Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000648-TA|BGIBMGA000648-PA|IPR001223|Glycoside
hydrolase, family 18, catalytic domain, IPR011583|Chitinase II
(393 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 87 2e-17
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 84 1e-16
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 82 7e-16
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 77 3e-14
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 71 1e-12
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 64 1e-10
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 60 2e-09
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 55 7e-08
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 52 9e-07
At1g79890.1 68414.m09334 helicase-related similar to CHL1 potent... 33 0.33
At1g61810.1 68414.m06972 glycosyl hydrolase family 1 protein con... 31 1.7
At4g15960.1 68417.m02423 epoxide hydrolase, putative similar to ... 30 2.3
At5g08110.1 68418.m00946 DEAD/DEAH box helicase, putative severa... 30 3.1
At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family pr... 30 3.1
At5g18820.1 68418.m02236 chaperonin, putative similar to SWISS-P... 29 4.0
At1g54010.1 68414.m06153 myrosinase-associated protein, putative... 29 4.0
At5g10250.1 68418.m01190 phototropic-responsive protein, putativ... 29 5.3
At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containi... 29 5.3
At2g33210.1 68415.m04069 chaperonin, putative similar to SWISS-P... 29 5.3
At1g54000.1 68414.m06152 myrosinase-associated protein, putative... 29 5.3
At1g30110.1 68414.m03680 diadenosine 5',5'''-P1,P4-tetraphosphat... 29 5.3
At1g07260.1 68414.m00772 UDP-glucoronosyl/UDP-glucosyl transfera... 29 5.3
At2g40095.1 68415.m04928 expressed protein 28 9.3
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 87.0 bits (206), Expect = 2e-17
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 43/288 (14%)
Query: 11 SFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSVGGDAD 70
S THL +A I TY+++ + N T +++ + P + LLS+GGD
Sbjct: 45 SLFTHLFCAFADINTLTYQVIVSSRNKPKFSTFTQ-----TVRRRNPTVKTLLSIGGDFT 99
Query: 71 TEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRSTWGSLWHG 130
+ + + +R FI+S + LA GF G+DL W++P +
Sbjct: 100 YNFA--FASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYPSI--------------- 142
Query: 131 IKKTFGTTPVDEKESEHREGFTALVRELKQALIHKPKMQLGVTVL-PYVNSTIYHDVPAI 189
TT +D RE A+ E + + KP++ L V Y ++ H V A+
Sbjct: 143 ------TTEMDNFGKLLREWRLAVEAEARSS--GKPRLLLTAAVFYSYSYYSVLHPVNAV 194
Query: 190 INLVDYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIV 249
+ +D+VN+ AYD+Y + +++ AP+Y P P + DA V W +G P++K V
Sbjct: 195 ADSLDWVNLVAYDFY-ESGSSRVTCSPAPLYDPITTGP--SGDAGVRAWTQAGLPAKKAV 251
Query: 250 LSIATFGRTWKL-DADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEV 296
L +G W L DA + H +GP + +G + Y ++
Sbjct: 252 LGFPLYGYAWCLTDAKN--------HNYYANSSGPAISPDGSIGYDQI 291
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 84.2 bits (199), Expect = 1e-16
Identities = 98/381 (25%), Positives = 165/381 (43%), Gaps = 60/381 (15%)
Query: 5 DLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAIT-SLKAKYPGLTVLL 63
D+D +L THL +A ++ ++Y++ N + A T +++ + P + LL
Sbjct: 22 DIDSSLF--THLFCTFADLEAESYEITIATWN------QAPFHAFTETVQQRNPHVKTLL 73
