Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000652-TA|BGIBMGA000652-PA|undefined
(233 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 36 0.031
At4g32350.1 68417.m04605 expressed protein contains Pfam profile... 35 0.054
At3g28770.1 68416.m03591 expressed protein 33 0.22
At1g24560.1 68414.m03090 expressed protein 31 0.67
At5g60030.1 68418.m07527 expressed protein 31 0.88
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 31 0.88
At5g62390.1 68418.m07830 calmodulin-binding family protein conta... 30 1.2
At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar... 30 1.2
At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing ... 30 1.2
At4g40020.1 68417.m05666 hypothetical protein 30 1.5
At2g22795.1 68415.m02704 expressed protein 30 1.5
At3g11590.1 68416.m01416 expressed protein 29 2.0
At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)... 29 2.0
At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)... 29 2.0
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 29 2.7
At4g26020.1 68417.m03747 expressed protein weak similarity to ca... 29 2.7
At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein... 29 2.7
At3g27260.1 68416.m03407 DNA-binding bromodomain-containing prot... 29 2.7
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 29 2.7
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 29 2.7
At2g43650.1 68415.m05425 Sas10/U3 ribonucleoprotein (Utp) family... 29 2.7
At2g41550.1 68415.m05135 expressed protein 29 2.7
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 29 3.5
At5g55300.1 68418.m06891 DNA topoisomerase I identical to Swiss-... 29 3.5
At5g48385.1 68418.m05980 expressed protein 29 3.5
At3g59800.1 68416.m06673 expressed protein 29 3.5
At2g34680.1 68415.m04260 leucine-rich repeat family protein cont... 29 3.5
At2g33300.1 68415.m04081 hypothetical protein 29 3.5
At1g69200.1 68414.m07921 pfkB-type carbohydrate kinase family pr... 29 3.5
At4g00440.1 68417.m00061 expressed protein 28 4.7
At3g15400.1 68416.m01954 anther development protein, putative si... 28 4.7
At3g10680.1 68416.m01284 heat shock protein-related contains wea... 28 4.7
At2g37840.2 68415.m04646 protein kinase family protein contains ... 28 4.7
At2g37840.1 68415.m04645 protein kinase family protein contains ... 28 4.7
At1g44160.1 68414.m05100 DNAJ chaperone C-terminal domain-contai... 28 4.7
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 28 6.2
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 28 6.2
At3g55460.1 68416.m06159 SC35-like splicing factor, 30 kD (SCL30... 28 6.2
At3g44730.1 68416.m04814 kinesin motor protein-related similar t... 28 6.2
At3g03140.1 68416.m00310 expressed protein 28 6.2
At2g43110.1 68415.m05352 expressed protein 28 6.2
At2g12875.1 68415.m01402 hypothetical protein 28 6.2
At1g11310.1 68414.m01299 seven transmembrane MLO family protein ... 28 6.2
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 27 8.2
At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein... 27 8.2
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 27 8.2
At1g68790.1 68414.m07863 expressed protein 27 8.2
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 35.5 bits (78), Expect = 0.031
