GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000651-TA|BGIBMGA000651-PA|IPR006020|Phosphotyrosine
interaction region
         (140 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            29   0.057
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            29   0.057
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            29   0.057
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            29   0.057
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            29   0.057
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    23   3.8  

>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 29.1 bits (62), Expect = 0.057
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 66  QASETIEIMHH-PIYRIFYVSHDSSDLKIFSYIARDG 101
           Q   ++ IMH  P+++I Y + +    K FS+IA+ G
Sbjct: 55  QEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTG 91


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 29.1 bits (62), Expect = 0.057
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 66  QASETIEIMHH-PIYRIFYVSHDSSDLKIFSYIARDG 101
           Q   ++ IMH  P+++I Y + +    K FS+IA+ G
Sbjct: 55  QEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTG 91


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 29.1 bits (62), Expect = 0.057
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 66  QASETIEIMHH-PIYRIFYVSHDSSDLKIFSYIARDG 101
           Q   ++ IMH  P+++I Y + +    K FS+IA+ G
Sbjct: 55  QEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTG 91


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 29.1 bits (62), Expect = 0.057
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 66  QASETIEIMHH-PIYRIFYVSHDSSDLKIFSYIARDG 101
           Q   ++ IMH  P+++I Y + +    K FS+IA+ G
Sbjct: 55  QEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTG 91


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 29.1 bits (62), Expect = 0.057
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 66  QASETIEIMHH-PIYRIFYVSHDSSDLKIFSYIARDG 101
           Q   ++ IMH  P+++I Y + +    K FS+IA+ G
Sbjct: 55  QEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTG 91


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 107 KCNVFKSKRKHFEKQVSRYGINNDVE 132
           K  V K     FEK+V  YGI  +V+
Sbjct: 27  KVEVKKVVNPLFEKRVKNYGIGQNVQ 52


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.135    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,233
Number of Sequences: 2123
Number of extensions: 3684
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 11
length of query: 140
length of database: 516,269
effective HSP length: 58
effective length of query: 82
effective length of database: 393,135
effective search space: 32237070
effective search space used: 32237070
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 44 (21.8 bits)