Query: 64 SVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRST 123
S+GG + + + + + +R +FI S + +A YGF G+DL W++PR + +
Sbjct: 74 SIGGG--NADKDAFASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNEEEMY--D 129
Query: 124 WGSLWHGIKKTFGTTPVDEKESEHREGFTALVRELKQALIHKPKMQLGVTVLPYVNSTIY 183
+G L + E ES + G TAL+ L A+ + Q GV PY
Sbjct: 130 FGKLLEEWRSAV------EAES-NSSGTTALI--LTAAVYYSSNYQ-GV---PY------ 170
Query: 184 HDVPAIINLVDYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGA 243
V AI N +D++N+ AYD+Y + A +Y P + ++ D+ V W +G
Sbjct: 171 -PVLAISNSLDWINLMAYDFYGPGWSTVTGP-PASLYLPTDG---RSGDSGVRDWTEAGL 225
Query: 244 PSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINP 303
P++K VL +G W L AD ++ G T GP + +G +SY ++ +++
Sbjct: 226 PAKKAVLGFPYYGWAWTL-ADPDVNGYDANTT------GPAISDDGEISYRQLQTWIVDN 278
Query: 304 NQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGG 363
KV D G Y + G W+ Y+ + K Y K K L G
Sbjct: 279 G--------ATKVHD-DMMVGDYCY-------AGTTWIGYDSEKSIVTKVIYAKQKGLLG 322
Query: 364 VAIVDLSLDDFRGLCTGDKYP 384
+ DD L + P
Sbjct: 323 YFSWHVGGDDNSELSSAGSTP 343
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 81.8 bits (193), Expect = 7e-16
Identities = 93/376 (24%), Positives = 157/376 (41%), Gaps = 63/376 (16%)
Query: 5 DLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLS 64
D+D +L THL +A + T ++ + N T +++ + P + LLS
Sbjct: 43 DIDSSLF--THLFCAFADLNSQTNQVTVSSANQPKFSTFTQ-----TVQRRNPSVKTLLS 95
Query: 65 VGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRSTW 124
+GG + Y + + +R +FI+S + +A YGF G+DL W++P +
Sbjct: 96 IGGGI--ADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTN--- 150
Query: 125 GSLWHGIKKTFGTTPVDEKESEHREGFTALVRELKQALIHKPKMQLGVTVLPYVNS--TI 182
FGT RE +A+V E + KP++ L V Y N+ ++
Sbjct: 151 ----------FGTLL--------REWRSAVVAEASSS--GKPRLLLAAAVF-YSNNYYSV 189
Query: 183 YHDVPAIINLVDYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSG 242
+ V A+ + +D+VN+ AYD+Y + A ++ P N P + DA W+ +G
Sbjct: 190 LYPVSAVASSLDWVNLMAYDFYGPGWSRVTGP-PAALFDPSNAGP--SGDAGTRSWIQAG 246
Query: 243 APSQKIVLSIATFGRTWKL-DADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLI 301
P++K VL +G W+L +A+S H+ G + +G + Y ++ K I
Sbjct: 247 LPAKKAVLGFPYYGYAWRLTNANS--------HSYYAPTTGAAISPDGSIGYGQI-RKFI 297
Query: 302 NPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNL 361
N S G Y + G W+ Y+D + K Y K + L
Sbjct: 298 VDNG--------ATTVYNSTVVGDYCY-------AGTNWIGYDDNQSIVTKVRYAKQRGL 342
Query: 362 GGVAIVDLSLDDFRGL 377
G + DD GL
Sbjct: 343 LGYFSWHVGADDNSGL 358
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 76.6 bits (180), Expect = 3e-14
Identities = 84/340 (24%), Positives = 141/340 (41%), Gaps = 50/340 (14%)
Query: 14 THLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSVGGDADTEE 73
THL +A + +++K+ + I T ++K + P + LLS+GG
Sbjct: 41 THLFCAFADLDANSHKVFVSQAHEFIFSTFTE-----TVKIRNPQVKTLLSIGGK--NAN 93
Query: 74 PEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRSTWGSLWHGIKK 133
+ + + Q+R FI+S + +A GF G+DLAW++P + + +G+L ++
Sbjct: 94 NSAFASMASNHQSRKTFIDSWIFIARSNGFHGLDLAWEYPYSDHEM--TDFGNLVGELRA 151
Query: 134 TFGTTPVDEKESEHREGFTALVRELKQALIHKPKMQLGVTVL-PYVNSTIYHDVPAIINL 192
E+E R KP + L V V T + V +
Sbjct: 152 AV--------EAESRRS-------------SKPTLLLTAAVYYSSVYKTFTYPVQVMRES 190
Query: 193 VDYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 252
