Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000649-TA|BGIBMGA000649-PA|IPR008688|ATPase, F0 complex,
subunit B, mitochondrial, IPR013837|ATPase, F0 complex subunit B,
mitochondrial, metazoa
(136 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 44 4e-05
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 40 6e-04
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 31 0.22
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 31 0.22
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 30 0.50
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 30 0.50
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 30 0.50
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 30 0.50
Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical pr... 29 0.88
Z82084-3|CAB04977.1| 780|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 1.5
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 1.5
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 28 2.7
U80437-8|AAB37623.1| 630|Caenorhabditis elegans Exocyst compone... 28 2.7
U40956-2|AAA81757.2| 131|Caenorhabditis elegans Hypothetical pr... 28 2.7
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 28 2.7
U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical pr... 27 3.6
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 3.6
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 3.6
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 3.6
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 3.6
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 27 3.6
AF098995-6|AAC67480.1| 311|Caenorhabditis elegans F-box b prote... 27 3.6
AC006641-1|AAF39824.2| 376|Caenorhabditis elegans Hypothetical ... 27 3.6
Z81534-5|CAB04348.2| 694|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z47074-2|CAA87377.2| 694|Caenorhabditis elegans Hypothetical pr... 27 4.7
AL117202-20|CAB57898.3| 1261|Caenorhabditis elegans Hypothetical... 27 4.7
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 27 6.2
U64855-1|AAB04980.1| 594|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 27 6.2
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 26 8.2
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 26 8.2
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 26 8.2
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 26 8.2
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 26 8.2
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 26 8.2
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 26 8.2
AF036706-12|AAK39280.1| 343|Caenorhabditis elegans Hypothetical... 26 8.2
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 56 KENVAMQLEAVYRERAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSIT-A 114
K+++ +QLEA YR+ + +K R++Y + T+ + + ++ I ++V K ++
Sbjct: 223 KDSMQLQLEAAYRKNVQTISNEIKRRIEYLKETEETKARFERDQLLKLINDSVEKQVSQK 282
Query: 115 DFQKQALNQAIKDL 128
DFQ++ L AI+ L
Sbjct: 283 DFQEKFLQNAIQQL 296
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 39.9 bits (89), Expect = 6e-04
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 54 AKKENVAMQLEAVYRERAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSIT 113
A KE++A+QLEA YR+ + +K R+DY + ++ ++ ++ ++ I V K +
Sbjct: 223 ALKESMALQLEATYRKNVQSVATELKRRIDYLKETEESKARVEREQLLKLINSEVDKEFS 282
Query: 114 -ADFQKQALNQAIKDL 128
F+ + L AI+ L
Sbjct: 283 DRSFKDKYLQNAIQQL 298
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 31.5 bits (68), Expect = 0.22
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 26 DQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKGRLDYH 85
+++K TT+ D + EG+ +L+E + E++ Q+ E MR Y+ D
Sbjct: 326 EEVKRLRTTLGDMRGKMADLEGRNLLLEKQIEDLNYQM-----EEDMRSYEQSLNDKDTS 380
Query: 86 VKKRRTENKL 95
+ K R E+K+
Sbjct: 381 INKLRDESKI 390
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 31.5 bits (68), Expect = 0.22
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 26 DQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKGRLDYH 85
+++K TT+ D + EG+ +L+E + E++ Q+ E MR Y+ D
Sbjct: 309 EEVKRLRTTLGDMRGKMADLEGRNLLLEKQIEDLNYQM-----EEDMRSYEQSLNDKDTS 363
Query: 86 VKKRRTENKL 95
+ K R E+K+
Sbjct: 364 INKLRDESKI 373
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 22 KGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVK 79
+GR D++K+ ET ++D+K +AE +K E ++ A++ + R A ++ + ++
Sbjct: 737 RGREDRIKILETALRDSKQRS-QAERKKYQQEVERIKEAVRQRNMRRMNAPQIVKPIR 793
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 22 KGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVK 79
+GR D++K+ ET ++D+K +AE +K E ++ A++ + R A ++ + ++
Sbjct: 737 RGREDRIKILETALRDSKQRS-QAERKKYQQEVERIKEAVRQRNMRRMNAPQIVKPIR 793
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 30.3 bits (65), Expect = 0.50
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 21 EKGRADQMKVFETTIKDAKDAQW---RAEGQKILIEAKKENVAMQLEAVYRERAMRLYQM 77
+K A+++K E +K K+ Q R E +K KKE Q E +ER R +
Sbjct: 962 KKEEAERLKKLEEKLKKEKEKQAEKDRIEAKKFEERMKKEQ-EKQEEKERKEREKREEKE 1020
Query: 78 VKGRLDYHV---KKRRTENKLHQKWMIAWILENVHKSITAD 115
K R + KKR ++++ K IA LEN K A+
Sbjct: 1021 RKEREIREIMERKKREEDDRIAAKLQIAQQLENDRKMREAE 1061
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 22 KGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVK 79
+GR D++K+ ET ++D+K +AE +K E ++ A++ + R A ++ + ++
Sbjct: 737 RGREDRIKILETALRDSKQRS-QAERKKYQQEVERIKEAVRQRNMRRMNAPQIVKPIR 793
>Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical
protein ZK822.1 protein.
