Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000649-TA|BGIBMGA000649-PA|IPR008688|ATPase, F0 complex,
subunit B, mitochondrial, IPR013837|ATPase, F0 complex subunit B,
mitochondrial, metazoa
(136 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 37 0.007
SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_58681| Best HMM Match : MAP65_ASE1 (HMM E-Value=3.3e-26) 32 0.19
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.19
SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14) 30 0.58
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 30 0.58
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 28 2.3
SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42) 28 2.3
SB_34534| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 27 4.1
SB_42047| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 27 5.4
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 27 5.4
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 27 7.2
SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075) 27 7.2
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 27 7.2
SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) 27 7.2
SB_7952| Best HMM Match : F5_F8_type_C (HMM E-Value=0.48) 27 7.2
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092) 27 7.2
SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) 26 9.5
SB_34581| Best HMM Match : Sas10_Utp3 (HMM E-Value=5.1) 26 9.5
SB_33521| Best HMM Match : Utp14 (HMM E-Value=0.48) 26 9.5
SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45) 26 9.5
SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19) 26 9.5
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 36.7 bits (81), Expect = 0.007
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 11 KEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRER 70
+E+D+ + + +K AD +K + I K+ + +KI IE ++ ++ + E+
Sbjct: 1006 EELDSRLEQLDKATADAIKQRDLEICTLKETIEDLKKEKIDIETHLQSSLTEMSSAEEEK 1065
Query: 71 AMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSITADFQK-QALNQAIKDLA 129
+ K L+ ++ +KL A L+ V+ S+ A + QA+N +++
Sbjct: 1066 NAEFEGLKKRLLELQAREAELTDKLAVAENTAKDLDEVNASLQARLSELQAVNNELEEKL 1125
Query: 130 LAASRV 135
+ SRV
Sbjct: 1126 MDLSRV 1131
>SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 32.7 bits (71), Expect = 0.11
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 31 FETTIKDAKDAQWRA-EGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKGRLDYHVKKR 89
F TT+ D+ +++ RA EG+ ++ + +++A +L +V ER Q+ +YH++K
Sbjct: 339 FNTTM-DSFESRLRAREGELVVAQRSYDDLAAKLRSVSTERNTLANQVQDLSKNYHLEKE 397
Query: 90 RTEN 93
R +N
Sbjct: 398 RADN 401
>SB_58681| Best HMM Match : MAP65_ASE1 (HMM E-Value=3.3e-26)
Length = 631
Score = 31.9 bits (69), Expect = 0.19
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 9 LDKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKE 57
L+KE+ EIA+WE+ Q V T + + QW E KI E K+
Sbjct: 380 LEKELRTEIAKWEEENEQQFMVHGTRYAEFMEQQW--ENLKIQKEQVKQ 426
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 31.9 bits (69), Expect = 0.19
Identities = 18/85 (21%), Positives = 42/85 (49%)
Query: 15 AEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRL 74
A+ ++ EK R + + + I+ ++ QW+ Q+ +E +++ + Q E + ++
Sbjct: 1708 AKRSKEEKEREKERRKQKLKIQQEQERQWKLLQQRRQLEHQRQQLQQQQETHMMRQELKR 1767
Query: 75 YQMVKGRLDYHVKKRRTENKLHQKW 99
Q KG KK+++ K +K+
Sbjct: 1768 TQQAKGLRMGEEKKKKSPQKAGKKF 1792
>SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1951
Score = 30.7 bits (66), Expect = 0.44
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 9 LDKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYR 68
++K+ ++ E +K + ++ E KD + ++ E QK +EAK N +QL +
Sbjct: 581 MEKKNKRKLRELQKAQKPLQELLEQHKKDLEQQRYEYEQQKEDLEAKLRNEQLQLLKSFE 640
Query: 69 ERAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSITADF--QKQALNQAI 125
+ K LD ++ +N+L+Q L+N H+ D +K+ LN+ +
