Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000646-TA|BGIBMGA000646-PA|IPR006751|TAFII55 protein
conserved region
(386 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 38 0.010
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 36 0.056
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 36 0.056
SB_25165| Best HMM Match : Prominin (HMM E-Value=1.1e-05) 35 0.097
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.097
SB_46152| Best HMM Match : DUF241 (HMM E-Value=0.62) 35 0.13
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_38475| Best HMM Match : ASC (HMM E-Value=3.1e-14) 33 0.39
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 33 0.52
SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23) 32 0.69
SB_44228| Best HMM Match : LMP (HMM E-Value=0.11) 32 0.91
SB_49241| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_17366| Best HMM Match : Filament (HMM E-Value=0.14) 31 1.2
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 30 2.8
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 30 2.8
SB_42663| Best HMM Match : LMP (HMM E-Value=0.42) 30 2.8
SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25) 30 2.8
SB_31141| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_26242| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.8e-15) 30 3.7
SB_7604| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 30 3.7
SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) 29 4.8
SB_9721| Best HMM Match : Filament (HMM E-Value=0.2) 29 4.8
SB_50076| Best HMM Match : Filament (HMM E-Value=0.15) 29 4.8
SB_47302| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39) 29 4.8
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 29 6.4
SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_48008| Best HMM Match : M (HMM E-Value=0.0068) 29 6.4
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_23681| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_14954| Best HMM Match : Pox_TAP (HMM E-Value=9.3) 29 6.4
SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5) 29 8.5
SB_43701| Best HMM Match : ubiquitin (HMM E-Value=0.003) 29 8.5
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 29 8.5
SB_29026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
SB_34355| Best HMM Match : DUF827 (HMM E-Value=0.011) 29 8.5
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 38.3 bits (85), Expect = 0.010
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 261 SGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMA 320
+ T +SL SL+ P+ S + + S + S+A+C +SS+ D E +EK +A
Sbjct: 1399 NSKKTGRSL-ISLSDKRPAPMNITSRLSKISPLRALDSNAECAVSSDSDSELEDEKKPLA 1457
Query: 321 LRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDNLHTLNQDIMYKEMEYQGLLTL 380
+Q+K+ K + Q+ +E + E A ++ F N + + + + TL
Sbjct: 1458 SFCSQVKMH----KTKEQQCNVEKTLPEESAQKRTFVKNRTDMASSLNIRRRHLEDSKTL 1513
Query: 381 QNSE 384
+ S+
Sbjct: 1514 EKSK 1517
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 35.9 bits (79), Expect = 0.056
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 217 HATKPESSNIVDIFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKS 276
H PES N D GG + + +T + +N L + NS +Q G+ T+S
Sbjct: 92 HENVPESRNYTDQQDGGRARAPGSRDTSH---RNGHLYS-----TRNSVDQFDGQVPTRS 143
Query: 277 SALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQR 336
+ PI +++S ++ ++ D+ E+ L EV ELKQ+
Sbjct: 144 N--PIHVNERVYESRNAITQQEAPGLEIDFVDESVRRLEQQKQTL-----DYEVRELKQK 196