+D+VN+ AYD+Y ++K TA ++ N N + D+ + W+ G P +K VL
Sbjct: 191 LDWVNIIAYDFYGPVSSSKFTVPTAGLHVSSN-NEGPSGDSGLKQWIKDGLPEKKAVLGF 249
Query: 253 ATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPH 312
+ G W L D + G G ++ V +G ++Y ++ K I +
Sbjct: 250 SYVGWAWTLQNDKD-TGYNAA-AAGVAKSEDDVSEDGSINYAQI-NKFIRDEE------- 299
Query: 313 LRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQK 352
KV DP K G Y F IW+ YED + K
Sbjct: 300 AAKVYDP-KVVGHYCFAKK-------IWIGYEDTQSVEAK 331
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 71.3 bits (167), Expect = 1e-12
Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 35/256 (13%)
Query: 14 THLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSVGGDADTEE 73
THL +A + P T +V + ++ N+ I +K K P + LLS+GG +
Sbjct: 39 THLFCAFADLDPQTNSVVVSGAH---EQEFSNFTKI--VKKKNPHVQTLLSIGGR--NAD 91
Query: 74 PEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRSTWGSLWHGIKK 133
+ + + +R +FI S + A Y FDG+DL W++P+ ++R+ +G L ++
Sbjct: 92 KSAFASMASNPTSRKSFIWSAISSARYYRFDGLDLVWKYPK-DDVEMRN-FGQLLEQWRE 149
Query: 134 TFGTTPVDEKESEHREGFTALVRELKQALIHKPKMQLGVTVLPYVNSTIYHDVPAIINLV 193
E ++E E L L A+ + P V ++ + + I +
Sbjct: 150 AI------EDDAERTERMPLL---LTAAVYYSP-----------VYDSVSYPIREIKKKL 189
Query: 194 DYVNVGAYDYYTRTRNNKEADYTAPIYTPQN-RNPLQNADAAVTYWLTSGAPSQKIVLSI 252
D+VN+ AYD+Y+ ++ A ++ P N + P D + W+ +G P++K VL
Sbjct: 190 DWVNLIAYDFYS---SSTTIGPPAALFDPSNPKGPC--GDYGLKEWIKAGLPAKKAVLGF 244
Query: 253 ATFGRTWKLDADSEIA 268
G TW L + ++ A
Sbjct: 245 PYVGWTWSLGSGNDAA 260
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 64.5 bits (150), Expect = 1e-10
Identities = 86/352 (24%), Positives = 154/352 (43%), Gaps = 58/352 (16%)
Query: 14 THLLYGYAGIQPDTYKL-VSLNENLDIDR-THDNYRAITSLKAKYPGLTVLLSVGGDADT 71
THL +A + T+++ +S + + TH ++K K + LLS+GG D
Sbjct: 38 THLFCAFADVDSSTHEVTISAANSCQVSSFTH-------TVKDKNTDVQTLLSIGGK-DA 89
Query: 72 EEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRSTWGSLWHGI 131
++ ++ S+ R AFI+S + +A + F G+DLAW++P + + +G L
Sbjct: 90 DKAVLASMASNSKN-RKAFIDSSIDIARKKDFYGLDLAWEYPSNDVE--MANFGKL---- 142
Query: 132 KKTFGTTPVDEKESEHREGFTALVRELKQALIHKPKMQLGVTVLPYVNSTIYHDVPAIIN 191
K + V+E + ++ L L A+ + P Y + V AI +
Sbjct: 143 VKEWRAAVVEESDRTNQ-----LPLLLTAAVYYSP---------DYYGEE--YPVQAIAD 186
Query: 192 LVDYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLS 251
+D+VN+ AYD+Y + A ++ P N ++ D+ ++ WL + P++K VL
Sbjct: 187 NLDFVNIMAYDFYGPGWSPVTGP-PAALFDPSNPAG-RSGDSGLSKWLEAKLPAKKAVLG 244
Query: 252 IATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRP 311
+ G W L+ D+E G TDG + ++G ++Y ++ +I+
Sbjct: 245 FSYCGWAWTLE-DAENNGYDAA-TDGAA-----ISSDGSITYAKIRNYIIDNG------- 290
Query: 312 HLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGG 363
DP+ G Y + G W+ Y+D + K Y K K L G
Sbjct: 291 -AATFHDPAV-IGFYCY-------VGTTWIGYDDNQSIVSKVRYAKLKGLLG 333
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 60.5 bits (140), Expect = 2e-09
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 27/187 (14%)
Query: 80 LLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRSTWGSLWHGIKKTFGTTP 139
++ ++ +R +FI+S + +A GF G+DLAW++P + + +G L +
Sbjct: 79 IVSNRTSRESFISSSISIARSLGFYGLDLAWEYPNNDVEM--NNFGKLLQEWRSAV---- 132
Query: 140 VDEKESEHREGFTALVRELKQALIHKPKMQLGVTVLPYVNSTIYHDVPAIINLVDYVNVG 199
E ES+ R G L+ + V NS Y V AI +D+VN+
Sbjct: 133 --EVESQ-RTGIRPLL------------LTAAVYYTSDYNSVSY-PVQAINRSLDWVNLI 176
