Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000647-TA|BGIBMGA000647-PA|IPR002048|Calcium-binding
EF-hand, IPR011047|Quinonprotein alcohol dehydrogenase-like
(596 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 36 0.012
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 33 0.11
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 31 0.45
SPAC144.15c |cog1||Golgi transport complex subunit Cog1 |Schizos... 31 0.45
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 30 0.79
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 30 1.0
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 30 1.0
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 29 1.4
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 1.4
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 29 1.8
SPAC26H5.07c |||seven transmembrane receptor-like protein|Schizo... 29 2.4
SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr... 29 2.4
SPCC613.03 |||conserved fungal protein|Schizosaccharomyces pombe... 29 2.4
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 29 2.4
SPBC2A9.11c ||SPBC2D10.01c|nuclear export factor|Schizosaccharom... 28 4.2
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 28 4.2
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 5.6
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 5.6
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 27 7.4
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 7.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 7.4
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 36.3 bits (80), Expect = 0.012
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 10/151 (6%)
Query: 25 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 84
D+SE + +K L +Y + +K LE E++++ + E E L+ +
Sbjct: 843 DESELNSVKRSLLKYENKLQIIKSSSSGLE------EQMQRINSEISDKRNELESLEELQ 896
Query: 85 HNVRTRLDE---IKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIED 141
H V TR+++ I R + L ++ E N+ ++G +P + + + + I
Sbjct: 897 HEVATRIEQDAKINERNAAKRSLLLARKKE-CNEKIKSLGVLPEEAFIKYVSTSSNAIVK 955
Query: 142 LKKLIMKTTSDLEAADKKRREEFKTYEIQKE 172
I + D + +KK E+F + Q++
Sbjct: 956 KLHKINEALKDYGSVNKKAYEQFNNFTKQRD 986
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 33.1 bits (72), Expect = 0.11
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 33 KDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLD 92
+D+ E+ E Y ++ + + D ++RLEK+DE K + E L + NV L
Sbjct: 104 RDEAEQKAEI--YNRDALNTKQEHLDIKKRLEKSDETVCKLKEENENLQDMLRNVGNELV 161
Query: 93 EIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHL 129
E R E++ L Q E + V SSE L
Sbjct: 162 E-SRDEIKELIEKQKVQKESVKSHESELSSVMSSEIL 197
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 31.1 bits (67), Expect = 0.45
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 26 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 85
+S S +++ L EY E + ++A+E RL K DEE + K A+
Sbjct: 1001 ESMASVLQEKLREYSEELDQMSPNLRAIERLETVETRLAKLDEEFAAARKAAK------- 1053
Query: 86 NVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPS 125
N + R + +K++ L++ + + E + ++ + K P+
Sbjct: 1054 NAKERFNAVKQKRLQKFQAAFSHISEQIDPIYKELTKSPA 1093
Score = 29.1 bits (62), Expect = 1.8
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 95 KRRELERLRHLATKQFELTNDLHVNMGKVP-----SSEHLDHTNAHTFEIEDLKKLIMKT 149
++R+ +L +L K F L + NM +V S + ++ + +T EIE LK+
Sbjct: 224 EKRDSAQLVYLLWKLFHLEKSISSNMAEVTRLKADSIQLIERRDENTKEIEKLKEKEGSI 283
Query: 150 TSDLEAADKKRREEFK 165
+L A D+K R++ K
Sbjct: 284 RRNLLAFDRKVRKQEK 299
>SPAC144.15c |cog1||Golgi transport complex subunit Cog1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 701
Score = 31.1 bits (67), Expect = 0.45
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 118 VNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEK 175
+N+ ++ +++ +DH +TF++E + L T + E D + E +Q EF K
Sbjct: 609 LNLERLKAAKSMDHMKQNTFDMEFINYLSDFTNNPREVIDYQHFIELIDLHVQDEFSK 666