Sbjct: 641 FEKRDTEKFYKNLLDN--REVEFQNELNQ-------LKNNHEKEICDITKEKERLNEQL 690
>SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14)
Length = 869
Score = 30.3 bits (65), Expect = 0.58
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 15 AEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRL 74
A + + EK + D + + T++++ A+W L+EA EN+ + + ++RA L
Sbjct: 488 AHVIDLEKQKLDAEREYVTSLRELSAAEWEKREALELVEA-AENILVGMLKKEKKRAEEL 546
Query: 75 YQMVKG 80
+ +G
Sbjct: 547 RTLPRG 552
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 30.3 bits (65), Expect = 0.58
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 31 FETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRE-RAMRLYQMVKGRLDYHVKKR 89
+E+TIK+ D+ E +K + +K ++ E +E RA+ + K R + H +KR
Sbjct: 540 YESTIKELNDSIMELENRKATLTSKLNSITKDCEESKKESRALSICLEEKTR-NLHEEKR 598
Query: 90 RTE 92
R E
Sbjct: 599 RKE 601
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 29.5 bits (63), Expect = 1.0
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 18 AEWEKGRADQMKVFETTIKDA-KDAQWRA----EGQKILIEAKKENV--AMQLEAV---Y 67
AE EK + ++K +T+++ +D + + E +++L EA+ +N ++QL+ Y
Sbjct: 833 AELEK-KTSELKELSSTMREMHQDMKTSSASIVELEQLLQEARTQNDRHSVQLQTTDHAY 891
Query: 68 RERAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSITADFQKQALN-QAIK 126
+E L Q K + K RRTE +L + L+N + DFQ + ++
Sbjct: 892 KETKASLSQQTKRNGELEEKLRRTEEELKDRDGQVAKLDNELTKLQNDFQDTITQLKTLE 951
Query: 127 DLALAASRV 135
DL + RV
Sbjct: 952 DLLDTSKRV 960
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 28.3 bits (60), Expect = 2.3
Identities = 26/115 (22%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 22 KGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKGR 81
+G +D +K + +K+ A E QK+ + +EN + L + E+ ++ +
Sbjct: 1030 QGHSDSIKRLQEELKERNSAHQELE-QKM--QDLRENFSADLSEL--EQNFKIIEEENSA 1084
Query: 82 LDYHVKKRRTENKLHQKWMIAWILENVHKSITADFQKQALNQAIKDLALAASRVK 136
L +V+ +E +L K + E++ + + D Q+ ++ IKD AL R++
Sbjct: 1085 LKLNVEALESELQLSVKEKLE--NEHILRGLREDLQEAMSDKQIKDRALHDLRIE 1137
>SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42)
Length = 952
Score = 28.3 bits (60), Expect = 2.3
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 1 MAPGIGASLDKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRA-EGQKILIEAKKENV 59
++ + SLDK + I++ G MKV + +A + +W + QKI+I KENV
Sbjct: 399 LSDNMDVSLDKSMTRSISQHGLGLEGWMKVPSVIVNNAWEKKWLVLKEQKIMI-FDKENV 457
>SB_34534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 27.9 bits (59), Expect = 3.1
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAM--QLEAVY 67
D E+ +I + E +A +++ ET I A +R E + K + V M Q ++
Sbjct: 29 DLEIWVDIEKCESNQAPRLRTSETGIISAPSETFRFEE-----DDKTDGVRMIAQTPSIP 83
Query: 68 RERAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIA 102
+L + RL Y+ KRR E ++++W +A
Sbjct: 84 VNSPGKLVPNGR-RLHYNPVKRREETFINRRWRLA 117
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 27.9 bits (59), Expect = 3.1
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRE 69
+K D E AE E+ + ++ K E + K+ + ++EG+K E+K E + A +
Sbjct: 637 EKPKDEE-AEKEEDKKEEKKEEEKKPDEKKEDESKSEGKKEGDESKSEGKKEEPTADKDK 695
Query: 70 RAMRL--YQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSITADFQKQALNQAIKD 127
+A + + K R D R +N L I + + ++ + +A + I +
Sbjct: 696 KAEKADGKEAPKARDDAKAANERAKNALESH--IFGVRDEMNSELGEKLSTEAERETISE 753
Query: 128 LALAAS 133
AAS
Sbjct: 754 ALTAAS 759
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 27.5 bits (58), Expect = 4.1
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 14 DAEIAEWEKGRAD-QMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAM 72
D + E EK D +++ E + D + + RAE + + M+++++ ER
Sbjct: 1527 DRDKFEMEKTSLDNRLREVEDDLIDKQKQKERAETDLGEANKRISTLEMEIKSLQTERDN 1586
Query: 73 RLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILEN--VHKSITADFQKQA 120
LY+ DY ++RT+N+ ++ +LEN + I A +K A
Sbjct: 1587 ALYERDLNNKDY--IQQRTDNQTLRQENETVLLENKDLKAQIAAGLKKMA 1634
