Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000653-TA|BGIBMGA000653-PA|undefined
(145 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0588 - 26412487-26413887 31 0.48
01_01_0051 + 389051-389623 31 0.48
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 29 1.1
08_02_1118 - 24419167-24420130,24420456-24420463 29 1.5
04_03_0111 - 11361954-11363510 29 1.5
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 29 1.9
01_03_0259 - 14312197-14312259,14312384-14312456,14312651-143127... 29 1.9
12_02_0320 - 17504511-17505016,17505757-17506147 28 2.6
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 28 2.6
09_04_0032 - 13953323-13955269 28 3.4
08_02_1068 - 24076662-24077231 28 3.4
08_01_0474 - 4173245-4174195 28 3.4
02_03_0212 - 16460665-16460766,16460971-16461298,16461379-164615... 28 3.4
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 28 3.4
11_06_0021 + 19314211-19314311,19315202-19315307,19317135-193174... 27 4.5
10_01_0226 - 2401252-2401277,2403491-2403537,2404381-2405504 27 4.5
06_01_1050 + 8262033-8262165,8262262-8262391,8262486-8263026 27 4.5
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128... 27 4.5
03_05_0324 - 23121401-23121465,23121507-23122059 27 4.5
02_05_0554 + 29929860-29929959,29932944-29934220 27 4.5
05_03_0458 + 14280953-14281866,14281964-14282912 27 5.9
04_04_1359 - 32886181-32886789 27 5.9
04_03_0241 - 13243938-13244453,13244538-13246334 27 5.9
01_01_1142 - 9057212-9057541,9058650-9058754,9058826-9058919,905... 27 5.9
08_02_0823 + 21557111-21557292,21557391-21557473,21557722-215578... 27 7.8
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 27 7.8
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 27 7.8
04_03_0771 + 19434460-19434987 27 7.8
02_02_0628 + 12365109-12365150,12366315-12366411,12366489-123665... 27 7.8
>04_04_0588 - 26412487-26413887
Length = 466
Score = 30.7 bits (66), Expect = 0.48
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 2 RIVRTVGQAFEVCHKMQNNSPEQPAPSTSSAVDEPVASCSDAPVSKEGPS 51
+I R+ + + +S P+P +SSA D PV S +P S PS
Sbjct: 51 KIGRSPDRLLRSASSLSTSSSAPPSPRSSSASDAPVRVISSSPSSPSPPS 100
>01_01_0051 + 389051-389623
Length = 190
Score = 30.7 bits (66), Expect = 0.48
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 19 NNSPEQPAPSTSSAVDEPVAS------CSDAPVSKEGPSECESGAASTSXXXXXXXXXXX 72
NN+ AP+ SS D +S S S S ES ++S+S
Sbjct: 75 NNATPPEAPAASSLKDRQRSSHGTDTSSSSESSSSSSSSSSESSSSSSSSSSESSSSSSD 134
Query: 73 XXXPTRPKTLDLLPPPP-RKEGKRSP 97
R + + PPP +KE +RSP
Sbjct: 135 DDLARRRQQRNPSPPPQYKKEARRSP 160
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
Query: 21 SPEQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTSXXXXXXXXXXXXXXPTRPK 80
S P+PS+ ++ P CS +P + P S + T+ P P
Sbjct: 128 SDTPPSPSSDTSPSTPGGGCSSSPTPCDAPPSPSSDTSPTTPGGGGGYSPTPSDTPPSPS 187
Query: 81 TLDLLPPPPRKEGKRSP 97
+ D P P G +P
Sbjct: 188 S-DTSPTTPGGGGGYTP 203
Score = 29.5 bits (63), Expect = 1.1
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Query: 25 PAPSTSSAVDEPVASCSDAPVSKEG-PSECESGAASTSXXXXXXXXXXXXXXPTRPKTLD 83
P+PS+ ++ P CS +P + PS + +T P+ P T