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 30.3 bits (65), Expect = 0.79
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 49 VVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATK 108
V ++L+ R ++E+ D+E ++ ++ ++L + E +++ +RHL ++
Sbjct: 225 VHESLKRISCIRSKVEELDQEITETARLQDEL--------FKSTEEYEQQMITIRHLESQ 276
Query: 109 QFELT---NDLHVNMGKVP-SSEHLD--HTN--AHTFEIEDLKKLIMKTTSDLEAADKKR 160
+ NDL M SSE L+ H+N E ++L K + K SDLE+ K R
Sbjct: 277 SDIINTTINDLKSQMTITDESSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSR 336
Query: 161 REEFKTY-----EIQKEFEKHQKME 180
RE + +IQ E E +K++
Sbjct: 337 RELLEKLTGDLGKIQGEIESLEKLK 361
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 29.9 bits (64), Expect = 1.0
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 234 FMMHDVDGNGVWDANEVKALFVKELDKFYGPGGPNKDLHXXXXXXXXXXXHVFKENDKNH 293
F ++D+D NG+ +E+ ++ +D Y G L +F DKN
Sbjct: 105 FQLYDLDNNGLISYDEM----LRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNK 160
Query: 294 DGLIDFHEFMMATQR 308
DG + EF ++R
Sbjct: 161 DGQLTLEEFCEGSKR 175
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 29.9 bits (64), Expect = 1.0
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 34 DDLEEYMEYHRYLKEVVQALESDPDFRERLEKADE-EDVKSGKIAEQLDFVNHNVRTRLD 92
DDL++ + R L + + D E+L+ A+E D+ A L F + R ++
Sbjct: 364 DDLQQSIAMQRRLAQKRAKILKPEDVAEQLQNAEEVTDMTDSDTASGLIF--DDTRAFVN 421
Query: 93 EIKRRE-LERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTS 151
IK E E L + + FE + DL+ + + S + +NA +ED I T
Sbjct: 422 SIKETENREALGSINEQAFEDSKDLN-DTNSITGSSPTEESNA---LVEDTSVDISATLE 477
Query: 152 DLEAADKKRREE 163
+ + +E
Sbjct: 478 EANTQQENAEDE 489
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 29.5 bits (63), Expect = 1.4
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 13/146 (8%)
Query: 30 SEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGK-----IAEQLDFVN 84
S++ D+L+EY R LK ++ + + +LE E++ + K +A+Q +F
Sbjct: 552 SKLTDNLQEYRNTVRELKLDLEKSKKKNEDLSKLEVEKVEEIANLKKELTHLAKQQEFGF 611
Query: 85 HNVRTRLDEIKRRELE-RLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLK 143
V+ E +L+ +L K ++LT L + + NA TF E K
Sbjct: 612 KYVQ----EFSNEDLQGKLIEANEKNYKLTQLLKTQKEDADFITN-QYQNASTFAAEQSK 666
Query: 144 KL--IMKTTSDLEAADKKRREEFKTY 167
++ + L+A + K EE K Y
Sbjct: 667 EVAKLQAECKRLQAINSKVMEEVKVY 692
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/132 (18%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Query: 26 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 85
++E + +K EY R+ +E++ +L S + E V + E+L+
Sbjct: 1282 QTEKAAVKKLENSNEEYKRHNQEILLSLNSSTSTSSDASRLKNELVSKENLIEELNQEIG 1341
Query: 86 NVRTRLDEIKRR--ELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLK 143
++++ L+ +K + +LE R + E + + +++ N + ++
Sbjct: 1342 HLKSELETVKSKSEDLENERAQNQSKIEQLELKNTKLAAAWRTKYEQVVNKSLEKHNQIR 1401
Query: 144 KLIMKTTSDLEA 155
+ + + TS+LEA
Sbjct: 1402 QQLSQKTSELEA 1413
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 5 VTIGC---MIVFLHCSYAPPVTPDKSED---SEIKDDLEEYMEYHRYLKEVVQALESDP 57
+T+G +I+ L CSY V P+ S D + K D E+ +YH+ V+ +E+ P
Sbjct: 411 ITVGAIANLILDLKCSYGTEVVPEVSTDGTETATKKDEEDAEKYHQSKDVVLGDVETLP 469
>SPAC26H5.07c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 505
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 317 WKPIEENQVYTQAEYQEYERRKLEEIRYLQQRGLVDPHGRPL-PGSQHQIHQALQEFYA 374
W+P E N+ + +E + + E L L H RP P + H IH + E A
Sbjct: 424 WRPTENNRRFAMSEQVAQDVDEFEMTSSLSNDSLHLHHERPTSPANPHIIHGSADEHQA 482
>SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 652
Score = 28.7 bits (61), Expect = 2.4
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 42 YHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEI-KRRELE 100
+ R K V +A+ S P+ E++EK+ + V GKI ++ V H V + L I KR+ E
Sbjct: 431 FKRDAKAVEEAMISWPE-SEKVEKSAQL-VAEGKIIVNVNGVEHTVESDLVTIEKRKHTE 488
Query: 101 RLR 103
+R
Sbjct: 489 HIR 491
>SPCC613.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 189
