Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000648-TA|BGIBMGA000648-PA|IPR001223|Glycoside
hydrolase, family 18, catalytic domain, IPR011583|Chitinase II
(393 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 2e-27
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 104 1e-22
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 1e-22
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 93 3e-19
SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 60 2e-09
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 50 4e-06
SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32) 39 0.006
SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_32997| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 120 bits (289), Expect = 2e-27
Identities = 116/401 (28%), Positives = 182/401 (45%), Gaps = 75/401 (18%)
Query: 2 LPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTV 61
LP D+DP L CTH++Y +A I P T K+ + N DR Y+ I LK K P L
Sbjct: 418 LPKDIDPLL--CTHIVYAFAKIDPATNKIGTYEWN--DDRL---YKEINDLKLKNPSLKT 470
Query: 62 LLSVGGDADTEEP-EKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKI 120
LL+VGG P ++ ++ S+ RT FI+S + L+++Y FDG DL W++P +
Sbjct: 471 LLAVGGWNHESGPVSPFSQMVASKSNRTTFISSLLQLSDKYDFDGFDLDWEYPASR---- 526
Query: 121 RSTWGSLWHGIKKTFGTTPVDEKESEHREGFTALVREL------KQALIHKPKMQLGVTV 174
G +P +K+ FT L E+ K A KP+M L V
Sbjct: 527 ---------------GNSPPQDKQH-----FTILCEEMLDAFKRKAADTDKPRMLLTAAV 566
Query: 175 -LPYVNSTIYHDVPAIINLVDYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADA 233
+ ++V + ++D++N+ YD + +TA + P ++
Sbjct: 567 SAGHGTVDAAYEVHKLAGILDWINLMTYDLH-GPWEPYTGHHTALVGPPGDK---LTVSY 622
Query: 234 AVTYWLTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSY 293
AV YW+ G P KI L +A +G ++L ++ A P + + G + PY
Sbjct: 623 AVKYWMEKGMPCGKIALGMANYGHAFELSDPTKTALGAPANVN-KGRSYPYY-------- 673
Query: 294 PEVCGKLINPNQQKGMRPHLRKVTD-PSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQK 352
E+C KL L KVTD P+K Y + G W++Y+D + G+K
Sbjct: 674 -ELC-KL-----------PLTKVTDNPAK--APYGY-------HGSQWIAYDDVTSLGRK 711
Query: 353 AAYVKSKNLGGVAIVDLSLDDFRGLCTGDKYPILRAAKYRL 393
+K +NL G + LDDF +C +P++ A +Y L
Sbjct: 712 VELIKKENLLGAMFWAIDLDDFGNVCGQGAHPLMGAVRYML 752
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 104 bits (249), Expect = 1e-22
Identities = 102/387 (26%), Positives = 168/387 (43%), Gaps = 49/387 (12%)
Query: 10 LSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDN--YRAITSLKAKYPGLTVLLSVGG 67
+ T LL G+A + + L + +D+ Y+ LK K PGL LL+VGG
Sbjct: 149 MQLLTLLLLGFASFAAASNYVHRCRHTLAMFEWNDDKLYKEFNDLKLKNPGLKTLLAVGG 208
Query: 68 DADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRSTWGSL 127
++ ++ + +R FI+S + + Q+ FDG DL W++P ++ S G
Sbjct: 209 WNHENYKSPFSRMVRTAASRKVFIDSSIAMLRQWNFDGFDLDWEYP---GNRVGSDPGD- 264
Query: 128 WHGIKKTFGTTPVDEKESEHREGFTALVRELKQALIHKPKMQLGVTVLPYVNSTI--YHD 185
K+ F E + F +L+ A ++P++ L V +TI ++
Sbjct: 265 ----KQRFTILC-----QELLDAF-----KLEAAQTNRPRLLLTAAVAA-GKATIDKAYE 309
Query: 186 VPAIINLVDYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPS 245
V I ++D +N+ AYD R E + + P A YW+ GAP+
Sbjct: 310 VDKIGQILDLINLMAYD--LRGMWEPETGHHTALEGPPGEE--LTVSFAAQYWIDKGAPA 365
Query: 246 QKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQ 305
KI L + T+GR +KL AD G+ +G G Y + G L+Y E+C
Sbjct: 366 SKIALGLGTYGRAFKL-ADQTRHGL-KAPANGNPTRGQYTREPGFLAYYEIC-------- 415
Query: 306 QKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKA-AYVKSKNLGGV 364
+ +L+ + S A + P + G +WV Y+D + K +K+K + G
Sbjct: 416 ----KMNLQVTSTESS-----AVKAPYGH-VGDLWVGYDDEYSLSLKVERVIKAKGMAGA 465
Query: 365 AIVDLSLDDFRG-LCTGDKYPILRAAK 390
+ LDDF+G C YP++ A K
Sbjct: 466 MFWAIPLDDFKGQFCGKGPYPLINAVK 492