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 40 KPKEHQLRSKASKHDTKEK---KSHEKLKNSRSEPEFSEVRKKHRSRIEDG 87
K KEH ++ K +H+ K+K K H K S + + KKH+ + +DG
Sbjct: 73 KKKEHDVQKKDKQHENKDKDDEKKHVDKKKSGGHDKDDDDEKKHKDKKKDG 123
>At4g32350.1 68417.m04605 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 732
Score = 34.7 bits (76), Expect = 0.054
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 52 KHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSREYIGGARPRPLSVGAMKRYDK 111
KH+ E+ +H+K+++S S P + K I G ++ + VG D
Sbjct: 424 KHEKNEEHAHQKVEDSTSRPPKPNSKSKRAESINPGSRHHNDRESKENAVLVGKSTEEDP 483
Query: 112 DIEDFHGGSFIRDNSPLPNRRFDSSE 137
++ GG + D++ P R+ + E
Sbjct: 484 SGDNVKGGEYEYDHAN-PARKVEERE 508
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 2 SNTRDHSKKRRNEHNLKNLPSEVLLKARNTVVSLSGALKP--KEHQ-LRSKASKHDTKEK 58
S R K++ +LK E K + + K KEH+ +S + D KEK
Sbjct: 1043 SEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEK 1102
Query: 59 KSHEKLKNSRSEPEFSEVRK 78
K HE+ K+ + E + ++ K
Sbjct: 1103 KKHEESKSRKKEEDKKDMEK 1122
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 40 KPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIED 86
K + L++K + +TKEKK E K+ + E + K + ED
Sbjct: 1052 KEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEED 1098
>At1g24560.1 68414.m03090 expressed protein
Length = 678
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/63 (22%), Positives = 33/63 (52%)
Query: 3 NTRDHSKKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHE 62
NT DHSK+ ++L + ++ ++ +V L L+ + S + DT+ K+ ++
Sbjct: 446 NTHDHSKEDNEIYSLASTLENIVKASQLEIVELQHLLEASREETSSLRKQLDTQTKELNQ 505
Query: 63 KLK 65
+++
Sbjct: 506 RMR 508
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 30.7 bits (66), Expect = 0.88
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 9 KKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSR 68
K+R+ + + KN +V+ + L K E + + K D ++K EKL++ +
Sbjct: 183 KERKKKKSKKNNDEDVVDEKEK----LEDEQKSAEIKEKKKNKDEDVVDEKEKEKLEDEQ 238
Query: 69 SEPEFSEVRKKHRSRIEDGVSRE 91
E + +KK R E+ VS E
Sbjct: 239 RSGERKKEKKKKRKSDEEIVSEE 261
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 30.7 bits (66), Expect = 0.88
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 9 KKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEH-QLRSKASKHDTKEKKSHEKLKNS 67
+K + E K + ++L + + L K KE ++R + KE+ + +KL+
Sbjct: 140 RKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAAKKLQEE 199
Query: 68 RSEPEFSEVRKKHRSRIED 86
E E RK R+E+
Sbjct: 200 IEAKEKLEERKLEERRLEE 218
>At5g62390.1 68418.m07830 calmodulin-binding family protein contains
IQ calmodulin-binding motif, Pfam:PF00612
Length = 446
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 9 KKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSR 68
KK +N+ N +EV + N VS + +K + K KH+ KEKK EK++
Sbjct: 196 KKNKNKKKSYNWTTEVKSERENGEVSHTYIIKATTGGEKKK--KHEEKEKK--EKIETKS 251
Query: 69 SEPEFSEVRKKHRSRIEDGVSREY 92
+ E + V ED S E+
Sbjct: 252 KKKEKTRVVVIEEEEEEDDESSEH 275
>At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar to
SP|P23394 Pre-mRNA splicing factor RNA helicase PRP28
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00270: DEAD/DEAH box helicase, PF00271: Helicase
conserved C-terminal domain
Length = 733