>SB_42047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 715
Score = 27.1 bits (57), Expect = 5.4
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 47 GQKILIEAKKENVAMQLEA-VYRERAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWIL 105
G + I A K + +++ V+ + LY++++ RL+ H KK R +M L
Sbjct: 408 GPTVTILASKTSQRYRIQCDVFEGMWLVLYELIR-RLEAHYKKVRDNVSFRASFMGPLPL 466
Query: 106 ENVHKSITADFQKQALNQAIKDL 128
+ ++ I F+++ +DL
Sbjct: 467 QEYYELIDTHFEQRQNQAKYRDL 489
>SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 27.1 bits (57), Expect = 5.4
Identities = 28/125 (22%), Positives = 65/125 (52%), Gaps = 12/125 (9%)
Query: 9 LDKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRA-EGQKIL--IEAKKENVAMQLEA 65
LD+E+ A+ E G+ ++ K ++ + + + E +K + +E + E + +++
Sbjct: 133 LDQEL-ADANEAYVGKIEEFKEVHKAVEQLRTSGFSTGEIKKDIANMEEEHEQLKKRIDR 191
Query: 66 VYRE-RAMRLY-QMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSITADFQKQALNQ 123
+ ++ ++R Y QM+ + V++ + ++ QK LE ++ + AD + Q +NQ
Sbjct: 192 MQKKVESVRNYEQMLLAARNLRVEREKEQSLAQQK------LEQKNQLLHADQRFQRMNQ 245
Query: 124 AIKDL 128
+KDL
Sbjct: 246 QLKDL 250
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 27.1 bits (57), Expect = 5.4
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 5 IGASLDKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLE 64
+ SL KE + E + + K E+ I DA++ ++G ++AK ++ E
Sbjct: 502 LSISLKKEFS--VTEENERLLREKKALESRILDAEEQVSSSKGMITALQAKLDDALNSRE 559
Query: 65 AVYRERAMRLYQMVKGRLDYHVKKRRTENKLHQK 98
A + R+Y++ + D K + E+ L ++
Sbjct: 560 AKSDWDSNRIYELEEKIKDLSKKLKDVESDLAER 593
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 27.1 bits (57), Expect = 5.4
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 14 DAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEAVYRERAM 72
+ E+AE EK R ++ + E + ++A+ +AE +K E A+ E +L+ +E
Sbjct: 233 EKELAELEKKRQEERRRQEEKRRAEEEAKRKAEEEKAAREKAEMEEKLRRLKLQEKEEKR 292
Query: 73 RLYQMVKGRLDYHVKKRRTENKLHQK 98
+L K + ++R K +K
Sbjct: 293 KLEAEKKEKERVEREQREERRKQEEK 318
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 27.1 bits (57), Expect = 5.4
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 23 GRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQ---MVK 79
GR D V E I + + R + +E +K+ + +LEAV E+A+ +Q +K
Sbjct: 637 GRTDGFNVSEALIARVGELESRLQR----VEQEKKLLETRLEAVMMEKALAAFQSARAIK 692
Query: 80 GRLDYHVKKRR 90
G D ++ R
Sbjct: 693 GMRDSQLESAR 703
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 37 DAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKGRLDYHVKKRRTENK 94
+ +D Q R E ++I EA++E +Q E YRE+ ++ + + +L ++RR + +
Sbjct: 1246 EEEDEQRRLEEEQIR-EAEEELRRLQEEREYREQMRKIAEARERKLQEEEEERRRQEE 1302
Score = 26.2 bits (55), Expect = 9.5
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 2 APGIGASLDKEVDAEIA-EWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVA 60
+P + +D E+ A I E E R V + + +WR + + ++AK+ N
Sbjct: 1015 SPDMIEHMDDELKAFIQQERELFRTPDRPVSRQQCRRWRWLKWR-QRCLLAVQAKEAN-- 1071
Query: 61 MQLEAVYRERAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSITADFQKQA 120
EA E+A R Q + R + KKR+ E K + + + E + A Q +A
Sbjct: 1072 ---EAGAGEKACRCAQSREKRKEQE-KKRKEEEKRIRDEELRLLKEREEEQALARAQAEA 1127
Query: 121 LNQAIKD 127
QAI++
Sbjct: 1128 KQQAIEE 1134
>SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)
Length = 762
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 2 APGIGASLDKEV---DAEIAEWEKGRADQMKVFETTIKD 37
A + + LD+E+ +AEIA W+K K +E T+K+
Sbjct: 364 AEEVKSELDQELAKHEAEIATWKKRAQALKKKYEATLKE 402
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 26.6 bits (56), Expect = 7.2
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 11 KEVDAEIAEWEKGR--ADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYR 68
+E + AE E+ R AD+++ IK ++ + R + Q++ E KK + EA
Sbjct: 200 REAEKRKAEEEEARRKADELE----KIKRQQEDEERLKNQRLDEERKKLE---EEEANLM 252
Query: 69 ERAMRLYQMVKGRLDYHVKKRRTENKLHQKW 99
E + + + + + +KRR E + QKW