Length = 913
Score = 29.5 bits (63), Expect = 0.88
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 8 SLDKEVDAEIAEWEKGRADQMKVFETTIKDAK----DAQWRAEGQKILIEAKKENVAMQL 63
+LD+ ++ W K +++++FE +++AK A A + +N +L
Sbjct: 401 TLDERMEKSATSWIKKIEERLRIFENQMQNAKLEAATAHQMALNSSCHEKDAHQNCLEKL 460
Query: 64 EAVYRERAMRLY-QMVKGRLDYHVKKRRTEN 93
E++ RE ++ +V+ +D KRR EN
Sbjct: 461 ESLQREHMRVIHSSLVEIGVDEINMKRRLEN 491
>Z82084-3|CAB04977.1| 780|Caenorhabditis elegans Hypothetical
protein ZK1053.3 protein.
Length = 780
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 36 KDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQM 77
KD +D W AE +K+L E + + QLE+ R+R L ++
Sbjct: 273 KDTQDEFWEAESEKVL-ELQPLMIDPQLESTSRQRLKILQEL 313
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.7 bits (61), Expect = 1.5
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 5 IGASLDKEVDAEIAEWEKG-RADQMKV--FETTIKDAKDAQWRAEGQKILIEAKKENVAM 61
+G L+ E A +A+ +KG + D+ +V + D KDA+ RA+ + +A+ + +
Sbjct: 1106 LGMKLEDE-QAAVAKLQKGIQQDEARVKDLHDQLADEKDARQRADRSRADQQAEYDELTE 1164
Query: 62 QLEAVYRERAMRL 74
QLE R A ++
Sbjct: 1165 QLEDQARATAAQI 1177
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.7 bits (61), Expect = 1.5
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 5 IGASLDKEVDAEIAEWEKG-RADQMKV--FETTIKDAKDAQWRAEGQKILIEAKKENVAM 61
+G L+ E A +A+ +KG + D+ +V + D KDA+ RA+ + +A+ + +
Sbjct: 1106 LGMKLEDE-QAAVAKLQKGIQQDEARVKDLHDQLADEKDARQRADRSRADQQAEYDELTE 1164
Query: 62 QLEAVYRERAMRL 74
QLE R A ++
Sbjct: 1165 QLEDQARATAAQI 1177
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 28.7 bits (61), Expect = 1.5
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 5 IGASLDKEVDAEIAEWEKG-RADQMKV--FETTIKDAKDAQWRAEGQKILIEAKKENVAM 61
+G L+ E A +A+ +KG + D+ +V + D KDA+ RA+ + +A+ + +
Sbjct: 1106 LGMKLEDE-QAAVAKLQKGIQQDEARVKDLHDQLADEKDARQRADRSRADQQAEYDELTE 1164
Query: 62 QLEAVYRERAMRL 74
QLE R A ++
Sbjct: 1165 QLEDQARATAAQI 1177
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical protein
C48B4.4c protein.
Length = 1704
Score = 27.9 bits (59), Expect = 2.7
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 58 NVAMQLEAVYRERAMRLYQMVKGRLDYHVKKRRTENK-LHQKWMIAWILENVHKSITADF 116
N M L + + Q+V+ RL V K + NK L+ KW I E+ +
Sbjct: 1597 NYTMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFEMV 1656
Query: 117 QKQALNQAIKDLALAASRVK 136
Q A + +KD LA S ++
Sbjct: 1657 QALAKDLGVKDFILAQSSLE 1676
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical protein
C48B4.4b protein.