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/60 (18%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 40 KPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSREYIGGARPR 99
+ ++ + R + +EK+ E++K +R + ++ ++ + + D + +Y+GG +P+
Sbjct: 116 RERDRRERDREPDRRNREKEREEEVK-AREKARVEKLVEREKEKELDAIKEQYLGGKKPK 174
>At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing
protein
Length = 561
Score = 30.3 bits (65), Expect = 1.2
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 13/141 (9%)
Query: 40 KPKEHQL-RSKASKHDTKEKKSHEKLKNSRSEPEFSEV------RKKHRSRIEDGVSREY 92
K ++H+ RS+ S+ ++ +S E+ K+ EP+ E R++H+ + ED V E
Sbjct: 116 KGRDHEKDRSRRSRSRSERHRSQEREKSLEIEPKERETKDRDRDRRRHKDKKEDKVEPEA 175
Query: 93 IGGARPRPLSVG--AMKRYDKDI-EDFHGGSFIRDNSPLP---NRRFDSSEEVCVQSRLV 146
R + A++ ++D+ E F +RD + +RR V +
Sbjct: 176 DPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMS 235
Query: 147 IPVMDRLGGHESIGQEVTERP 167
+P+ L G +GQ V +P
Sbjct: 236 VPMAIALSGQPLLGQPVMVKP 256
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 9 KKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSR 68
+K+R+ + +++P EV+ + + KE++ K SK KEKK H + K +
Sbjct: 375 EKQRSLNRQESMPKEVVEVVEKKIEEKEKKEEKKENKKEKKESK---KEKKEHSEKKEDK 431
Query: 69 SEPE 72
+ E
Sbjct: 432 EKKE 435
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 2 SNTRDHSKKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSH 61
+ T+D+ + E K+ +E + K + S + + + +S+ +TKEK+ +
Sbjct: 525 TETKDNEESSSQEET-KDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKE-N 582
Query: 62 EKLKNSRSEPEFSEVRKKHRSRIE 85
EK++ S P+ E ++K +IE
Sbjct: 583 EKIEKEESAPQ-EETKEKENEKIE 605
>At3g11590.1 68416.m01416 expressed protein
Length = 622
Score = 29.5 bits (63), Expect = 2.0
Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 5 RDHSKKRRNEHNLKNLPSEVL--LKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSH- 61
RD S+ + LK +V ++ ++ L+ AL+ + Q++ +KH +EK +
Sbjct: 372 RDISEDKAEVEELKRESFKVKEEVEKEREMLQLADALREERVQMKLSEAKHQLEEKNAAV 431
Query: 62 EKLKNS-RSEPEFSEVRKKHRSRIEDGVSREYIGGARPRPLSVGAMKRYDKDIED 115
+KL+N ++ + ++K R + + E G +S G+ D ++E+
Sbjct: 432 DKLRNQLQTYLKAKRCKEKTREPPQTQLHNEEAGDYLNHHISFGSYNIEDGEVEN 486
>At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 5 RDHSKKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKL 64
RD ++ N ++ + ++V+ S L+P + + HDTKE
Sbjct: 170 RDLPSQQTNPDRFTQTQEPLITSNKPSLVNFSHFLRPATFAKTTNNNLHDTKE------- 222
Query: 65 KNSRSEPEFSEVRKKHRSRIEDGVSREYIGGARPR 99
K+ +S P + R ED V E + A P+
Sbjct: 223 KSPQSPPNVFQTRVLGAKDSEDKVLNESVASATPK 257
>At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 5 RDHSKKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKL 64
RD ++ N ++ + ++V+ S L+P + + HDTKE
Sbjct: 170 RDLPSQQTNPDRFTQTQEPLITSNKPSLVNFSHFLRPATFAKTTNNNLHDTKE------- 222
Query: 65 KNSRSEPEFSEVRKKHRSRIEDGVSREYIGGARPR 99
K+ +S P + R ED V E + A P+
Sbjct: 223 KSPQSPPNVFQTRVLGAKDSEDKVLNESVASATPK 257
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 25 LLKARNTVVSLSGALKPKEHQLRSKAS--KHDTKEKKSHEKLKNSRSEPEFSE---VRKK 79
L+ +N + +SGA PK++ S + SH + N RS+P F E K
Sbjct: 627 LVAVQNKIAKVSGAGIPKKYHGDSSKDVVAGSDRVSSSHSQTANQRSKPAFGEKPTSTPK 686
Query: 80 HRSRIEDGVSRE 91
+R++ VSR+
Sbjct: 687 VATRLDVEVSRD 698
>At4g26020.1 68417.m03747 expressed protein weak similarity to
cardiac muscle factor 1 [Gallus gallus] GI:14422164