Query: 337 RQKIKLEISGIENLALRQ 354
+Q ++LE+ E RQ
Sbjct: 197 KQNLELELKNAEKKGSRQ 214
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 35.9 bits (79), Expect = 0.056
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 315 EKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDNLHTLNQDIMYKEMEY 374
+K+ MA + + + E+D+L RRQK LE ++ +R QD L+ + + ++ KE E
Sbjct: 80 KKEHMA-EVRKFQREIDDL--RRQKRSLEDQLRDSKGDNKRLQDELNMVRRRLLEKETEN 136
Query: 375 QGLLTLQNSED 385
+ LL NS++
Sbjct: 137 ESLLRELNSKN 147
>SB_25165| Best HMM Match : Prominin (HMM E-Value=1.1e-05)
Length = 726
Score = 35.1 bits (77), Expect = 0.097
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 242 ETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTS 298
ET++ +L N ++++ D ++ N + QSL + L +S I F S + Q+ +G++ ++
Sbjct: 471 ETIDKELDNLKVNLTDQKILNNDSRQSL-KKLNESGVDDINFDSFLNQTRKGITKSN 526
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 35.1 bits (77), Expect = 0.097
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 289 QSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIE 348
+ + GV SD S E + + EK L ++LK E L++ +++K ++ E
Sbjct: 1866 KGTTGVDDESDEPA--SEEAEEKTKEEKLKSMLDSSKLKTEAKILREETERLKAQLE--E 1921
Query: 349 NLALRQRFQDNLHTLNQDI 367
+ L++ QD LHT ++
Sbjct: 1922 TMNLKEELQDKLHTAEHEL 1940
>SB_46152| Best HMM Match : DUF241 (HMM E-Value=0.62)
Length = 1110
Score = 34.7 bits (76), Expect = 0.13
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 269 LGESLTKSSALPIE---FGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMAL---R 322
LG+ T+ +L +E GSH + ++S+ C+ S++ D N+ DD + +
Sbjct: 621 LGKEFTEEQSLSVEDQVLGSHNTSQTLTLTSSGSQSCETSTQTDDGLENKADDESASEEK 680
Query: 323 INQLKLEVDELK 334
+N + +E +++K
Sbjct: 681 LNSVTMEKEKIK 692
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 33.1 bits (72), Expect = 0.39
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 228 DIFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQS---LGESLTKSSALPIEFG 284
++F G S+ + V L+N++ ++ D + + + ++ L L+++ F
Sbjct: 1784 EVFIGNESNGKILLRNLEVQLENAKHALLDEQKAKSDALENFEKLRVKLSEAQNQNATFS 1843
Query: 285 SHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKL----EVDELKQRRQKI 340
M + + SS + +C S ED EKD + N+L+ ++++L + KI
Sbjct: 1844 DEMARLKEQ-SSAMEVRCSKSEEDIASLREEKDMLTTMFNELETIYNSKIEDLNLAKSKI 1902
Query: 341 -KLE 343
KLE
Sbjct: 1903 EKLE 1906
>SB_38475| Best HMM Match : ASC (HMM E-Value=3.1e-14)
Length = 421
Score = 33.1 bits (72), Expect = 0.39
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 308 DDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDN---LHTLN 364
D + ++D + + Q ++EV+EL+ + Q + + +E+ R ++ D+ L L+
Sbjct: 329 DSSQSQYDQDQLYETVRQREMEVEELQMQNQNLLQRLEAVESETSRAQYHDSMQKLDNLS 388
Query: 365 QDIMYKEMEYQGLL 378
+ KE E + L+
Sbjct: 389 DLVSRKEKEIEELI 402
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 32.7 bits (71), Expect = 0.52
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 298 SDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQ 357
SD + +L + D ++ E D + R +L EV+ LK+ ++IK + + ++ +
Sbjct: 1301 SDLQKELENRPDDDWKEEVDGLKSRNEELLKEVESLKENLKEIKDGSQTEKENLIEEKER 1360
Query: 358 DNLHTLNQDIMYK---EMEYQGLLTLQNSED 385
+ L+ +N+ + K E++ Q LT + D
Sbjct: 1361 EKLNAMNELLNAKAEVEVKLQEQLTANDELD 1391
>SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23)
Length = 1189
Score = 32.3 bits (70), Expect = 0.69
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 290 SSQGVSSTSDAKC-DLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIE 348
