Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000652-TA|BGIBMGA000652-PA|undefined
(233 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 30 0.25
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 30 0.25
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 30 0.33
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 29 0.44
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 29 0.58
SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual 29 0.77
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 1.3
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 27 1.8
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 2.3
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 27 2.3
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 27 2.3
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 27 3.1
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 26 4.1
SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 5.4
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 26 5.4
SPCC1739.02c |mrpl22||mitochondrial ribosomal protein subunit L2... 26 5.4
SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33 |Schizo... 26 5.4
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 26 5.4
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 25 7.1
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 25 7.1
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 7.1
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 25 7.1
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 25 7.1
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 25 7.1
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 25 9.4
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 25 9.4
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 30.3 bits (65), Expect = 0.25
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 2 SNTRDHSKKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSH 61
S++ + +++R +H+ K K S AL PK+ + +K K + K+K
Sbjct: 158 SSSDEAKREKRKKHSSK--------KKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKE 209
Query: 62 EKLKNSRSEPEFSEVRKKHRSRIED 86
K +S E +KK + +++D
Sbjct: 210 SSSKKRKSGSSDKEEKKKKKIKLKD 234
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 30.3 bits (65), Expect = 0.25
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 41 PKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSREYI 93
P + ++ +E H+ N++S E RK H ED SR+YI
Sbjct: 228 PMDKEMEKIVEMDLEEEDMMHQNDPNNQSPKLLKEFRKLHEPNAEDAPSRDYI 280
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 29.9 bits (64), Expect = 0.33
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 9 KKRRNEH--NLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKN 66
KK NE +L LP E +K +T S A+ K H++ + + KK++E+ N
Sbjct: 924 KKECNEKIKSLGVLPEEAFIKYVSTS---SNAIVKKLHKINEALKDYGSVNKKAYEQFNN 980
Query: 67 SRSEPEFSEVRKKHRSRIEDGVS 89
+ + R++ R ++ +S
Sbjct: 981 FTKQRDSLLARREELRRSQESIS 1003
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 29.5 bits (63), Expect = 0.44
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 48 SKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSR 83
SK K D KEKK EK K RS + SE KK + +
Sbjct: 459 SKKEKKDKKEKKK-EKSKKKRSADDASEEVKKSKKK 493
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 29.1 bits (62), Expect = 0.58
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 33 VSLSGALKPKEHQLRSKASK--HDTKEKKSHEKLKNSRSEP 71
+S AL+ K ++ + + SK HD E++S K S+SEP
Sbjct: 13 ISTKNALEEKSNETKDETSKRKHDPAEEESAVSTKVSKSEP 53
>SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual
Length = 629
Score = 28.7 bits (61), Expect = 0.77
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 36 SGALKPKEHQLRSKASKHD--TKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSREYI 93