Query: 200 AYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSIATFGRTW 259
AY++Y T E A +Y P + P D + +WL +G P +K V G +W
Sbjct: 177 AYEFYGLTT---EIGPPAGLYDPSIKGPC--GDTGLKHWLKAGLPEKKAVFGFPYVGWSW 231
Query: 260 KLDADSE 266
LD D +
Sbjct: 232 TLDDDKD 238
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 55.2 bits (127), Expect = 7e-08
Identities = 81/351 (23%), Positives = 146/351 (41%), Gaps = 54/351 (15%)
Query: 14 THLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSVGGDADTEE 73
THL +A + T+++ N ++ ++K K + LLS+GG D ++
Sbjct: 46 THLFCAFADVDSSTHEVTISAAN-----SYQFSSFTETVKEKNTDVQTLLSIGGK-DADK 99
Query: 74 PEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRSTWGSLWHGIKK 133
++ S+ R AFI+S + +A + F G+DLAW++P + + +G L +
Sbjct: 100 AVLASMASNSKN-RKAFIDSSIDIARKKDFYGLDLAWEYPSNDVE--MTNFGKL----LE 152
Query: 134 TFGTTPVDEKESEHREGFTALVRELKQALIHKPKMQLGVTVLPYVNSTIYHDVPAIINLV 193
+ V+E + ++ L L A+ + P+ GV + V AI + +
Sbjct: 153 EWRAAVVEESDKTNQ-----LPLLLTAAVYYSPQYD-GVE----------YPVKAIADNL 196
Query: 194 DYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSG-APSQKIVLSI 252
D+VN+ AYD+Y + A + P N ++ ++ + WL P +K VL
Sbjct: 197 DFVNIMAYDFYGPGWSPVTGPPAALFHDPSNPAG-RSGNSGLRKWLDEAKLPPKKAVLGF 255
Query: 253 ATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPH 312
G W L+ D+E G TDG + +G ++Y ++ +++
Sbjct: 256 PYCGWAWTLE-DAENNGYDAA-TDGAA-----ISPDGSITYAKIRNYIVDNG-------- 300
Query: 313 LRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGG 363
DP+ G Y + G W+ Y+D + K Y K L G
Sbjct: 301 AATFHDPAV-IGFYCY-------VGNTWIGYDDNQSIVYKVKYAKFTGLLG 343
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 51.6 bits (118), Expect = 9e-07
Identities = 54/206 (26%), Positives = 83/206 (40%), Gaps = 28/206 (13%)
Query: 179 NSTIYHDVPAIINLVDYVNVGAYDYYTRTRNNKEADYTAPIYTPQNRNPLQNADAAVTYW 238
N +Y V I L+D+VN+ AYD+Y A +Y Q+ P + D+ V W
Sbjct: 79 NGVVY-PVKFISELLDWVNIKAYDFYGPGCTEVTGP-PAALYL-QSDGP--SGDSGVKDW 133
Query: 239 LTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCG 298
+ +G P++K VL +G W L AD P H GP + +G +SY ++
Sbjct: 134 IDAGLPAEKAVLGFPYYGWAWTL-AD------PKNHGYYVDTTGPAISDDGEISYSQLKT 186
Query: 299 KLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKS 358
+++ K H V G Y + G W+ Y+ ++ K Y K
Sbjct: 187 WIVD---NKATTVHDNIV------IGDYCY-------AGTTWIGYDSEESIVTKVIYAKQ 230
Query: 359 KNLGGVAIVDLSLDDFRGLCTGDKYP 384
K L G + DD L + P
Sbjct: 231 KGLLGYFSWQVGGDDKSELSSAGSSP 256
Score = 41.9 bits (94), Expect = 7e-04
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 80 LLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPR 114
+ S R +FI S + +A YGFDG+DL W++PR
Sbjct: 1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPR 35
>At1g79890.1 68414.m09334 helicase-related similar to CHL1 potential
helicase protein (GI:2632247) [Homo sapiens]; similar to
helicase GB:AAB06962 [Homo sapiens]
Length = 882
Score = 33.1 bits (72), Expect = 0.33
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 284 YVKTEGLLSYPEVCGKLINPNQQKGMRPH--LRKVTDPSKRFGTYAFRLPDDNGEGGIWV 341
Y+K ++ G+ + QK H + K+T + F L ++NG+G I +
Sbjct: 466 YIKESNIIHKVSGYGERVAAMLQKDPVAHEEMSKLTS-FRAFSDMLVALTNNNGDGRIII 524
Query: 342 SYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 373
S T+GQ Y+K L G + +D+
Sbjct: 525 SRTSSSTSGQHGGYIKYVMLTGAKLFSEVVDE 556