Length = 247
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/81 (22%), Positives = 34/81 (41%)
Query: 6 DHSKKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLK 65
+ S++ E + KNL E + SL+ EH+ + + K + K K K
Sbjct: 40 ESSRREVLEISNKNLKEENERLKKLYTESLNNFADQLEHRTKCHSLKEELKRVNDENKSK 99
Query: 66 NSRSEPEFSEVRKKHRSRIED 86
+R+KH +++E+
Sbjct: 100 EHEHRNALESLRQKHVTKVEE 120
>At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 595
Score = 29.1 bits (62), Expect = 2.7
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 35 LSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSREYIG 94
L G++ + + S K +K+ K H+K +SR+ E E + ED SRE G
Sbjct: 300 LEGSIPIEILKSMSSDKKRKSKKNKRHKK-HSSRTVEETDE----SSTGSED--SREKRG 352
Query: 95 GARPRPLSVGAMKRYDKDIEDFHGGSFIRDNSPLPNRR 132
+ + L + K+YD D F G D+ L RR
Sbjct: 353 SKKRKKLKKKSKKQYDSDSLSFEGSG--SDSYRLSRRR 388
>At3g27260.1 68416.m03407 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 813
Score = 29.1 bits (62), Expect = 2.7
Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 8 SKKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNS 67
S+KR LKN ++++LKAR + +G +K +LR + + ++KK +L+ +
Sbjct: 531 SEKRYRAALLKNRFADIILKAREKPLPQNG-IKGDPERLRKEREELVLQKKKEKARLQ-A 588
Query: 68 RSEPEFSEVRKKHRSRIEDGVSREYIGGARPRPLSVGAMKRYDKDIEDFHGGSFIRD--- 124
+E R+ + + R + A+ + +K +E F+ D
Sbjct: 589 EAEAAEDARRQAEAEAAAEAAAEAKRKRELEREAARQALLKMEKTVEINENSRFLEDLEM 648
Query: 125 -NSPLPNRRFDSSEE 138
+S P + S+EE
Sbjct: 649 LSSSAPEQLPSSAEE 663
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 46 LRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSREYIGGARPR----PL 101
L KA+K K+KK +++ + PEF EV K ++D E +P+ L
Sbjct: 774 LEGKANKKGKKKKKGNQRFVQVETFPEFGEV-KVEIDTMQDKEIEEICEAIKPKGGKTML 832
Query: 102 SVGAMKRYDKDIEDFHGGSFIRDNSP 127
+ + K+ DF S +DN P
Sbjct: 833 DTTMISGFPKE-SDFVSLSQKKDNPP 857
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 46 LRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSREYIGGARPR----PL 101
L KA+K K+KK +++ + PEF EV K ++D E +P+ L
Sbjct: 771 LEGKANKKGKKKKKGNQRFVQVETFPEFGEV-KVEIDTMQDKEIEEICEAIKPKGGKTML 829
Query: 102 SVGAMKRYDKDIEDFHGGSFIRDNSP 127
+ + K+ DF S +DN P
Sbjct: 830 DTTMISGFPKE-SDFVSLSQKKDNPP 854
>At2g43650.1 68415.m05425 Sas10/U3 ribonucleoprotein (Utp) family
protein contains Pfam profile PF04000: Sas10/Utp3
family; contains Prosite PS00761: Signal peptidases I
signature 3; weak similarity to PEBP2 beta-binding
protein / charged amino acid rich leucine zipper
factor-1 (GI:12061569) [Mus musculus]
Length = 654
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 1 MSNTRDHSKK----RRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTK 56
+ N R+ KK R+++++L ++ SE +LK R +L G L+ L S SK D
Sbjct: 378 IDNAREEKKKKGEKRKHQNDLVDVQSEEMLKLR---AALEGKLR-TNGVLGSTVSKSDKA 433
Query: 57 EKKSHEKLKNSRSE 70
+K+ +KL N + E
Sbjct: 434 QKR--QKLANRKLE 445
>At2g41550.1 68415.m05135 expressed protein
Length = 475
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 51 SKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSREYIGGARPRPLSVGAMKRYD 110
SK D E+ S L ++ F +++ ++ +SRE IGG+ RPL + ++ +
Sbjct: 187 SKIDEAEEHSCSSLV---TDQVFDPIKQALENKSSSAISRESIGGSTLRPLHLETREKAN 243
Query: 111 KDIEDFHGGSFIRDN 125
ED G ++D+
Sbjct: 244 TTDED---GDILKDH 255