Length = 1691
Score = 27.9 bits (59), Expect = 2.7
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 58 NVAMQLEAVYRERAMRLYQMVKGRLDYHVKKRRTENK-LHQKWMIAWILENVHKSITADF 116
N M L + + Q+V+ RL V K + NK L+ KW I E+ +
Sbjct: 1584 NYTMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFEMV 1643
Query: 117 QKQALNQAIKDLALAASRVK 136
Q A + +KD LA S ++
Sbjct: 1644 QALAKDLGVKDFILAQSSLE 1663
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical protein
C48B4.4a protein.
Length = 1689
Score = 27.9 bits (59), Expect = 2.7
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 58 NVAMQLEAVYRERAMRLYQMVKGRLDYHVKKRRTENK-LHQKWMIAWILENVHKSITADF 116
N M L + + Q+V+ RL V K + NK L+ KW I E+ +
Sbjct: 1582 NYTMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFEMV 1641
Query: 117 QKQALNQAIKDLALAASRVK 136
Q A + +KD LA S ++
Sbjct: 1642 QALAKDLGVKDFILAQSSLE 1661
>U80437-8|AAB37623.1| 630|Caenorhabditis elegans Exocyst
component protein 7 protein.
Length = 630
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 25 ADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKGRLDY 84
+DQ K A++ +W QK + AK + +E V + RL + K L
Sbjct: 24 SDQNAAESIAKKLAQEEEWLQNFQKNI--AKSAQIRQGIEQVVEKFDQRLSSLEKNVLPM 81
Query: 85 HVKKRRTENKLH 96
H+ + + K H
Sbjct: 82 HISNGKLQKKQH 93
>U40956-2|AAA81757.2| 131|Caenorhabditis elegans Hypothetical
protein ZK402.3 protein.
Length = 131
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 25 ADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEAVYRERAMRLYQMVKGRLD 83
AD +++ ++ K+A K+ +E KKEN A YR+ +L + +
Sbjct: 37 ADDVRLMTFLVEKTKEANEPLVATKVFMEFGKKENARCSDGAYYRKFHKKLAPNMDQLDN 96
Query: 84 YHVKKRRTENK 94
Y ++ R EN+
Sbjct: 97 YSIESRVRENR 107
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 27.9 bits (59), Expect = 2.7
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 58 NVAMQLEAVYRERAMRLYQMVKGRLDYHVKKRRTENK-LHQKWMIAWILENVHKSITADF 116
N M L + + Q+V+ RL V K + NK L+ KW I E+ +
Sbjct: 1597 NYTMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFEMV 1656
Query: 117 QKQALNQAIKDLALAASRVK 136
Q A + +KD LA S ++
Sbjct: 1657 QALAKDLGVKDFILAQSSLE 1676
>U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical
protein C09B9.3 protein.