S L HQ + D T E ++++ L S + F + + E S+ +
Sbjct: 282 SDELNTLSHQADDEGDTTDEETPELQNNKLLNLSTPKKSFGQTPRIKTELSESPNSQRTL 341
Query: 94 GGARPRPLSVGAMKRYDKDIEDFHGGSFIRDNS 126
A P PL + A Y +D+ + I DNS
Sbjct: 342 LSAVPTPLELSAELAYKEDLTSLASRANISDNS 374
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 27 KARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSRSE 70
KA+N S A P+ ++R K K +EKK EKL+ + +
Sbjct: 157 KAQNNNES-EAAAPPEIPEVRVKTKKEKEREKKEREKLRKKQQQ 199
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 18 KNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVR 77
+N E + ++ + S + K+ + R KH K K+ EK +NS +E ++
Sbjct: 505 ENREGETITRSGIAISSTEMDHQQKQARRRRVRRKHAEKRKQMAEKRRNSGTEQVVRQLS 564
Query: 78 KKHRSRIEDGVSREYI 93
K + I G R+ +
Sbjct: 565 KSNVEVIGKGGERKKV 580
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/45 (24%), Positives = 25/45 (55%)
Query: 42 KEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIED 86
K+ +L + + K+K+ +KLK + E + ++ ++ R R E+
Sbjct: 653 KQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEE 697
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 42 KEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIE 85
+E +LR + K +E+K EKL E E+ +K E
Sbjct: 689 REQRLREEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKE 732
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 27.1 bits (57), Expect = 2.3
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 46 LRSKASKHDTKEKKSHEKLKNSRSEPEFSE-VRKKHRSRIEDGVSREY 92
L K+ + D+K KKS ++ K+ E E V + S + GV+R Y
Sbjct: 334 LEKKSLQSDSKNKKSQKRKKDEDLRKEAEENVNSRVISAVLTGVNRAY 381
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 27.1 bits (57), Expect = 2.3
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 33 VSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKH 80
+++ G+++ K QL S+ ++ SH KLK+ S EF EV K+
Sbjct: 622 IAILGSMRKKAFQLLRSGSELAHGQRPSHPKLKDFSSWGEF-EVHVKN 668
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 26.6 bits (56), Expect = 3.1
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 6 DHSKKRRNEHNLKNLPSEVLLKARNTV-VSLSGALKPKEHQLRSKASKHDTKEKKSHEKL 64
+H +K E K S++ + R V L+ L +E++LR K D E+
Sbjct: 435 EHRQKIVKERLEKQRASKIRSQNRPKVNAGLASRLSYQENKLRKKTGVTDGPSILEDERF 494
Query: 65 KNSRSEPEFS------EVRKKHRSRIE 85
KN ++ EF E ++ H SR E
Sbjct: 495 KNVFTDKEFEVDEDTLEYKQLHPSRSE 521
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 3 NTRDHSKKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHE 62
NTR +K + E LK +E + +VS +GA + + L + S ++ ++ +
Sbjct: 530 NTRREKRKSKKEF-LKAQKNEASNNLKQEIVSKAGAQETENDDLIDEESDALSELEEDYR 588
Query: 63 KLKNSR 68
+LK S+
Sbjct: 589 QLKKSK 594
>SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 50 ASKHDTKEKKSHEKLKNSR-SEPEFSEVRKK 79
+SK D + K HEKL+N + + E+SE K+
Sbjct: 82 SSKQDIELHKLHEKLRNGQITTKEYSEKSKE 112
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 25.8 bits (54), Expect = 5.4
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 7 HSKKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKS----HE 62
H + ++ N+ L S +L + ++ V + + KAS +TK +K+
Sbjct: 42 HDPHQNDDSNIPGLGSGLLERIKDIVQRPTDTQLKGQDSNHKKASLTETKTEKAKVKPKA 101
Query: 63 KLKNSRSEPEFSEVRKKHRSRI-EDGVSR 90
K KNS+ + S + +H++ + ++ VS+
Sbjct: 102 KKKNSKEKISKSSKQDEHKTDVHKESVSK 130
>SPCC1739.02c |mrpl22||mitochondrial ribosomal protein subunit
L22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 113 IEDFHGGSFIRDNSPLPNRRFDSSEEVCVQSRLVIPVMDRLGGHESIGQEVTERPRKKLS 172
+ +F GS++R+++ P S + + S L D + + V ERPR ++S
Sbjct: 38 VREFSNGSYLRESAQNP-ANLGSQKGSDIFSMLANQKDD--SNRQQKEERVKERPRSRIS 94
Query: 173 FRE 175
F++
Sbjct: 95 FKK 97
>SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 8 SKKRRNEHNLKNLPSEVLL 26