Sbjct: 468 PSPSSGTSPSTPGGGCSSSPTPCDAPPSPSSDTSPTTPGGGYYPPTPSIGTSPSTPGTGG 527
Query: 84 LLPPPPRKEGKRSPQVNVWLEEQNVGSTFSGQNPESHITTLPERMNT 130
PP G +P +V + + + P S T +P NT
Sbjct: 528 GYYPPSPSTGGYTPTPDVPISTPSSPYSPLVPTPPSSTTPMPFDPNT 574
>08_02_1118 - 24419167-24420130,24420456-24420463
Length = 323
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 23 EQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTSXXXXXXXXXXXXXXPTRPKTL 82
E + STS+ + + S S P GP+ ++ A+++S PT P+
Sbjct: 256 EDASASTSATIQQFTLSSSARP----GPAHTDARASTSSTTMQLSSSSTP---PTAPRRR 308
Query: 83 DLLPPPPRKEGKR 95
D P PPR +R
Sbjct: 309 DDQPSPPRPAQRR 321
>04_03_0111 - 11361954-11363510
Length = 518
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 76 PTRPKTLDLLPPPPRKEGKRSPQVNVWLEEQNVGSTFSGQNPESHITTLPERM 128
PT P L P P E K++ + WL+EQ GS + T P+ M
Sbjct: 256 PTYPVGPLLRAPAPSPEAKKTSPILEWLDEQPPGSVLYISFGSLYRITAPQMM 308
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 25 PAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTS 61
P P ++A E VA + P S P+ SGAA T+
Sbjct: 22 PTPPAAAAEGEEVARQTSGPPSPATPTRSRSGAADTT 58
>01_03_0259 -
14312197-14312259,14312384-14312456,14312651-14312754,
14313073-14313192,14313278-14313364,14313925-14314023,
14314110-14314203,14314298-14314368,14315258-14316040
Length = 497
Score = 28.7 bits (61), Expect = 1.9
Identities = 25/96 (26%), Positives = 32/96 (33%), Gaps = 4/96 (4%)
Query: 25 PAPSTSSAVDE---PVASCSDAPVSKEGPSECESGAASTSXXXXXXXXXXXXXXPTRPKT 81
P PS+SS D P + P S ++ S + S + P
Sbjct: 36 PLPSSSSLADASSPPPSPPPPHPSSSSAAAQGPSSSYSAAAAAGAGGASTSYASSLPPSR 95
Query: 82 LDLLPPPPRKEGKRSPQVNVWLEEQNVGSTFSGQNP 117
L LPPPP V L +GS S NP
Sbjct: 96 LRRLPPPPPHPRPIHGPQRV-LRAFRLGSALSRSNP 130
>12_02_0320 - 17504511-17505016,17505757-17506147
Length = 298
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 79 PKTLDLLPPPPRKEGKRSPQVNVWLEEQNVGSTFSGQNPES 119
P+T PPPP ++ ++ P+ W Q G +PE+
Sbjct: 26 PQTTGNAPPPPPQQQQQQPEAAKWGTRQMGPPAAPGAHPEN 66
>04_03_0925 -
20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 20 NSPEQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTS 61
N P PAP+ +++ P S + A + PS ESG+ S +
Sbjct: 43 NPPITPAPARNASAAPPSGSPATAAAAAPVPSRKESGSTSAA 84
>09_04_0032 - 13953323-13955269
Length = 648
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 19 NNSPEQPAPSTSSAVDEPVASCSDAPVSK 47
N SP P+PS S + P A+ D+ SK
Sbjct: 233 NTSPPSPSPSPSPPIPPPPAASQDSKSSK 261
>08_02_1068 - 24076662-24077231
Length = 189
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 12 EVCHKMQNNSPEQPAPSTSSAVDEPVASCSDAP 44
E+ K+Q P QPAP ++A D+ +SCS P
Sbjct: 148 ELAGKLQLLLPRQPAPEKNAADDQ--SSCSSEP 178
>08_01_0474 - 4173245-4174195
Length = 316
Score = 27.9 bits (59), Expect = 3.4
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 19 NNSPEQPAPSTSSAVDEPVASCSDA------PVSKEGPSECESGAASTSXXXXXXXXXXX 72
+ SPE+ P+T A +E A+ + A P +++ P A
Sbjct: 144 SRSPERENPTTPKASEEEAAAAAAAFDDMGTPAARDIPEVTGFVRARVDEFHEKIEKKKK 203
Query: 73 XXXPTRPKTLDLLPPPPRK 91
+ LD+ PPPPR+
Sbjct: 204 AAKAADEEALDVAPPPPRR 222
>02_03_0212 -
16460665-16460766,16460971-16461298,16461379-16461502,
16461576-16461825,16462185-16462265,16463030-16463114,
