307 QATTSKDSSPDEFSSDDGIPFIMPLSHNGTLAATGDDGKLRLIVPVSPSESTSDVAEIHP 366
A S + + G ++ NG +++T D G + V+ S TSD +
Sbjct: 260 AAMPSNNIQVQISALRQGSDNMVVAIGNGAISSTSDLGTMPTDQNVN-SVITSDNSTYSD 318
Query: 367 VESPSTSGHTLKVPGQVELLAPAAPITRTTSEKVPNRSEMMTALRSQWTRHTT 419
V + + + + + + AAP+ TT+ P + ++T T TT
Sbjct: 319 VHTAPQACNKNIIQTDCPVCSTAAPVVCTTASSAPASTAVVTTTMPVTTVQTT 371
>Z19153-4|CAA79548.1| 525|Caenorhabditis elegans Hypothetical
protein C38C10.4 protein.
Length = 525
Score = 31.1 bits (67), Expect = 1.5
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 292 AMSLGHSENSLYSNSQATTSKDSSPDEFSSDDGI-PFIMPLSH-----NGTLAATG--DD 343
AM+ SE + ++ A + DSSPD SS+D I F++ L H + G +D
Sbjct: 352 AMNQERSETA--TDQDACLAIDSSPDPTSSNDMINKFVVKLEHATNVETWEMIVNGIIED 409
Query: 344 GKLRLIVPVSPSESTSDVAEIHPVESPSTSGHTLKVPGQVELLAPAAPITRTTSEKVPNR 403
K + + +E D+ ++ + S S+ + P P++ + S+K
Sbjct: 410 QKKPVAIEKKENEEPVDMMDL--IFSMSSRMDDQRTELSAARFIPPRPVS-SASKKTTKS 466
Query: 404 SEMMTALRSQWTR 416
++ LR+ WT+
Sbjct: 467 HRILPGLRANWTK 479
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 306 SQATTSKDSSPDEFSSDDGIPFIMPLSHNGTLAATGDDGKLRLIVPVSPSESTSDVAEIH 365
S +TT+ S ++ P +P ++A G G + +VPVS + ++ V+
Sbjct: 2181 STSTTNTPSPTNQSPVTQAPPVTLPPP---SVATAGPTGPILTVVPVSSAPTSGAVSSTT 2237
Query: 366 PVESPSTSGHTLKVPGQVELLAPAAPI 392
SP+ P V P PI
Sbjct: 2238 NTPSPTNQSPVTLPPPSVATAGPTGPI 2264
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 93 THQLLVHNKELLEHISALVAHLQERE 118
THQLL N++LLE + LV+ LQ E
Sbjct: 475 THQLLSANRDLLEQVQNLVSRLQMLE 500
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 93 THQLLVHNKELLEHISALVAHLQERE 118
THQLL N++LLE + LV+ LQ E
Sbjct: 381 THQLLSANRDLLEQVQNLVSRLQMLE 406
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 93 THQLLVHNKELLEHISALVAHLQERE 118
THQLL N++LLE + LV+ LQ E
Sbjct: 475 THQLLSANRDLLEQVQNLVSRLQMLE 500
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 30.3 bits (65), Expect = 2.7
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 197 GPTSAPCFGTMTNDQIQNYLISKFQDMGGFSXXXXXXDQKPTFNANQQFYQNSNAFPNIP 256
GPT P + +++ +S+ + FS + PT + N+ N + NIP
Sbjct: 419 GPTK-PLTLRLGHNEFYISNMSEQDQLNQFSSLEDHHHETPTSSGNE--VSNKDQSVNIP 475
Query: 257 PLTNHYSNSDLASLMNHRTYKD 278
P+ + +S + L+NH + D
Sbjct: 476 PVVDEIRSSRMKRLVNHTSQLD 497
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 93 THQLLVHNKELLEHISALVAHLQERE 118
THQLL N++LLE + LV+ LQ E
Sbjct: 381 THQLLSANRDLLEQVQNLVSRLQMLE 406
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 329 MPLSHNGTLAATGDDGKLRLIVPVSPSESTSDVAEIHP-VESPSTSGHTLKVPGQVELLA 387
MPL + D G + S S S D+A ++P + SPS + L+ P V+
Sbjct: 1649 MPLIQRPVIEVPADIGSKKTTPKTSVSSSEGDIARMYPSIPSPSLTLEPLR-PSPVQPPT 1707
Query: 388 PAAPIT 393
P +T
Sbjct: 1708 PLGDLT 1713
>U40414-4|AAA81407.3| 529|Caenorhabditis elegans Hypothetical
protein F53B3.3 protein.
Length = 529
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 166 LFAQTKVSQNVENNNMKFSPFCVTPTSELTNGPTSAPCFGTMTNDQ 211
LF Q V +V N M SP TS +N P SAP + T N +
Sbjct: 374 LFPQQPVVSSVYNKKM-MSPEPREVTSSTSNRPVSAPLYATAGNHE 418
>U00063-2|AAK18961.1| 329|Caenorhabditis elegans Hypothetical
protein F56C9.6 protein.
Length = 329
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 246 YQNSNAFPNIPPLTNHYSNSDLASLMN-HRT---YKDQCNSTD 284
++N +FP+ PPLT+ +S+S + N H+T Y+ NS D
Sbjct: 133 FENGVSFPSRPPLTSEHSSSGDSYFNNSHKTTPNYRRFANSND 175
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 326 PFIMPLSHNGTLAATGDDGKLRLIVPVSPSESTSDVAEIHPVESPSTSGHTLKVP 380
P ++ + G L D K+ + V PS+ ++ E+ S T+ TL++P
Sbjct: 671 PCLLLTNQEGRLIKVAFDAKINTFIAVKPSQVLEEIVEVQ--NSGMTTKKTLEIP 723
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 326 PFIMPLSHNGTLAATGDDGKLRLIVPVSPSESTSDVAEIHPVESPSTSGHTLKVP 380
P ++ + G L D K+ + V PS+ ++ E+ S T+ TL++P
Sbjct: 671 PCLLLTNQEGRLIKVAFDAKINTFIAVKPSQVLEEIVEVQ--NSGMTTKKTLEIP 723
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.310 0.125 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,185,600
Number of Sequences: 27539
Number of extensions: 368127
Number of successful extensions: 987
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 982
Number of HSP's gapped (non-prelim): 15
length of query: 420
length of database: 12,573,161
effective HSP length: 83
effective length of query: 337
effective length of database: 10,287,424
effective search space: 3466861888
effective search space used: 3466861888
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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