Sbjct: 253 EEERKRKEEAEKKREEEERKRREEEEAAQKW 283
>SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081)
Length = 524
Score = 26.6 bits (56), Expect = 7.2
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 39 KDAQWRAEGQKIL--IEAKKENVAMQLEAVYRERAMR--LYQMVKGRLDYHVKKRRTENK 94
+D W E QK IE +K A + + R+R R Q V R D H++K+R+E+
Sbjct: 145 RDEFWTQEQQKEKERIEEEKNRAAAHQQELERKRKEREEKQQEVDERED-HLQKKRSESL 203
Query: 95 LHQKWMIAWILENVHKSITADFQKQ 119
++ A L K FQ+Q
Sbjct: 204 RKERMKEAEALIAQGKEQKPSFQEQ 228
>SB_7952| Best HMM Match : F5_F8_type_C (HMM E-Value=0.48)
Length = 117
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 39 KDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVK 79
KD++WR++GQ + ++ ++L Y +R+YQ ++
Sbjct: 12 KDSEWRSKGQGV-----GASINIELRGTYLVNMVRIYQRIE 47
>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
Length = 1146
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 62 QLEAVYRERAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSITADFQKQAL 121
QL+ R + + Q + R+ H ++ + + +LHQ+ + + +H+ Q+Q L
Sbjct: 693 QLQHQQRIQQQQRLQQQQQRIQLHQEQLKQQQQLHQEQLKQQQQQQLHREQLKQKQQQQL 752
Query: 122 NQ 123
+Q
Sbjct: 753 HQ 754
>SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)
Length = 599
Score = 26.2 bits (55), Expect = 9.5
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 19 EWEKGRADQMKVFETTIKDAKDAQWRAEG---QKILIEAKKENVA------MQLEAVYRE 69
E EK R D + K+ ++A+ RAE Q+ +EA++ A Q + RE
Sbjct: 105 ELEKRRQDLQDKLKRE-KEEREAKERAEEERRQRAKMEAEQRRQAELEKQRQQQMEMERE 163
Query: 70 RAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWIL--ENVHKSITADFQKQALNQAIKD 127
+ + QM++ RL ++ R K QK + +L + + + I + KQ L + ++
Sbjct: 164 QEVLRKQMIQQRLQAQIEAERQRQKEWQKRKVEELLNQKGLEQDIVNNL-KQRLKKLEEE 222
Query: 128 LALAASR 134
LA +
Sbjct: 223 LATVVGK 229
>SB_34581| Best HMM Match : Sas10_Utp3 (HMM E-Value=5.1)
Length = 316
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 35 IKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMR 73
+KD K Q +A+ Q + +AKK+ A Q+ V RE A+R
Sbjct: 268 LKDRKQVQ-KADRQ-VSEKAKKKRQATQMRRVRREEALR 304
>SB_33521| Best HMM Match : Utp14 (HMM E-Value=0.48)
Length = 947
Score = 26.2 bits (55), Expect = 9.5
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 7 ASLDKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAV 66
A ++K DA+ + Q KV ET+IK + + R + +K I + + ++ A+
Sbjct: 479 AKVNKSQDAKETSKRRKPRSQQKVSETSIKIVHNLKKRKDKRKGKISKNQLDASL---AI 535
Query: 67 YRERAMRLYQMVKGRLDYHVKK 88
R RL +M+K R + +K
Sbjct: 536 LRRLQERL-RMIKMRTMHRAEK 556
>SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45)
Length = 671
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/74 (18%), Positives = 32/74 (43%)
Query: 19 EWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMV 78
EW+ +T + +Q + G AKK++++++ + Y R +
Sbjct: 279 EWKWNSKSPATTENSTFHSSSSSQLTSRGGSEEGYAKKDSLSLESTSKYGNGLQRSSSLT 338
Query: 79 KGRLDYHVKKRRTE 92
KG+ ++V +T+
Sbjct: 339 KGKWSWNVTTPKTD 352
>SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19)
Length = 2253
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 32 ETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKGRLDYHVKKRRT 91
E T+ A +A AE K IE K+ +++ A+ + R YQ + D + R+T
Sbjct: 520 ELTLDTAINAVRAAETSKTQIENLKDGASLETAALNKRGTARRYQKQHNQRDPKREGRKT 579
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.128 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,933,502
Number of Sequences: 59808
Number of extensions: 137295
Number of successful extensions: 405
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 389
Number of HSP's gapped (non-prelim): 35
length of query: 136
length of database: 16,821,457
effective HSP length: 75
effective length of query: 61
effective length of database: 12,335,857
effective search space: 752487277
effective search space used: 752487277
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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