GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000650-TA|BGIBMGA000650-PA|undefined
         (70 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   1.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   2.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   2.2  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    19   6.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      19   6.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      19   6.6  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 1.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 36  STKEYNLVPNDEFDTRIPLHSDEA 59
           +TK+ N V  DE +  I  H D+A
Sbjct: 906 TTKDPNEVTCDEEEGHISYHPDKA 929


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.2 bits (40), Expect = 2.2
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 4/31 (12%)

Query: 13  VILKARTWKRVPMRLLKWRKKMTSTKEYNLV 43
           +ILK  T+  V    +KW      + EYNLV
Sbjct: 171 LILKENTYDAV----IKWSPNEDYSCEYNLV 197


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 2.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)

Query: 20  WKRVPMRLLKWRKKMTSTKEYNL 42
           W RV M L  W+   +  +++ L
Sbjct: 292 WSRVEMALDNWKNDKSLKRKFYL 314


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
          protein protein.
          Length = 372

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 1/18 (5%)

Query: 38 KEYNLVPNDEFDT-RIPL 54
          K YN+  N E+DT  +PL
Sbjct: 57 KIYNIQNNFEYDTASLPL 74


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 5/12 (41%), Positives = 9/12 (75%)

Query: 42  LVPNDEFDTRIP 53
           L P++ FD ++P
Sbjct: 725 LTPHEAFDVKLP 736


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 5/12 (41%), Positives = 9/12 (75%)

Query: 42  LVPNDEFDTRIP 53
           L P++ FD ++P
Sbjct: 617 LTPHEAFDVKLP 628


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.138    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,148
Number of Sequences: 317
Number of extensions: 498
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 70
length of database: 114,650
effective HSP length: 44
effective length of query: 26
effective length of database: 100,702
effective search space:  2618252
effective search space used:  2618252
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.3 bits)
S2: 35 (18.2 bits)