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 9 KKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSR 68
KK++ E +K + E +K + V+ G + K+ + +SK+ + D ++K +K K R
Sbjct: 124 KKKKKETKVK-VTEEEKVKETDAVIE-DGVKEKKKKKSKSKSVEADDDKEKVSKKRK--R 179
Query: 69 SEPE 72
SEPE
Sbjct: 180 SEPE 183
>At5g55300.1 68418.m06891 DNA topoisomerase I identical to
Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis
thaliana]
Length = 916
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 34 SLSGALKPKEHQL---RSKASKHDTKEKKSHEKLK-NSRSEPEFSEVRKKHRSRIEDGV 88
S S A KPK + RS+A +TK+ K +S+S P + +KK + + +GV
Sbjct: 321 STSSAAKPKARNVVSPRSRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGV 379
>At5g48385.1 68418.m05980 expressed protein
Length = 558
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 35 LSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSE 75
L +LK + H+L + +++TK +K+ E L+ ++ E E
Sbjct: 50 LERSLKRRFHELEDQEKEYETKTRKAQELLEKKKAAVEAKE 90
>At3g59800.1 68416.m06673 expressed protein
Length = 186
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 40 KPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSREYIGGARPR 99
K K+ + R S ++ ++ + SRS + S+ KKH+S + S+ P
Sbjct: 116 KKKKSKKRKHYSSSESSSSSDEDESRRSRSSSKRSKKEKKHKSSRDKHSSKSKHETDGPV 175
Query: 100 PLS 102
PLS
Sbjct: 176 PLS 178
>At2g34680.1 68415.m04260 leucine-rich repeat family protein contains
leucine rich repeat (LRR) domains, Pfam:PF00560;
identical to cDNA hypothetical protein (AIR9) mRNA,
partial cds GI:3695020
Length = 1661
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 140 CVQSRLVIPVMDRLGGHESIGQEVTERPRKKL 171
C + + V+P GGHE +G+ + R + KL
Sbjct: 1124 CCEKQEVVPHKTYFGGHEGVGEYIWYRTKVKL 1155
>At2g33300.1 68415.m04081 hypothetical protein
Length = 265
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 32 VVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSRE 91
VV +S L E Q RS+A+ H+T + K + K ++ K +S + +S+
Sbjct: 87 VVQVSSNLNKTEDQ-RSRAANHETGKTKQNLKKPGDYKSFAARTIQVKKKSALPMKLSKN 145
Query: 92 YIGGARPRPLSVG----AMKRYDKDI 113
G P++ +K+ DKD+
Sbjct: 146 PRSGEHGPPVNASKGCPVLKKNDKDL 171
>At1g69200.1 68414.m07921 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 614
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 34 SLSGALKPKEHQLRSK--ASKHDTKEKKSHEKLKNSRSEPEFSEV 76
S+ ALKPK+ + R K A+ D +E K+ +K++ R+ + +V
Sbjct: 110 SIVSALKPKKTRTRKKAAAASSDVEEVKTEKKVRRKRTVKKDKDV 154
>At4g00440.1 68417.m00061 expressed protein
Length = 831
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 37 GALKPKEHQLRSKASKHDTKEKKSH-EKLKNSRSEPEFSEVRKKHRSRI 84
G K K+H + +K T +KKSH E K R ++E KKH S +
Sbjct: 358 GFPKTKDHFFLERMAKPSTSQKKSHSEDDKKQRVSNIYTEA-KKHLSEM 405
>At3g15400.1 68416.m01954 anther development protein, putative
similar to anther development protein ATA20 GB:AAC50042
GI:2708813 from [Arabidopsis thaliana]
Length = 416
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 23 EVLLKARNTVVSLSGALKPKE------HQLRSKASKHDTKEKKSHEKLKNSRSE-PEFSE 75
E +K +T+ S+SGAL+ E H+L+S +H ++K KL++ E PE E
Sbjct: 81 EHTVKPGHTLQSMSGALEHPEHKEKPDHKLQSMLGEHPEHKEKPDHKLQSMLGEHPEHKE 140
>At3g10680.1 68416.m01284 heat shock protein-related contains weak
similarity to Pfam profile PF00011: Hsp20/alpha
crystallin family
Length = 490
