BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000647-TA|BGIBMGA000647-PA|IPR002048|Calcium-binding
EF-hand, IPR011047|Quinonprotein alcohol dehydrogenase-like
(596 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 29 0.46
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 27 1.1
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 26 3.3
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 25 4.3
DQ974168-1|ABJ52808.1| 447|Anopheles gambiae serpin 9 protein. 25 5.7
AY341214-1|AAR13778.1| 260|Anopheles gambiae SRPN9 protein. 25 5.7
AY341211-1|AAR13775.1| 260|Anopheles gambiae SRPN9 protein. 25 5.7
AY341210-1|AAR13774.1| 260|Anopheles gambiae SRPN9 protein. 25 5.7
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 25 7.5
AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein prot... 25 7.5
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 25 7.5
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 7.5
CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative calcium/c... 24 10.0
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 28.7 bits (61), Expect = 0.46
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 93 EIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSD 152
E+ + +LE L L F ++L + ++ + E+ +K I K +D
Sbjct: 822 EVTKNKLENL--LTNNLFRRKDELVQALQEISVEDRKRQLTNCRNEVVATEKRIKKVLTD 879
Query: 153 LEAADKKRREEFKTYE---------IQKEFEKHQKMEEMG 183
E D+K E K + IQKE E +K+EE G
Sbjct: 880 TEEVDRKLSEALKQQKTLQKELESWIQKEKEAQEKLEEDG 919
Score = 25.0 bits (52), Expect = 5.7
Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 10/133 (7%)
Query: 145 LIMKTTSDLEAADKKRR----EEFKTYEIQKEFEK-HQKMEEMGDNXXXXXXXXXXXXXX 199
LI++TT+D E D +R +EF I+ F + +M EM N
Sbjct: 1054 LILRTTNDQEGNDMEREVETSDEFTGIGIRVSFTQVDAEMREM--NQLSGGQKSLVALAL 1111
Query: 200 XXXXXXXXPGSKQQLEEVWEKQDHMDQQFDPKVFFMMHDVDGNGVWDANEVKALFVKELD 259
P +E+ +D Q V M+H+ + + +++
Sbjct: 1112 IFAIQKCDPAPFYLFDEI---DQALDAQHRSAVADMIHEQSDRAQFITTTFRPELMEKAH 1168
Query: 260 KFYGPGGPNKDLH 272
KFYG NK H
Sbjct: 1169 KFYGVRFRNKVSH 1181
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 27.5 bits (58), Expect = 1.1
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 318 KPIEENQVYTQAEYQEYERRKLEEIRYLQQRGLVDPHGRPLPGSQHQIHQALQE 371
KP + Q Q + ++ +R+ + ++ QQ+ P + + GSQ Q + +Q+
Sbjct: 277 KPRSQQQPQQQQQQRQLQRQAVGIAQHQQQQQQRQPQRQAVAGSQQQQQERMQQ 330
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein
L8 protein.
Length = 261
Score = 25.8 bits (54), Expect = 3.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 38 EYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQL 80
+Y E H YLK VV+ + DP L + D ++++QL
Sbjct: 33 DYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDPYRFRLSKQL 75
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 25.4 bits (53), Expect = 4.3
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 22 VTPDKSEDSEIKDDLEEYMEYHRY-LKEVVQALESDPDFRERLEKADEEDVKSGKIAEQL 80
V+P + E + E+ EY R K++ E+ + +K + E ++ K +
Sbjct: 91 VSPAEKETEVLCQQEREFREYLRNGSKKMTSTWENT--VQNIRDKKEAERLRRDKAKVEE 148
Query: 81 DFVNHNVRTRLDEIKRREL 99
D ++ DEIKRREL
Sbjct: 149 DQRHYRELKAADEIKRREL 167
>DQ974168-1|ABJ52808.1| 447|Anopheles gambiae serpin 9 protein.
Length = 447
Score = 25.0 bits (52), Expect = 5.7
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 229 DPKVFFMMHDVDGNGVWDANEVKALFVKELDKFYGPGGPNKD 270
D + F M V+G ANE + EL GPG N D
Sbjct: 239 DQQKFVDMMHVEGTFSHAANEKLGCHILELPYSAGPGADNAD 280
>AY341214-1|AAR13778.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 25.0 bits (52), Expect = 5.7
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 229 DPKVFFMMHDVDGNGVWDANEVKALFVKELDKFYGPGGPNKD 270
D + F M V+G ANE + EL GPG N D
Sbjct: 113 DQQKFVDMMHVEGTFSHAANEKLGCHILELPYSAGPGADNAD 154
>AY341211-1|AAR13775.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 25.0 bits (52), Expect = 5.7
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 229 DPKVFFMMHDVDGNGVWDANEVKALFVKELDKFYGPGGPNKD 270
D + F M V+G ANE + EL GPG N D
Sbjct: 113 DQQKFVDMMHVEGTFSHAANEKLGCHILELPYSAGPGADNAD 154
>AY341210-1|AAR13774.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 25.0 bits (52), Expect = 5.7
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 229 DPKVFFMMHDVDGNGVWDANEVKALFVKELDKFYGPGGPNKD 270
D + F M V+G ANE + EL GPG N D
Sbjct: 113 DQQKFVDMMHVEGTFSHAANEKLGCHILELPYSAGPGADNAD 154
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 24.6 bits (51), Expect = 7.5
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 307 QRADFNQDEGWKPIEENQVYTQAEYQEYERRKLEEIRYLQQR 348
Q+ NQ W+ ++ Q + Q E Q+ +R + + ++ +Q+
Sbjct: 250 QQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQNQQHQRQQ 291
>AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein
protein.
Length = 385
Score = 24.6 bits (51), Expect = 7.5
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 221 QDHMDQQFDPKVFFMMHDVDGNGVWDANEVKALFVKELD 259
+ ++ F F ++++ DG + ++VKAL+ LD
Sbjct: 200 ESYLGALFAADAFHVVYEADGKTPLNESDVKALYTTMLD 238
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 24.6 bits (51), Expect = 7.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 105 LATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLK 143
LA T + N G + SE + HTF ++DLK
Sbjct: 680 LAMNPLSRTLNQQCNFGYLLKSEEISTRITHTFFMDDLK 718
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 24.6 bits (51), Expect = 7.5
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 93 EIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIE 140
E +RRE+ER R ++ + + ++ +PS E + + T E E
Sbjct: 1190 ERRRREMERTRRQRQRRARDSQAITIHFSPLPSDEIQERRSTLTAEEE 1237
>CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative
calcium/calmodulin-dependentprotein kinase, CAKI
protein.
Length = 872
Score = 24.2 bits (50), Expect = 10.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 325 VYTQAEYQEYERRKLEEIRYLQQRGLVDPHGRP 357
VY++A Y R+ LE +RY + ++ RP
Sbjct: 91 VYSEAVACHYLRQILEALRYCHENDIIHRDVRP 123
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.316 0.134 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,700
Number of Sequences: 2123
Number of extensions: 16188
Number of successful extensions: 60
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 45
Number of HSP's gapped (non-prelim): 19
length of query: 596
length of database: 516,269
effective HSP length: 68
effective length of query: 528
effective length of database: 371,905
effective search space: 196365840
effective search space used: 196365840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)
- SilkBase 1999-2023 -