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 220 KQDHMDQQFDPKVFFMMHDVDGNGVWDANEVKALF 254
K +H ++ + FF +HD+ G W ++ +L+
Sbjct: 28 KDEHHIDKYTDESFFRLHDLGKKGYWSDQDILSLY 62
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 25 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 84
DK E ++ K+ ++ + A + + + E+ EK D +DVK KI E D N
Sbjct: 506 DKEEKTDSKETADKVEQTDSKDTNEKPAKDDNKEANEKAEKVDSKDVKE-KIEEAADLQN 564
Query: 85 HNVRT 89
T
Sbjct: 565 SGKET 569
>SPBC2A9.11c ||SPBC2D10.01c|nuclear export
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 27.9 bits (59), Expect = 4.2
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 92 DEIKRRELE-RLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTT 150
+E + ELE ++ L ++Q+E+ N +V+ + TNA IED K+ + K
Sbjct: 25 EENSQPELEDEVKLLISRQYEMGNIWNVDWSSMNLESLRKLTNAQNTIIEDKKRKVEKPV 84
Query: 151 --------SDLEAADKKRREEFKTYEIQKEFEKHQKMEEMGDN 185
S+ + DKK + + +E + + K EE+ N
Sbjct: 85 SGNQFSLLSEEDEVDKKEKRR-RRFENGSRSQNNAKSEELKVN 126
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 119 NMGKVPSSEHLDHTNAHTFEIEDLKKLIMK-TTSDLEAADKKRREEFKTYEIQKEFEKHQ 177
N ++ E+ D +N E+ED + + ++SD +A ++R E T + EK +
Sbjct: 148 NSHELSDEENSDSSNEREEEVEDDNRSVESYSSSDYQARSRRRFSEETTQRRAEIKEKRK 207
Query: 178 KMEE 181
K +E
Sbjct: 208 KRKE 211
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 5.6
Identities = 19/100 (19%), Positives = 40/100 (40%)
Query: 35 DLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEI 94
D++ + K+V A +++ +R + +EE + A + E
Sbjct: 335 DVDSRQQLAMLTKKVRDAEDAEEKYRISCHQREEEITRCATQAYDAVKAAEKRNETIAEA 394
Query: 95 KRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNA 134
R + + L +K +T DL+ P +LD+++A
Sbjct: 395 ARAKENEAKDLYSKAESITQDLNAKRSHPPQPANLDYSSA 434
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 27.5 bits (58), Expect = 5.6
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 25 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 84
++ + E++ + + LK ++ S + ++R K +E+ ++ + D +
Sbjct: 95 ERKKRKELESAKNNLLNVYDSLKMQKASVSSMVNRKQRAAK-EEQKIQEEFERQITDLLE 153
Query: 85 HNVRTRLDEIKRRELERLR-HLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEI---- 139
+ +L EI+R E E R + T+Q+E + + +E L H EI
Sbjct: 154 EQQQLKL-EIERLEAETERANSETEQYEKQKEALEEEYEELRNECLKHDPQLDAEIRTLQ 212
Query: 140 ---EDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEKH--QKMEEMGD 184
E++++ + K SD + ADK ++ +KE H +K E+ D
Sbjct: 213 DTFEEVERTLTKQVSDAKIADKPLKDSMFNSNSEKEKIMHALEKAEKDAD 262
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 25 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEE 69
+ ++DS + EE Y K++ E DP+F + LE+ D++
Sbjct: 102 ENTQDSTSESSEEEEDGLESYQKQLEGLKEKDPEFYKFLEQNDQD 146
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/46 (23%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 130 DHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEK 175
DHT+ H F++++LK L + + A+ + ++++ + Q F +
Sbjct: 113 DHTDLHDFDVKNLKSLSLPS----HVAEDRTAQQYRQNKYQLHFSR 154
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 7.4
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 83 VNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDL 142
+N +R +RR L+++ L + +F TNDL+ P D +N ++ +E L
Sbjct: 1712 INTILRRNNSRGRRRMLQQMSPLKSNKFSGTNDLNFQQATKP-----DGSNKSSY-MERL 1765
Query: 143 KKLIMKTTSDLEAADKKR 160
+KL + L++ K+
Sbjct: 1766 EKLKQNSERHLQSVGGKK 1783
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.134 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,817,355
Number of Sequences: 5004
Number of extensions: 76235
Number of successful extensions: 332
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 319
Number of HSP's gapped (non-prelim): 29
length of query: 596
length of database: 2,362,478
effective HSP length: 77
effective length of query: 519
effective length of database: 1,977,170
effective search space: 1026151230
effective search space used: 1026151230
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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