>At1g61810.1 68414.m06972 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase (GI:3820531) [Pinus
contorta]; similar to beta-glucosidase GI:804655 from
(Hordeum vulgare)
Length = 520
Score = 30.7 bits (66), Expect = 1.7
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 19 GYAGIQPDTYKLVSLNENLDIDRTHDN----YRAITSLKAKYPGLTVLLSVGGDADTEEP 74
GYA ++ D V++ E D++ H + ++ + LK +YP + + ++ G D ++P
Sbjct: 368 GYA-LKLDRKGNVTIGELTDVNWQHIDPTGFHKMLNYLKDRYPNMPMFITENGFGDLQKP 426
Query: 75 EKYNLLLESQQARTAFINSGVLLAEQYGF-DGIDLAWQF 112
E + L + R ++ SG L A Q DG ++ F
Sbjct: 427 ETTDKELLNDTKRIQYM-SGYLEALQAAMRDGANVKGYF 464
>At4g15960.1 68417.m02423 epoxide hydrolase, putative similar to
epoxide hydrolase [Solanum tuberosum] GI:407944;
contains Pfam profile PF00561: hydrolase, alpha/beta
fold family
Length = 375
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 60 TVLLSVGGDADTEEPEK---YNLLLESQQ--ARTAFINSGVLLAEQYGFD-GIDLAWQFP 113
T+ + G DTE PEK Y LL + A + G G D G +AWQ
Sbjct: 109 TIAPDLRGYGDTEAPEKVEDYTLLKRGRSVVALIVAVTGGDKAVSVVGHDWGAMIAWQLC 168
Query: 114 RVKPKKIRS 122
+ +P+K+++
Sbjct: 169 QYRPEKVKA 177
>At5g08110.1 68418.m00946 DEAD/DEAH box helicase, putative several
putative ATP-dependent helicases
Length = 1058
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Query: 185 DVPAIINLVDYVNVGAYDYYTRTRNNKE-----ADYTAPIYTPQNRNPLQNADAAVTYW 238
D+ + L + VNV DYYTRTR+ + D P+ P+ P +A T W
Sbjct: 834 DIKEKVALCELVNV---DYYTRTRDYTDIKVTGGDTAYPVKAPKKPTPQTHACRVTTKW 889
>At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family
protein bHLH protein, Arabidopsis thaliana,
PATCHX:E255557
Length = 589
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 323 FGTYAFRLPDDNGEG--GIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDDFRGLCTG 380
FG++AF L D GE G+W+S + +G AA V + N G + + LC G
Sbjct: 259 FGSWAFNLNPDQGENDPGLWISEPNGVDSGLVAAPVMN-NGGNDSTSNSDSQPISKLCNG 317
>At5g18820.1 68418.m02236 chaperonin, putative similar to
SWISS-PROT:P08926- RuBisCO subunit binding-protein alpha
subunit, chloroplast precursor (60 kDa chaperonin alpha
subunit, CPN-60 alpha)[Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 575
Score = 29.5 bits (63), Expect = 4.0
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 38 DIDRTHDNY--RAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGV 95
D+ T ++Y + I AK G ++ VGG +TE ++ + +++ A A + G+
Sbjct: 383 DLAETDNSYLSKKIAERIAKLTGGVAVIKVGGHTETELEDRKLRIEDAKNATFAAMREGI 442
Query: 96 LLAEQYGFDGIDLAWQFPRVKPKKIRSTWGSLWHGIKKTFGTTP 139
+ G I L + PR+K + ++ + I T P
Sbjct: 443 VPGG--GATYIHLLDEIPRIKKNLMEDSYEQIGADIVAMALTAP 484
>At1g54010.1 68414.m06153 myrosinase-associated protein, putative
similar to myrosinase-associated protein GI:1769969 from
[Brassica napus]; contains Pfam profile PF00657:
Lipase/Acylhydrolase with GDSL-like motif
Length = 386
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 196 VNVGAYDYYTRTRNNKEAD-YTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSIAT 254
+ +GA DY T+NN AD T + N L+N D ++ Y +SGA S+ ++ ++A
Sbjct: 156 IYIGANDYLNFTKNNPNADASTQQAFVTSVTNKLKN-DISLLY--SSGA-SKFVIQTLAP 211
Query: 255 FG 256
G
Sbjct: 212 LG 213
>At5g10250.1 68418.m01190 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 607
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 107 DLAWQFPRVKPKKIRS-TWGSLWHGIKKTFGTTPVDEKESE 146
+L ++ R+ K+ S WG W +KK+F T DE+ E
