GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000650-TA|BGIBMGA000650-PA|undefined
         (70 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   1.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   1.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   1.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   1.9  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    20   2.5  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 15  LKARTWKRVPMRLLKWRKKMTSTKEYNLVP 44
           LKA       + ++     + +TKEYN VP
Sbjct: 427 LKAIKENNADLTVVSGGSVLRATKEYNTVP 456


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 15  LKARTWKRVPMRLLKWRKKMTSTKEYNLVP 44
           LKA       + ++     + +TKEYN VP
Sbjct: 427 LKAIKENNADLTVVSGGSVLRATKEYNTVP 456


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 15  LKARTWKRVPMRLLKWRKKMTSTKEYNLVP 44
           LKA       + ++     + +TKEYN VP
Sbjct: 427 LKAIKENNADLTVVSGGSVLRATKEYNTVP 456


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 1.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 11  VRVILKARTWKRVPMRLLKWR 31
           V  IL  +  K VP  L+KW+
Sbjct: 246 VEQILAKKEIKGVPTYLIKWK 266


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 20.2 bits (40), Expect = 2.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 47  EFDTRIPLHSDEAFDY 62
           + D   PLH+D+A +Y
Sbjct: 244 DLDIGPPLHADQAEEY 259


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.138    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,514
Number of Sequences: 429
Number of extensions: 903
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 70
length of database: 140,377
effective HSP length: 45
effective length of query: 25
effective length of database: 121,072
effective search space:  3026800
effective search space used:  3026800
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.7 bits)
S2: 36 (18.6 bits)