Length = 884
Score = 27.5 bits (58), Expect = 3.6
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 8 SLDKEVDAEIAEWEKGRADQMKVFETTIKDAK----DAQWRAEGQKILIE---AKKENVA 60
S++KE D +K +Q K ++ ++ K DA E QK L + AKKE
Sbjct: 469 SVEKESDKNTKNKKKSSGEQNKTVKSGAENMKILKPDAVKYVEKQKELEKLNAAKKEEER 528
Query: 61 MQLEAVYRERAMRL 74
M+LE + ER +L
Sbjct: 529 MELEKLDAERKNKL 542
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.5 bits (58), Expect = 3.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 21 EKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKG 80
EK R + K+ E D A+W E ++ E+ K +L+ ER +L +VK
Sbjct: 856 EKMRKELEKLNEQN--DGDRAEWSNERNRL--ESSKNEAVTELQ----ERVQKLEDVVKE 907
Query: 81 RLDYHVKKRRTENKLHQK 98
+ D + RR H+K
Sbjct: 908 KEDKEIALRRDLEDSHEK 925
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.5 bits (58), Expect = 3.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 21 EKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKG 80
EK R + K+ E D A+W E ++ E+ K +L+ ER +L +VK
Sbjct: 856 EKMRKELEKLNEQN--DGDRAEWSNERNRL--ESSKNEAVTELQ----ERVQKLEDVVKE 907
Query: 81 RLDYHVKKRRTENKLHQK 98
+ D + RR H+K
Sbjct: 908 KEDKEIALRRDLEDSHEK 925
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.5 bits (58), Expect = 3.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 21 EKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKG 80
EK R + K+ E D A+W E ++ E+ K +L+ ER +L +VK
Sbjct: 616 EKMRKELEKLNEQN--DGDRAEWSNERNRL--ESSKNEAVTELQ----ERVQKLEDVVKE 667
Query: 81 RLDYHVKKRRTENKLHQK 98
+ D + RR H+K
Sbjct: 668 KEDKEIALRRDLEDSHEK 685
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.5 bits (58), Expect = 3.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 21 EKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKG 80
EK R + K+ E D A+W E ++ E+ K +L+ ER +L +VK
Sbjct: 856 EKMRKELEKLNEQN--DGDRAEWSNERNRL--ESSKNEAVTELQ----ERVQKLEDVVKE 907
Query: 81 RLDYHVKKRRTENKLHQK 98
+ D + RR H+K
Sbjct: 908 KEDKEIALRRDLEDSHEK 925
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
defective protein 45 protein.
Length = 1076
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 21 EKGRADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENV-AMQLEAVYRE 69
E RA++MK + K+++ + +AE +I + K++ + MQ A+Y+E
Sbjct: 613 EAARAEEMKRLDEQNKESERKRKQAEQDEIQKKIKQDQLYKMQQNAIYQE 662
>AF098995-6|AAC67480.1| 311|Caenorhabditis elegans F-box b protein
protein 26 protein.
Length = 311
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 55 KKENVAMQLEAVYRERAMRLYQMVKGRLDYHVKKRRTENKLHQK 98
K + VA+ E++ RER LY+++K H++ ++ + +Q+
Sbjct: 120 KNQGVALIFESIMRERFYELYEIIKNIKIVHLEPFSSQIQDYQR 163
>AC006641-1|AAF39824.2| 376|Caenorhabditis elegans Hypothetical
protein F45D11.10 protein.
Length = 376
Score = 27.5 bits (58), Expect = 3.6
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 67 YRERAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSITADFQKQALNQAIK 126
YRE + LY+ V G + VK R E K + + W L NV I + Q +
Sbjct: 157 YREALIYLYEKVLGNRNLPVKVNRMEFKNYFSRQV-WDLRNVKLRIKKLEVHNEIKQVLS 215
Query: 127 DLA 129
LA
Sbjct: 216 TLA 218
>Z81534-5|CAB04348.2| 694|Caenorhabditis elegans Hypothetical
protein F37H8.2 protein.
Length = 694
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 68 RERAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSI 112
+ RA Y++ DY +K ++T N L + I+ +LEN+ K +
Sbjct: 652 KSRAKTAYEIA----DYQLKLKQTSNALQELDAISGVLENMKKRL 692
>Z47074-2|CAA87377.2| 694|Caenorhabditis elegans Hypothetical
protein F37H8.2 protein.
Length = 694
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 68 RERAMRLYQMVKGRLDYHVKKRRTENKLHQKWMIAWILENVHKSI 112
+ RA Y++ DY +K ++T N L + I+ +LEN+ K +
Sbjct: 652 KSRAKTAYEIA----DYQLKLKQTSNALQELDAISGVLENMKKRL 692
>AL117202-20|CAB57898.3| 1261|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1261
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 24 RADQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAMQLEAVYRERA 71
R+ + +++ T K+A + + + QK+ + K NV QL V E A
Sbjct: 222 RSVEYTMYDNTNKEAIKEKTKLDEQKVELNQKDNNVKSQLNDVIAEMA 269
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 26.6 bits (56), Expect = 6.2
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 38 AKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKGRLDYHVKKRRTENKL 95
A++AQ+RAE +EAKK+ V L+ + E M L + + +KK KL
Sbjct: 268 AEEAQFRAEELSCDLEAKKDEVHNILQQL-NESRMTLRSEQRSLEEADIKKENLTAKL 324
>U64855-1|AAB04980.1| 594|Caenorhabditis elegans Hypothetical
protein ZK742.2 protein.