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 22 SEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLK--NSRSEPEF-SEVRK 78
SE +KAR + SL G + KE ++ + ++K +KLK ++S P ++
Sbjct: 195 SEAKVKAREAIPSLGGRERAKEEKVVERKEAAHIVQQKIGDKLKEEEAKSTPTLGGSLKP 254
Query: 79 KHRSRIEDGVSRE 91
K +++ E + R+
Sbjct: 255 KVQAKEEKVIERK 267
>At2g37840.2 68415.m04646 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 596
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 32 VVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIE 85
+ L G+ ++LRS + KHDT L + SE S+++++ IE
Sbjct: 423 ISGLEGSPSQDINKLRSSSLKHDTHSSNKVTDLSHDGSEEISSQIQRQFIQEIE 476
>At2g37840.1 68415.m04645 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 733
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 32 VVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIE 85
+ L G+ ++LRS + KHDT L + SE S+++++ IE
Sbjct: 560 ISGLEGSPSQDINKLRSSSLKHDTHSSNKVTDLSHDGSEEISSQIQRQFIQEIE 613
>At1g44160.1 68414.m05100 DNAJ chaperone C-terminal
domain-containing protein contains Pfam profile
PF01556: DnaJ C terminal region
Length = 357
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 34 SLSGALKPKEHQLRSKASKHDTKEKK--SHEKLKNSRSEPEFSEVRKKHRSRIEDGVS 89
S+S L P++ +KHDTKE K E +N+ + EF E + ++ +GVS
Sbjct: 27 SISRVL-PRDKTKHHHKAKHDTKETKRLDEEHKRNTPNAFEFRETKGIGKNNKVEGVS 83
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 27 KARNTVVSLSGALKPKEHQLRSKASKHDTKEK-----KSHEKLKNSRSEPEFSEVRKKHR 81
K R+T+ L G+L+PKE+++ + K++ K + R + +E+ KH+
Sbjct: 231 KLRDTIEELRGSLQPKENKIETLQQSLLDKDQILEDLKKQLQAVEERKQIAVTELSAKHQ 290
Query: 82 SRIE 85
+E
Sbjct: 291 KNLE 294
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 27 KARNTVVSLSGALKPKEHQLRSKASKHDTKEK-----KSHEKLKNSRSEPEFSEVRKKHR 81
K R+T+ L G+L+PKE+++ + K++ K + R + +E+ KH+
Sbjct: 231 KLRDTIEELRGSLQPKENKIETLQQSLLDKDQILEDLKKQLQAVEERKQIAVTELSAKHQ 290
Query: 82 SRIE 85
+E
Sbjct: 291 KNLE 294
>At3g55460.1 68416.m06159 SC35-like splicing factor, 30 kD (SCL30)
nearly identical to SC35-like splicing factor SCL30, 30
kD [Arabidopsis thaliana] GI:9843657;
Serine/arginine-rich protein/putative splicing factor,
Arabidopdis thaliana, EMBL:AF099940; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 262
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 67 SRSEPEFSEVRKKHRSRIEDGVSREYIGGARPRPLSVGAMKRYDKDIEDFHGGSFIRDNS 126
SR PE V+ + RSR G G +R R +S R D + R S
Sbjct: 126 SRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRYRS---RSYS 182
Query: 127 PLPNRR 132
P P RR
Sbjct: 183 PAPRRR 188
>At3g44730.1 68416.m04814 kinesin motor protein-related similar to 4
other kinesin-like proteins of A. thaliana: F02P16.12
(PID:g2191180), katA (D11371), katB (D21137), and katC
(D21138); contains non-consensus AT-AC splice sites at
intron 10
Length = 1087
Score = 27.9 bits (59), Expect = 6.2
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 1 MSNTRDHSKKRRNEHNL-KNLP-SEVLLKARNTVV-SLSGA-LKPKEHQLRSKASKHDTK 56
+S R + K RN+ ++ +NLP S AR VV S S L P + + ++
Sbjct: 834 LSTDRASTIKSRNKPDVTQNLPVSRTPFPARVPVVKSFSTVPLNPSAENNHRLHTDNSSE 893
Query: 57 EKKSHEKLKNSRSEPEFSEVRKKHRSRIEDG 87
++H+KL + PE E +H I G
Sbjct: 894 AFQNHQKLSARKLFPEIEEEHIRHALHIRQG 924
>At3g03140.1 68416.m00310 expressed protein
Length = 769