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 104 bits (249), Expect = 1e-22
Identities = 106/395 (26%), Positives = 169/395 (42%), Gaps = 69/395 (17%)
Query: 3 PLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVL 62
P ++DP+L CTH++Y +A + D KL N D Y+ + LK+ + L
Sbjct: 42 PDNIDPSL--CTHIVYAFAKMNADNSKLAMFEWN---DAAM--YKKVNDLKSS-SNMKTL 93
Query: 63 LSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRS 122
L+VGG P + ++ + R FI+ +L + FDG+DL W++P +
Sbjct: 94 LAVGGWNMGSGP--FQDMVSTASRRKIFIDDAILFLRNHMFDGLDLDWEYPGAR------ 145
Query: 123 TWGSLWHGIKKTFGTTPVDEKESEHREGFTALVRELKQAL----IHKPKMQLGVTVLPYV 178
G+ P E +HR FT L +EL A + K +L +T
Sbjct: 146 -------------GSPP----EDKHR--FTLLCQELLAAFETEAANTGKPRLLLTAAVSA 186
Query: 179 NSTIY---HDVPAIINLVDYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADAAV 235
T +++ A+ +D++N+ +YD + + + A +PL AV
Sbjct: 187 GETTVKNGYEISALGQALDWINLMSYDLHGDWEDT-TGHHAA--MDSSTGDPL-TVTHAV 242
Query: 236 TYWLTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPE 295
W+ G PS KI L I +GR++ L ++ P G GPY K G ++Y E
Sbjct: 243 DLWIAGGMPSNKIALGIPLYGRSFTLKTANKTLDAPAT----KGGQGPYTKEAGYIAYFE 298
Query: 296 VCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAY 355
+C + G+ VT Y D N + WV Y+D + +K Y
Sbjct: 299 IC--------KMGL-----SVTRDPVLVSPYGV---DVNNQ---WVGYDDVTSVQEKVNY 339
Query: 356 VKSKNLGGVAIVDLSLDDFRGLCTGDKYPILRAAK 390
+K K+L G + LDDF+G C YP++ A K
Sbjct: 340 IKKKSLLGAMFWAMDLDDFKGDCGQGSYPLMTAVK 374
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 93.5 bits (222), Expect = 3e-19
Identities = 104/398 (26%), Positives = 175/398 (43%), Gaps = 66/398 (16%)
Query: 3 PLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVL 62
P D+DP L CTH+++ ++ + T+ + +N D Y+ I +LK P L
Sbjct: 427 PEDIDPHL--CTHVIHSFSKVNLTTHVMEKYEKN-----DFDLYKRINALKKINPKLKTQ 479
Query: 63 LSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRS 122
++VGG E+ ++ ++ +++ R FI S + GFDG+DL W++P ++ +S
Sbjct: 480 IAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTNGFDGLDLDWEYPGMRGGSPKS 539
Query: 123 TWGSLWHGIKKTFGTTPVDEKESEHREGFTALVREL-KQALIHKPKMQLGVTVLPYVNST 181
G T + + E R+ F A ++ K+ L+ + G+ +
Sbjct: 540 DKGRF----------TLLCQ---ELRDAFEAEAKDSGKERLLLTAAVAAGLWTIKDA--- 583
Query: 182 IYHDVPAIINLVDYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRN-P------LQNADAA 234
+D+ I +D++NV YD + T K +TA P + N D
Sbjct: 584 --YDIEGISKPLDWINVMTYDLH-GTWEPKTGHHTAMGPDGDKLTLPFAIWYWMNNRDTW 640
Query: 235 VTYWLTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYP 294
+ +G P+ KIVL + T+GR + L E AG + +AG Y +G L+Y
Sbjct: 641 EKPGIRNGMPANKIVLGLGTYGRAFGL----ESAG------NNGLDAGKYTGAKGFLAYF 690
Query: 295 EVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAA 354
E+C + G+ V + +K Y ++ G WV +++P + K
Sbjct: 691 EIC--------KMGL-----TVVENNKAKAPYGYK-------GHDWVGFDNPKSLIYKID 730
Query: 355 YVKSKN-LGGVAIVDLSLDDFRG-LCTGDKYPILRAAK 390
V KN L GV + LDDF G C KYP++ A K
Sbjct: 731 NVVKKNQLRGVMFWAIDLDDFSGEHCGQGKYPLMSAVK 768
Score = 91.1 bits (216), Expect = 1e-18
Identities = 99/391 (25%), Positives = 167/391 (42%), Gaps = 64/391 (16%)
Query: 3 PLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVL 62
P D+DP L CTH+L+ +A + T+KL EN H+ Y+ I +LK P L
Sbjct: 42 PEDIDPFL--CTHILFSFAKVNQTTHKLDIYEEN-----DHELYQRINALKKINPKLKTQ 94
Query: 63 LSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRS 122
++VGG E+ ++ ++ +++ R FI S + +GFDG+DL W++P ++ +S
Sbjct: 95 IAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTHGFDGLDLDWEYPGMRGGSPKS 154
Query: 123 TWGSLWHGIKKTFGTTPVDEKESEHREGFTALVREL-KQALIHKPKMQLGVTVLPYVNST 181
G + E RE F A + K+ ++ + G+ +
Sbjct: 155 DKGRFTLLCR-------------ELREAFEAEAKASGKERMLLTAAVAAGLWTIKGA--- 198
Query: 182 IYHDVPAIINLVDYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTS 241
