GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000650-TA|BGIBMGA000650-PA|undefined
         (70 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001734-1|AAN71489.1|  698|Drosophila melanogaster RE71585p pro...    40   3e-04
AY075524-1|AAL68331.1|  698|Drosophila melanogaster RE71517p pro...    40   3e-04
AE014296-1687|AAF50246.2|  698|Drosophila melanogaster CG32048-P...    40   3e-04
BT001316-1|AAN71071.1|  690|Drosophila melanogaster AT15050p pro...    25   9.7  
AY051535-1|AAK92959.1|  576|Drosophila melanogaster GH18690p pro...    25   9.7  
AF115775-1|AAD29307.2|  686|Drosophila melanogaster Hsp90-relate...    25   9.7  
AE013599-183|AAF57362.1|  691|Drosophila melanogaster CG3152-PA ...    25   9.7  

>BT001734-1|AAN71489.1|  698|Drosophila melanogaster RE71585p
          protein.
          Length = 698

 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 20/36 (55%), Positives = 28/36 (77%), Gaps = 2/36 (5%)

Query: 34 MTSTKEYNLVPNDEFDTRIPLHSDEAFDYGIAFQAK 69
          M ST  Y+LV +D+ D R+PLH+++AF +GI FQAK
Sbjct: 1  MPSTP-YDLVQDDQ-DLRVPLHAEQAFFHGITFQAK 34


>AY075524-1|AAL68331.1|  698|Drosophila melanogaster RE71517p
          protein.
          Length = 698

 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 20/36 (55%), Positives = 28/36 (77%), Gaps = 2/36 (5%)

Query: 34 MTSTKEYNLVPNDEFDTRIPLHSDEAFDYGIAFQAK 69
          M ST  Y+LV +D+ D R+PLH+++AF +GI FQAK
Sbjct: 1  MPSTP-YDLVQDDQ-DLRVPLHAEQAFFHGITFQAK 34


>AE014296-1687|AAF50246.2|  698|Drosophila melanogaster
          CG32048-PA, isoform A protein.
          Length = 698

 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 20/36 (55%), Positives = 28/36 (77%), Gaps = 2/36 (5%)

Query: 34 MTSTKEYNLVPNDEFDTRIPLHSDEAFDYGIAFQAK 69
          M ST  Y+LV +D+ D R+PLH+++AF +GI FQAK
Sbjct: 1  MPSTP-YDLVQDDQ-DLRVPLHAEQAFFHGITFQAK 34


>BT001316-1|AAN71071.1|  690|Drosophila melanogaster AT15050p
           protein.
          Length = 690

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 28  LKWRKKMTSTKEYNLVPNDEFDTRIPLH 55
           L+W    + T E   VP+ E  TRI LH
Sbjct: 217 LRWSTDGSGTYEIEEVPDVELGTRIVLH 244


>AY051535-1|AAK92959.1|  576|Drosophila melanogaster GH18690p
           protein.
          Length = 576

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 8   TRYVRVILKARTWKRVPMRLLKWRKKMTSTKEY 40
           T YV    +   WKR   R L W  K   T+EY
Sbjct: 511 TTYVERKERYGKWKRAVERSLGWVIKQKKTREY 543


>AF115775-1|AAD29307.2|  686|Drosophila melanogaster Hsp90-related
           protein TRAP1 protein.
          Length = 686

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 28  LKWRKKMTSTKEYNLVPNDEFDTRIPLH 55
           L+W    + T E   VP+ E  TRI LH
Sbjct: 212 LRWSTDGSGTYEIEEVPDVELGTRIVLH 239


>AE013599-183|AAF57362.1|  691|Drosophila melanogaster CG3152-PA
           protein.
          Length = 691

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 28  LKWRKKMTSTKEYNLVPNDEFDTRIPLH 55
           L+W    + T E   VP+ E  TRI LH
Sbjct: 217 LRWSTDGSGTYEIEEVPDVELGTRIVLH 244


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.325    0.138    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,359,981
Number of Sequences: 52641
Number of extensions: 107211
Number of successful extensions: 228
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 221
Number of HSP's gapped (non-prelim): 7
length of query: 70
length of database: 24,830,863
effective HSP length: 50
effective length of query: 20
effective length of database: 22,198,813
effective search space: 443976260
effective search space used: 443976260
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 53 (25.4 bits)