16463200-16463321,16463865-16464672,16464775-16465027,
16465998-16466796
Length = 983
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/70 (22%), Positives = 25/70 (35%)
Query: 20 NSPEQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTSXXXXXXXXXXXXXXPTRP 79
++P P+P S++ + S S P S PS S ++ +
Sbjct: 35 STPPPPSPIPSTSPRPTLRSSSLPPASTPSPSSSASSSSGSLHHLHPTHSLPAFSAAAAA 94
Query: 80 KTLDLLPPPP 89
D PPPP
Sbjct: 95 AAADAWPPPP 104
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 25 PAPSTSSAVDEPVASCSDA--PVSKE---GPSECESGAASTS 61
PAPS++S P SC+ + P+++E PS GA+S S
Sbjct: 606 PAPSSASGASSPPKSCAASVDPLAQELMTAPSSSGDGASSAS 647
>11_06_0021 +
19314211-19314311,19315202-19315307,19317135-19317412,
19318587-19318692,19318812-19319159,19319237-19319313,
19319392-19319516,19319884-19320135,19320314-19320336
Length = 471
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 18 QNNSPEQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGA 57
++ P + SS DEPVA S+ +EG + SG+
Sbjct: 100 EDAQPTSDSNKISSNADEPVAKSSETDRDQEGDKDHSSGS 139
>10_01_0226 - 2401252-2401277,2403491-2403537,2404381-2405504
Length = 398
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 85 LPPPPRKEGKRSPQVNVWL----EEQNVG 109
LPPPP+ P VWL E++NVG
Sbjct: 347 LPPPPQLPASAKPMPLVWLMALDEDENVG 375
>06_01_1050 + 8262033-8262165,8262262-8262391,8262486-8263026
Length = 267
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 23 EQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTS 61
E AP ++A + ++CS +P S PS C S A++ S
Sbjct: 171 EITAPPPAAAAEAATSNCSVSPASVLSPS-CSSSASAAS 208
>04_01_0123 -
1283197-1283292,1283330-1284439,1284790-1285177,
1285523-1287609
Length = 1226
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 34 DEPVASCSDAPVSKEGPSECESGAASTS 61
+ VA+ P+SK P+E E+GA++TS
Sbjct: 5 ENAVATNQGDPMSKNPPAETENGASTTS 32
>03_05_0324 - 23121401-23121465,23121507-23122059
Length = 205
Score = 27.5 bits (58), Expect = 4.5
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 9 QAFEVCHKMQNNSPEQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTS 61
Q E+ + P PS + + + V + D+ +SK+ P+E E+G ++TS
Sbjct: 69 QVDEIVFPVYTTMPISTGPSITGSENGVVTTPVDS-MSKDPPAEAENGTSTTS 120
>02_05_0554 + 29929860-29929959,29932944-29934220
Length = 458
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 14 CHKMQNNSPEQPAPSTSSAVDEPVASCSDAPVSKEGPSECES 55
CH+ + ST ++V CSD P + PS C S
Sbjct: 157 CHRQSGPVFNPKSSSTYASVGCSAQQCSDLPSATLNPSACSS 198
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/71 (21%), Positives = 27/71 (38%)
Query: 19 NNSPEQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTSXXXXXXXXXXXXXXPTR 78
++SP + S+S P +SC +A S + + + + + P+
Sbjct: 5 SSSPATASASSSYGPTSPPSSCRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSSPSS 64
Query: 79 PKTLDLLPPPP 89
P L L P P
Sbjct: 65 PPPLPPLQPTP 75
>04_04_1359 - 32886181-32886789
Length = 202
Score = 27.1 bits (57), Expect = 5.9
Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Query: 4 VRTVGQAFEVCHKMQNNSPEQPAPSTSSAVDEPVAS--CSDAPVSKEGPSECESGAASTS 61
V + A+ + ++S P+ S+S + P +S C ++KE E AS
Sbjct: 106 VSPMDYAYVMASSSSSSSSSLPSSSSSLSPSPPASSSSCGVVVITKEEEEREEKAIASKG 165
