Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000649-TA|BGIBMGA000649-PA|IPR008688|ATPase, F0 complex,
subunit B, mitochondrial, IPR013837|ATPase, F0 complex subunit B,
mitochondrial, metazoa
(136 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 26 2.4
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 25 3.1
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 25 4.1
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 25 4.1
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 5.5
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 24 7.2
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 24 9.5
SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33 |Schizo... 24 9.5
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 24 9.5
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 24 9.5
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 25.8 bits (54), Expect = 2.4
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 58 NVAMQLEAVYRERAM---RLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSITA 114
N ++LEA+ R+ + L + + L + + N LH + ILEN ++S+
Sbjct: 498 NQCLELEALNRKNDLIRGELDSLKEKNLVAQKQLKSANNTLHVRAKHIQILENTNQSLKK 557
Query: 115 DFQKQALNQAIKDLAL 130
+ + +K++AL
Sbjct: 558 NLENGRAEFRLKEIAL 573
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 25.4 bits (53), Expect = 3.1
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 14 DAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMR 73
D + E K + + + + +AQ +AE EA+K+N LE + E+A+
Sbjct: 28 DRFLQEERKKLLNNKNEYLRQLSEINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAIT 87
Query: 74 LYQM--VKGRLDYHVKKRR 90
++ + +LD +K+++
Sbjct: 88 EQEIFSFQEKLDAMLKRKQ 106
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 25.0 bits (52), Expect = 4.1
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 69 ERAMRLYQMVKGRLDYHVKKRRTENKLHQ---KWMIAW---ILENVHKSIT-ADFQKQAL 121
+R RL Q + L+Y EN+ HQ K W IL + IT DF+++
Sbjct: 273 DRKSRLLQCFESHLNYKAWHLEFENEAHQYEIKGYRLWLQNILNRENCQITKLDFEREFS 332
Query: 122 NQAIKDL 128
+KDL
Sbjct: 333 QLKLKDL 339
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 25.0 bits (52), Expect = 4.1
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 75 YQMVKGRLDYHV-KKRRTENKLHQKWM-IAWILENVHKSITADFQKQALNQAIKDLALAA 132
Y + L HV +K R E K ++ I ++E + +S F+KQ ++ A ++ LAA
Sbjct: 564 YTLKPPNLFQHVDEKLRLEKKEQLSYLEILKVIEQMLESNEQKFKKQIVSLASENAKLAA 623
Query: 133 SR 134
R
Sbjct: 624 QR 625
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 24.6 bits (51), Expect = 5.5
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 11 KEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRER 70
KE I ++++ +DQ V + K A D K +EAKK ++Q EA +++
Sbjct: 3123 KETSQGIDKFKEALSDQQNVLFSKTKTANDRLQCIIQTKQAVEAKKV-YSLQAEASLQKK 3181
Query: 71 AMRL 74
+ L
Sbjct: 3182 SFLL 3185
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 24.2 bits (50), Expect = 7.2
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 16 EIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLY 75
E A+ EK + KV ET D K+ Q + K EAK + VA +L+ R+ ++ Y
Sbjct: 33 EAAKEEKPAEE--KVAETENVDVKELQSKLSELKSKYEAKDKEVA-ELKGSIRQ-SLADY 88
Query: 76 QMVKGRLDYHVKKRR 90
+ ++ R+ +++ R
Sbjct: 89 RNLENRMKRDMEQTR 103
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 23.8 bits (49), Expect = 9.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 24 RADQMKVFETTIKDAKDAQWRAE 46
R DQ K F T++++ K+A RAE
Sbjct: 670 RFDQAKQFNTSLENFKNALERAE 692
>SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 23.8 bits (49), Expect = 9.5
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 77 MVKGRLDYHVKKRRTENKLHQKWMI 101
M+ G L YH+ +R+ + + WM+
Sbjct: 109 MLGGDLRYHISQRKFNESVIRIWMV 133
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 23.8 bits (49), Expect = 9.5
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 14 DAEIAEWEKGRADQMKVFETTIKDAKDAQWR 44
D + WEK R + M +FE K WR
Sbjct: 320 DLDCYVWEKTRVNYMLIFE--FNQRKSLNWR 348
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 23.8 bits (49), Expect = 9.5
Identities = 16/80 (20%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 21 EKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRL---YQM 77
E+ + D + +++ +KD + K L EA+K + L+ V R + R + +
Sbjct: 144 EQAKYDAEVLRYSSLGHSKDLSQMRDEAKSLYEARKSYFTVALQYVVRVTSFRSSIDFIV 203
Query: 78 VKGRLDYHVKKRRTENKLHQ 97
++ + ++ R ++LH+
Sbjct: 204 IESICKFSIETFRLTDRLHE 223
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.128 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,563
Number of Sequences: 5004
Number of extensions: 19215
Number of successful extensions: 73
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 70
Number of HSP's gapped (non-prelim): 10
length of query: 136
length of database: 2,362,478
effective HSP length: 66
effective length of query: 70
effective length of database: 2,032,214
effective search space: 142254980
effective search space used: 142254980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)
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