Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000650-TA|BGIBMGA000650-PA|undefined
(70 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 25 0.93
SPAC23H3.14 |||LAlv9 family protein|Schizosaccharomyces pombe|ch... 24 2.1
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 24 2.8
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 24 2.8
SPBC16E9.05 |erg6||delta-sterol C-methyltransferase |Schizosacch... 23 3.7
SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharo... 23 3.7
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 23 3.7
SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase |Schi... 23 6.5
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 22 8.6
SPBC660.12c |||peptide epimerase |Schizosaccharomyces pombe|chr ... 22 8.6
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 22 8.6
SPAPB1A10.11c |||glutamyl-tRNA synthetase, mitochondrial|Schizos... 22 8.6
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 25.4 bits (53), Expect = 0.93
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 39 EYNLVPNDEFDTRIPLHSDEAFDY 62
++NL+ N EF+ I LH D+ Y
Sbjct: 264 QHNLLQNFEFENPIKLHFDKIIPY 287
>SPAC23H3.14 |||LAlv9 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 24.2 bits (50), Expect = 2.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 27 LLKWRKKMTSTKEYNLVPNDEFDTRIPLH 55
LL+W K T N+ +D FD +P H
Sbjct: 401 LLEWMKTNTFRIWNNIADDDLFDVILPKH 429
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 23.8 bits (49), Expect = 2.8
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 14 ILKARTWKRVPMRLLKWRKKMTSTKEYNLVPNDEF 48
I+K+ T+ +P+ + ++K T K NL+ DEF
Sbjct: 314 IVKSSTY--IPISIPTQKQKPTLPKNSNLINEDEF 346
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 23.8 bits (49), Expect = 2.8
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 3 RRDGKTRYVRVILKARTWKRVPMRLLKWRKKMTSTKEYNLVP 44
R+DGK ++ IL + P+ ++ K + S K N++P
Sbjct: 56 RKDGKVYALKRILMHTEKEGFPITAIREIKILKSIKHENIIP 97
>SPBC16E9.05 |erg6||delta-sterol C-methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 23.4 bits (48), Expect = 3.7
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 40 YNLVPNDEFDTRIPLHSDEAFD 61
Y V +D++D+ IP H + A++
Sbjct: 228 YEWVMSDDYDSSIPKHREIAYN 249
>SPBC8D2.05c |sfi1||spindle pole body protein
Sfi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 840
Score = 23.4 bits (48), Expect = 3.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 48 FDTRIPLHSDEAFDYGIAFQ 67
FDT +P+ +DE D + F+
Sbjct: 795 FDTTLPMQNDEFTDESVNFE 814
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 23.4 bits (48), Expect = 3.7
Identities = 10/33 (30%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 31 RKKMTSTKEYNLVPNDEFDTRIPLHSDEAFDYG 63
R+ M ST ++P+++ D ++P +S+ +YG
Sbjct: 187 RRNMDSTV---IIPSEDEDLQLPSNSNSNVEYG 216
>SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 22.6 bits (46), Expect = 6.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 55 HSDEAFDYGIAFQAKG 70
H+ +A+D G+ F+A G
Sbjct: 373 HAAQAYDVGVFFEANG 388
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 22.2 bits (45), Expect = 8.6
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 37 TKEYNLVPNDEFDTRIPLH-SDEAFDYGI 64
T +YN+ + FD +P+H SD +Y +
Sbjct: 984 TGQYNIHCDLSFDNLLPIHNSDLILNYSL 1012
>SPBC660.12c |||peptide epimerase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 392
Score = 22.2 bits (45), Expect = 8.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 23 VPMRLLKWRKKMTSTKEYNLV 43
+P+ L W K + K+YN+V
Sbjct: 169 MPVILFPWEKVVKLCKKYNIV 189
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 22.2 bits (45), Expect = 8.6
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 42 LVPNDEFDTRIPLHSD 57
+VP D ++ +P H+D
Sbjct: 126 IVPKDTYEFEVPYHAD 141
>SPAPB1A10.11c |||glutamyl-tRNA synthetase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 22.2 bits (45), Expect = 8.6
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 35 TSTKEYNLVPNDEFDTRIPLHSDEAFDYGIAFQAK 69
+STK + + +D D + L+ + F Y + F+ K
Sbjct: 149 SSTKYHEISIDDLTDAQRKLYKSKKFPYVVRFRMK 183
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.325 0.138 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,945
Number of Sequences: 5004
Number of extensions: 11905
Number of successful extensions: 37
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 12
length of query: 70
length of database: 2,362,478
effective HSP length: 50
effective length of query: 20
effective length of database: 2,112,278
effective search space: 42245560
effective search space used: 42245560
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)
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