Length = 594
Score = 26.6 bits (56), Expect = 6.2
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 6 GASLDKEVDAEIAEWEKGRA----DQMKVFETTIKDAKDAQWRAEGQKILIEAKKENVAM 61
G L E I WEK + +MK T+K K + +KI E K++ +
Sbjct: 130 GNELKVEAITVIKSWEKEKCVKNDARMKCLVVTLKKTKFVDYENGAKKIEAERKRKKILE 189
Query: 62 QLEAVYRERAMRLY 75
+ + E ++ +Y
Sbjct: 190 ERKMKMIENSVNVY 203
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 26.6 bits (56), Expect = 6.2
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 38 AKDAQWRAEGQKILIEAKKENVAMQLEAVYRERAMRLYQMVKGRLDYHVKKRRTENKL 95
A++AQ+RAE +EAKK+ V L+ + E M L + + +KK KL
Sbjct: 268 AEEAQFRAEELSCDLEAKKDEVHNILQQL-NESRMTLRSEQRSLEEADIKKENLTAKL 324
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEA-VY 67
+++V+A+ A ++ R + + + ++ + QW+AE ++I E KKE +L+A
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKK 148
Query: 68 RERAMR 73
+E+A++
Sbjct: 149 KEKAVK 154
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEA-VY 67
+++V+A+ A ++ R + + + ++ + QW+AE ++I E KKE +L+A
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKK 148
Query: 68 RERAMR 73
+E+A++
Sbjct: 149 KEKAVK 154
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEA-VY 67
+++V+A+ A ++ R + + + ++ + QW+AE ++I E KKE +L+A
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKK 148
Query: 68 RERAMR 73
+E+A++
Sbjct: 149 KEKAVK 154
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEA-VY 67
+++V+A+ A ++ R + + + ++ + QW+AE ++I E KKE +L+A
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKK 148
Query: 68 RERAMR 73
+E+A++
Sbjct: 149 KEKAVK 154
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEA-VY 67
+++V+A+ A ++ R + + + ++ + QW+AE ++I E KKE +L+A
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKK 148
Query: 68 RERAMR 73
+E+A++
Sbjct: 149 KEKAVK 154
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEA-VY 67
+++V+A+ A ++ R + + + ++ + QW+AE ++I E KKE +L+A
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKK 148
Query: 68 RERAMR 73
+E+A++
Sbjct: 149 KEKAVK 154
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEA-VY 67
+++V+A+ A ++ R + + + ++ + QW+AE ++I E KKE +L+A
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKK 148
Query: 68 RERAMR 73
+E+A++
Sbjct: 149 KEKAVK 154
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEA-VY 67
+++V+A+ A ++ R + + + ++ + QW+AE ++I E KKE +L+A
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKK 148
Query: 68 RERAMR 73
+E+A++
Sbjct: 149 KEKAVK 154
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEA-VY 67
+++V+A+ A ++ R + + + ++ + QW+AE ++I E KKE +L+A
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKK 148
Query: 68 RERAMR 73
+E+A++
Sbjct: 149 KEKAVK 154
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 DKEVDAEIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKILIE-AKKENVAMQLEA-VY 67
+++V+A+ A ++ R + + + ++ + QW+AE ++I E KKE +L+A
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKK 148
Query: 68 RERAMR 73
+E+A++
Sbjct: 149 KEKAVK 154
>AF036706-12|AAK39280.1| 343|Caenorhabditis elegans Hypothetical
protein T07A9.8 protein.
Length = 343
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 16 EIAEWEKGRADQMKVFETTIKDAKDAQWRAEGQKI 50
EI W + + DQ VF+ +AK A+ E KI
Sbjct: 186 EIIRWLQSKPDQQSVFDLGCGEAKIAEAVGEKHKI 220
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.128 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,906,889
Number of Sequences: 27539
Number of extensions: 101781
Number of successful extensions: 424
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 402
Number of HSP's gapped (non-prelim): 64
length of query: 136
length of database: 12,573,161
effective HSP length: 74
effective length of query: 62
effective length of database: 10,535,275
effective search space: 653187050
effective search space used: 653187050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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