+KK+ +EH +K L +EVLL
Sbjct: 62 NKKKHDEHKIKKLRNEVLL 80
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 5.4
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 13 NEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPE 72
N++ K L +T +G+L+ SK T+ K+H+KL + S +
Sbjct: 56 NKYGEKKSRKSSALSVGDTPAMSAGSLECASLTTWSKILDELTRSSKTHQKLSDDYS-LD 114
Query: 73 FSEVRKKHRSRIE 85
+E KK S IE
Sbjct: 115 IAEKLKKLESHIE 127
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 48 SKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHR 81
SK K + K+KK H+K K E E E KK +
Sbjct: 469 SKKEKKEKKDKK-HKKSKRKSEESEDGESPKKKK 501
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 25.4 bits (53), Expect = 7.1
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 22/132 (16%)
Query: 31 TVVSLSGALKPKE-HQLRSKASKHDTKEKKSHEKLKNSRSEP--EFSEVRKKHRSRIEDG 87
T V+LS KP H L KAS + + +K L+ SRS S++ + R ++ G
Sbjct: 455 TQVALSD--KPVNLHTLYIKASSSEMRSRKRAMDLQLSRSVVIIRISDLAGRIRVSLQ-G 511
Query: 88 VSREYIGGARP-----RPLSVGAMKR----YDKDIEDFHGGSFIRDNSP-------LPNR 131
Y+ G P RP SV M + K+ GS +S +P
Sbjct: 512 DDAVYVSGRSPSFAASRPSSVDFMSQSTDSLSKNDTTASNGSMTPSSSQNNSVIIDIPRS 571
Query: 132 RFDSSEEVCVQS 143
FD++ EVC+++
Sbjct: 572 HFDNAGEVCLEN 583
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.4 bits (53), Expect = 7.1
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 1 MSNTRDHSKKRRNEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQ--LRSKASKHDTKEK 58
+ NT++ E +++ LK T + L K H+ L ++ +D + +
Sbjct: 615 IDNTKEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIE 674
Query: 59 KSHEKLKNSRSEPEFSEVRKKHRSRIED 86
+ K + E E +R+ H S I+D
Sbjct: 675 LDYTKSNCKQMEEEMQVLREGHESEIKD 702
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 7.1
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 13 NEHNLKNLPSEVLLKARNTVVSLSGALKPKEHQL--RSKASKHDTKEKKSHEKLKNSRS 69
+EH ++ PS LLK N L +L K + RSK K K S K+ ++
Sbjct: 562 SEHEMEATPSPALLKKTNKRRELPSSLTKKNTRTPQRSKEVKKVPARKLSQSTKKSDKN 620
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 40 KPKEHQLRSKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSREYI 93
K ++ +L K K KE++ + K +N R + + +E+ + + V +Y+
Sbjct: 546 KKEQDRLSGKFEKMTQKEREQYAKKENERWDKKIAEIELEQFHDYKPQVDIKYV 599
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 48 SKASKHDTKEKKSHEKLKNSRSEPEFSEVRKKHRSRIEDGVSREYIGGARPRPLSVGAMK 107
+ ++K +K K+S E N+R++ + SE + +R A RPL++ +
Sbjct: 104 ASSNKTFSKRKRSSENSFNNRNKAKSSETSDSSNTSQSFKENRALKDTATSRPLALSSDT 163
Query: 108 RYDK 111
Y K
Sbjct: 164 SYQK 167
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 25.0 bits (52), Expect = 9.4
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 74 SEVRKKHRSRIEDGVSREYIGGARPRPLSVGAMKRYD---KDIEDFHGGSFIRDNSPLPN 130
SE K S S +Y+ S+G ++ D KD+ H + N+PL
Sbjct: 256 SEQLVKDASLPSGPFSTDYLENGSDLKRSLGHNQKSDRVSKDVSPQHQANPSTLNNPLKT 315
Query: 131 RRFDSSEEVCVQSR 144
+ FDSS+ + ++
Sbjct: 316 QNFDSSKNLYTDNK 329
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 142 QSRLVIPVMDRLGGHESIGQEVTERPRKKLS 172
+SR P RLGG+ + E+TE R+ ++
Sbjct: 10 RSRASSPTPARLGGYAPLRVEITEEQRQDIN 40
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.128 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 948,992
Number of Sequences: 5004
Number of extensions: 38888
Number of successful extensions: 155
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 136
Number of HSP's gapped (non-prelim): 31
length of query: 233
length of database: 2,362,478
effective HSP length: 71
effective length of query: 162
effective length of database: 2,007,194
effective search space: 325165428
effective search space used: 325165428
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 52 (25.0 bits)
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