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 61 HEKLKNSRSEPEFS-EVRKKHRSRIEDGVSREY 92
H+ +N R+ P S RK HR+R+EDG EY
Sbjct: 390 HKGKRNFRTLPRRSARKRKLHRNRLEDGRYCEY 422
>At2g43110.1 68415.m05352 expressed protein
Length = 288
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 31 TVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSRSE-PEFSEVRKKHRS 82
T + S PK ++ S K D K+KK+ K +S+ P F + +K RS
Sbjct: 4 TELKPSAVKNPKRNRRPSHGPKKDLKKKKTKITKKTKKSKAPTFDKTIEKSRS 56
>At2g12875.1 68415.m01402 hypothetical protein
Length = 325
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 42 KEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKK 79
K H+ + S+ D +EK E+ K E E E KK
Sbjct: 17 KSHKNEEEKSEKDEEEKSEEEESKEEEKEEEEKEEEKK 54
>At1g11310.1 68414.m01299 seven transmembrane MLO family protein /
MLO-like protein 2 (MLO2) idenctical to membrane protein
Mlo2 [Arabidopsis thaliana] gi|14091574|gb|AAK53795;
similar to Mlo [Hordeum vulgare subsp. vulgare]
gi|1877221|emb|CAB06083 SWISS-PROT:P93766
Length = 573
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 43 EHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEV 76
EHQ S+H E +H L + SEP + V
Sbjct: 522 EHQFWDPESQHQEAETSTHHSLAHESSEPVLASV 555
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 40 KPKEHQLRSKASKHDTKEKKSHEKL--KNSRSEPEFSEVRKKHRSRIEDGVSREYIGGAR 97
+ +E Q+R + + D + +K E+L + R E + + + + R E + +E I +
Sbjct: 358 RKREEQIRKEMERQDRERRKEEERLLREKQREEERYLKEQMRELQRREKFLKKETIRAEK 417
Query: 98 PR 99
R
Sbjct: 418 MR 419
>At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 551
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 22 SEVLLKARNTVVSLSGALKPKEHQLRSKASKHDT--KEKKSHEKLKNSRSEPEFSEVRKK 79
S+V + R T + + K + ++ H++ K KK +K + +P+ S ++K
Sbjct: 375 SQVSKRDRETSTTSHKSRKKNKENSEHDSTPHESNGKTKKKKKKKTHKEEQPQTSPRKRK 434
Query: 80 HRSR--IEDGVSREYIGGARPRPLS 102
HR E+ + G RP S
Sbjct: 435 HRGGWITEEPEEESFQRGKMRRPKS 459
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 12 RNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLK 65
++ LK L + K+ + + +L+ EH+ + K D +EKK E LK
Sbjct: 265 KDNAELKKLMLDTKGKSIVVIEDIDCSLELTEHRKKKKEEDEDKEEKKEAENLK 318
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.5 bits (58), Expect = 8.2
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 1 MSNTRDHSKKRRNEHNLKN----LPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTK 56
M N R KK + NL+ SE+ K + + L+ + KE + +K D K
Sbjct: 272 MENERTIEKKEKILENLQQKISVAKSELTEKEESIKIKLND-ISLKEKDFEAMKAKVDIK 330
Query: 57 EKKSHEKLKN--SRSEPEFSEVRKKHRSRIEDGVSREY 92
EK+ HE +N R + E ++ ++ + D RE+
Sbjct: 331 EKELHEFEENLIEREQMEIGKLLDDQKA-VLDSRRREF 367
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.311 0.128 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,958,057
Number of Sequences: 28952
Number of extensions: 212686
Number of successful extensions: 787
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 750
Number of HSP's gapped (non-prelim): 67
length of query: 233
length of database: 12,070,560
effective HSP length: 79
effective length of query: 154
effective length of database: 9,783,352
effective search space: 1506636208
effective search space used: 1506636208
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 58 (27.5 bits)
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