GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000651-TA|BGIBMGA000651-PA|IPR006020|Phosphotyrosine
interaction region
         (140 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   8.6  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 4/40 (10%)

Query: 2   DVPRPTSRVEIVAAMRRVRYEFKARGVKKRKVIVDVSTDG 41
           D  +PT   E++  +R+V +E    G+   K   D + DG
Sbjct: 501 DAMKPTKGTELLKYLRKVDFE----GLSGDKFKFDKNGDG 536


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/27 (25%), Positives = 15/27 (55%)

Query: 74  MHHPIYRIFYVSHDSSDLKIFSYIARD 100
           +H  +   +Y+   S+D+   SY++ D
Sbjct: 261 LHKQVLNRYYLERLSNDMGEVSYVSLD 287


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.135    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,402
Number of Sequences: 429
Number of extensions: 1211
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 140
length of database: 140,377
effective HSP length: 52
effective length of query: 88
effective length of database: 118,069
effective search space: 10390072
effective search space used: 10390072
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)