Sbjct: 546 ELQQEYERLSSKQKSSHNWGLRWQKVKKSFQTKREDEETRE 586
>At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 551
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 16 LLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITS 51
LLYGY+G+ +KL L+ +RT ++ A+ S
Sbjct: 130 LLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLS 165
>At2g33210.1 68415.m04069 chaperonin, putative similar to
SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial
precursor (HSP60-2) [Cucurbita maxima]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 585
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 54 AKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVL 96
AK G +L +GG ++TE EK + + ++ A A + G++
Sbjct: 401 AKLSGGVAVLKIGGASETEVSEKKDRVTDALNATKAAVEEGIV 443
>At1g54000.1 68414.m06152 myrosinase-associated protein, putative
similar to myrosinase-associated proteins GI:1769968,
GI:1769970, GI:1216391, GI:1216389 from [Brassica
napus]; contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; contains 1 predicted transmembrane
domain
Length = 391
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 196 VNVGAYDYYTRTRNNKEADYTA-PIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSIAT 254
+ +GA DY T+NN AD +A + N L+N D + Y +SGA S+ ++ ++A
Sbjct: 156 IYIGANDYLNFTKNNPTADASAQQAFVTSVTNKLKN-DISALY--SSGA-SKFVIQTLAP 211
Query: 255 FG 256
G
Sbjct: 212 LG 213
>At1g30110.1 68414.m03680 diadenosine 5',5'''-P1,P4-tetraphosphate
hydrolase, putative similar to diadenosine
5',5'''-P1,P4-tetraphosphate hydrolase GI:1888557 from
[Lupinus angustifolius], [Hordeum vulgare subsp.
vulgare] GI:2564253; contains Pfam profile PF00293:
NUDIX domain
Length = 175
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 66 GGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRSTWG 125
GG D E+P K + E Q+ +GV+ AE L + FP K+ WG
Sbjct: 40 GGIEDGEDP-KSAAMRELQE------ETGVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWG 92
Query: 126 SLWHG 130
WHG
Sbjct: 93 GEWHG 97
>At1g07260.1 68414.m00772 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 476
Score = 29.1 bits (62), Expect = 5.3
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 189 IINLVDYVNVGAYDYYTRTRNNKEADY-TAPIYTPQNRNPLQNADAA----VTYWLTSGA 243
++N V + A+DY+ R N Y P+ + ++R P N DA+ + WL
Sbjct: 221 LVNSVTCLEQNAFDYFARLDENYPPVYPVGPVLSLKDR-PSPNLDASDRDRIMRWLEDQP 279
Query: 244 PSQKIVLSIATFGRTWKLDADSEIA 268
S + + + G KL + EIA
Sbjct: 280 ESSIVYICFGSLGIIGKLQIE-EIA 303
>At2g40095.1 68415.m04928 expressed protein
Length = 209
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 112 FPRVKPKKIRSTWGSLWHGIKKTF 135
F + + K R W SLW GIK F
Sbjct: 3 FSKEEISKTRKLWSSLWRGIKTIF 26
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.137 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,367,971
Number of Sequences: 28952
Number of extensions: 467705
Number of successful extensions: 929
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 889
Number of HSP's gapped (non-prelim): 40
length of query: 393
length of database: 12,070,560
effective HSP length: 83
effective length of query: 310
effective length of database: 9,667,544
effective search space: 2996938640
effective search space used: 2996938640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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