+D+ I +D++N+ YD + T K +TA P A+ YW+ +
Sbjct: 199 --YDIADIAEPLDWINLMTYDLH-GTWEYKTGHHTA--MGPDGDK--LTLPFAIWYWMNN 251
Query: 242 GAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLI 301
+K G + A+ + P + +G Y EG L+Y E+C
Sbjct: 252 RDTWEKP-------GIRKGMPANKIVLAWPLMGV----HSGKYTDAEGFLAYYEIC---- 296
Query: 302 NPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKN- 360
++G+ V +K Y ++ G W+ ++DP++ K V KN
Sbjct: 297 ----KRGL-----TVVHKNKANAPYGYK-------GKDWIGFDDPNSLVYKIDNVVKKNQ 340
Query: 361 LGGVAIVDLSLDDFRG-LCTGDKYPILRAAK 390
L GV + LDDF G C KYP++ A K
Sbjct: 341 LRGVMFWAIDLDDFSGEHCGQGKYPLMSAVK 371
>SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 270
Score = 60.5 bits (140), Expect = 2e-09
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 7 DPALSFCTHLLYGYAGI-QPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSV 65
D CTHL+Y +A I Q + + N+ D+ + + A LK K P L LL+V
Sbjct: 42 DIPADLCTHLMYSFAKINQKNELAMYEWND----DKLYPRFNA---LKQKNPELKTLLAV 94
Query: 66 GGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVK 116
GG ++ ++++ R FI+S + + +GFDG+DL W++P +
Sbjct: 95 GGWNHENANSPFSRMVKTAATRKVFIDSVIRILRTWGFDGLDLDWEYPATR 145
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 49.6 bits (113), Expect = 4e-06
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 14/117 (11%)
Query: 276 DGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNG 335
+G GPY + G LSY E+C + + K M+ TD S+ Y + D
Sbjct: 10 NGNPPRGPYTRESGFLSYYEICDMM---PKMKTMK------TDQSEVRAPYGYVKQD--- 57
Query: 336 EGGIWVSYEDPDTAGQKA-AYVKSKNLGGVAIVDLSLDDFRG-LCTGDKYPILRAAK 390
+WV Y+D + K +K+K L G L LDDF G C YP++ A K
Sbjct: 58 WADVWVGYDDERSLQLKVEEVIKAKGLAGAMFWALDLDDFDGSSCGKGNYPLMNAVK 114
>SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)
Length = 561
Score = 39.1 bits (87), Expect = 0.006
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 46 YRAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDG 105
Y+ + LK+ + LL+VGG P + ++ + R FI+ +L + FDG
Sbjct: 2 YKKVNDLKSS-SNMKTLLAVGGWNMGSGP--FQDMVSTASRRKIFIDDAILFLRNHMFDG 58
Query: 106 IDLAWQFP 113
+DL W++P
Sbjct: 59 LDLDWEYP 66
>SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 326 YAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGGVAI 366
+ ++ PD + +G V+YEDP TA + K+ G +I
Sbjct: 208 WIYKHPDGSSKGECTVTYEDPPTASAAIEWFNGKDFMGQSI 248
>SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 29.9 bits (64), Expect = 3.7
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 284 YVKTEGLLSYPEVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSY 343
+V+TE + + P+ +K R H RKV + GT+A + + ++
Sbjct: 251 FVRTEARTACNPIMMNFQKPDDEKRSRGH-RKVKEAG--VGTFATGIQEHK------INE 301
Query: 344 EDPDTAGQKAAYVK-SKNLGGVA-IVDLSLDDFR------GLCTG 380
E P+T G K AY K S +L V ++LD+ R GLC G
Sbjct: 302 EKPETKGVKCAYCKGSHHLDNCCEFVKITLDERRAFIIAKGLCWG 346
>SB_32997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 155 VRELKQALIHKPKMQLGVTVLPYVNSTIYHDVPAIINLVDYVN 197
+R++K+A H K G V N I D + NL+D++N
Sbjct: 233 LRQIKRARAHANKSDQGSEVPKIENHRIRLDTNKVDNLIDFIN 275
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.137 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,618,741
Number of Sequences: 59808
Number of extensions: 653233
Number of successful extensions: 1264
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1234
Number of HSP's gapped (non-prelim): 22
length of query: 393
length of database: 16,821,457
effective HSP length: 84
effective length of query: 309
effective length of database: 11,797,585
effective search space: 3645453765
effective search space used: 3645453765
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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