Query: 62 XXXXXXXXXXXXXXPTRPKTLDLLP 86
RPK L L P
Sbjct: 166 FYLHSSPRSGGAGDGERPKLLPLFP 190
>04_03_0241 - 13243938-13244453,13244538-13246334
Length = 770
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 21 SPEQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTSXXXXX-XXXXXXXXXPTRP 79
SP Q + ++A + P S V K + SGA +T+ T P
Sbjct: 582 SPGQNIVAEAAATNTPRGSPKQNVVGKAAVTNTPSGATTTTTTSVTPAQLALDSLFATPP 641
Query: 80 KTLDLLPPPPRK 91
+ +PPP RK
Sbjct: 642 MAVIPMPPPIRK 653
>01_01_1142 -
9057212-9057541,9058650-9058754,9058826-9058919,
9059721-9059917
Length = 241
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 25 PAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTS 61
PA ++SA +P+A C A + EG + G S
Sbjct: 3 PASVSASASGDPMAECPPAAAAAEGSDAMDCGGGGRS 39
>08_02_0823 +
21557111-21557292,21557391-21557473,21557722-21557810,
21557985-21558058,21558264-21558314,21558406-21558482,
21560206-21560900
Length = 416
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/77 (22%), Positives = 28/77 (36%)
Query: 22 PEQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTSXXXXXXXXXXXXXXPTRPKT 81
P Q P +A P+ +P KE + + AAS+S + +
Sbjct: 280 PPQLRPLARAASTSPIGLLLRSPKFKEIIEQAAAAAASSSGSSSSSSTDSPSSSSSSSLS 339
Query: 82 LDLLPPPPRKEGKRSPQ 98
LP PP ++ P+
Sbjct: 340 PSPLPSPPPQQQPTVPK 356
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 2 RIVRTVGQAFEVCHKMQNNSPEQPAPSTSSAVDEPVASCSDAPVSKEGPSE 52
+IV+++GQ + S QPAP T + D+ + SD + +GP E
Sbjct: 411 QIVKSLGQITSILGGTTVISLLQPAPETYNLFDD-IILLSDGHIVYQGPRE 460
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 19 NNSPEQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGAAST 60
N P P PS+S+ ++ SD P +++ S + +ST
Sbjct: 178 NLEPSPPPPSSSAPPSRTPSNSSDGPTTRDNISSSKKQNSST 219
>04_03_0771 + 19434460-19434987
Length = 175
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 22 PEQPAPSTSSAVDEPVASCSDAPVSKEGPSECESGAASTS 61
P P PST+ AV EP A+ ++ G + +SG ++S
Sbjct: 117 PPSPEPSTA-AVAEPTAAVAEPAAVSRGRAREQSGGFTSS 155
>02_02_0628 +
12365109-12365150,12366315-12366411,12366489-12366554,
12367884-12367963,12368051-12368125,12368232-12368381,
12369816-12369881,12370141-12370206,12370653-12370763,
12370917-12371003,12371087-12371193,12372141-12372255,
12372472-12372537,12373521-12373615,12373700-12373880
Length = 467
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 22 PEQPAPSTSSAVDEPVASCSDAPVSKEGPSE 52
P++PAP+T+ A+ + P SK+G E
Sbjct: 399 PKKPAPTTTGGKRSQPATNGNTPASKKGRGE 429
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.127 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,651,035
Number of Sequences: 37544
Number of extensions: 197569
Number of successful extensions: 690
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 667
Number of HSP's gapped (non-prelim): 38
length of query: 145
length of database: 14,793,348
effective HSP length: 76
effective length of query: 69
effective length of database: 11,940,004
effective search space: 823860276
effective search space used: 823860276
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)
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