SS +T K D +SE S ++ ++ + ++KL V+ K +K+ E E
Sbjct: 507 SSSETKTTRPTKIRDTASEALQPISEDQPEVQPSLAKIKLHVEVQKMADEKLMTEKPPKE 566
Query: 349 NL-ALRQRFQDNLHTLNQDIM 368
L R+ NLHT NQ+I+
Sbjct: 567 ELHPSREDGDSNLHTANQEIL 587
>SB_44228| Best HMM Match : LMP (HMM E-Value=0.11)
Length = 276
Score = 31.9 bits (69), Expect = 0.91
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Query: 240 EDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSD 299
+ + V DLQ S +TN+SL L ++ + + Q Q + S
Sbjct: 141 QKDAVIQDLQQGGESSVSELREARATNESLVSELRNANEDKVTLKEQLKQMEQAIESQRQ 200
Query: 300 AKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDN 359
D E ++ ++ +I L E +E Q +K +L+ + E++ + +
Sbjct: 201 RHSDEIQRISAEHEHQCAKLSQKIESLSSEQEEAIQDLEK-QLKKANKESVKMELALAEK 259
Query: 360 LHTLNQD 366
TLN++
Sbjct: 260 EDTLNEN 266
>SB_49241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 328 LEVDELKQRRQKIKLEISGIENLALRQRFQDNLHTLNQDIM 368
+E ++KQR ++I LEI I+ L+LRQ+ D + + ++D +
Sbjct: 113 VEAMKIKQRLKEINLEIVEIKMLSLRQQTADYMSSHSEDFL 153
>SB_17366| Best HMM Match : Filament (HMM E-Value=0.14)
Length = 306
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 301 KCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIE-NLALRQRFQDN 359
K L ++ ++KD M +++L+ EV L R++ ++E + +E N LRQ F+
Sbjct: 13 KAKLEAKYQNLLEHDKDAMESTMSELREEVILL--RKENSQIESTFVEKNAELRQHFEIE 70
Query: 360 LHTLNQDIMYKEMEYQGLLTLQNSE 384
LN+ +++++ E + L + S+
Sbjct: 71 KEELNRKLIHEKEELRYSLEAEFSQ 95
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 30.7 bits (66), Expect = 2.1
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 7/142 (4%)
Query: 234 VSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQG 293
V ++ E E + + N+ ++ D R N ES++ SAL I S SS
Sbjct: 1875 VENNRREKERLEEQILNASRTIDDIRKYSNRD-----ESMSPDSALGISLESLGDLSSGP 1929
Query: 294 VSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALR 353
S SD L E D +FS E D L + + R ++I +E ++ R
Sbjct: 1930 NSPNSDVSDQLFDEGDLKFSAEHDQKGLLCKMPTMIENFRAVVRDNEAMKIKLLELVSYR 1989
Query: 354 QRFQDNL--HTLNQDIMYKEME 373
Q+ + L +T D + K+++
Sbjct: 1990 QKSDNQLQHYTSLSDNLQKDIK 2011
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 30.3 bits (65), Expect = 2.8
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 299 DAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQD 358
++K + S + + L+I QL+ E+ ELKQ+R + +I+ IE + +D
Sbjct: 526 ESKLEASESKRQILDEQHQSLELKIQQLQEELFELKQQRDSFEHQITEIE--VTHSKNKD 583
Query: 359 NLHTLNQDIMYKEMEYQGL 377
L+ ++++ GL
Sbjct: 584 ELNRSRKEMLEHRGAVDGL 602
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 30.3 bits (65), Expect = 2.8
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 245 NVDLQNSRLSVCDSRLSGNSTNQSLGESL-TKSSALP--IEFGSHMFQSSQGVSSTSDAK 301
++D +N +L +R S +S LG+SL KS AL H+ + + + AK
Sbjct: 246 HLDAENKQLK---ARHSDSSNLNELGKSLKVKSEALEGLNRLNEHLEREVTNLRNQLAAK 302
Query: 302 CDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIEN 349
D S ++D + + Q ++EV+EL+ + Q + + +E+
Sbjct: 303 GDSSQSQ-----YDQDQLYETVRQREMEVEELQMQNQNLLQRLEAVES 345
>SB_42663| Best HMM Match : LMP (HMM E-Value=0.42)
Length = 251
Score = 30.3 bits (65), Expect = 2.8
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 3/118 (2%)
Query: 245 NVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKC-D 303
N++++ SR + RL +T + S+ + + ++ + C +
Sbjct: 128 NLEIEISRANDEVQRLRDENTELGVTHSMIRDEMREMAVAMRCYEGLMTDLRAKLSDCVE 187
Query: 304 LSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENL--ALRQRFQDN 359
+ E DG F + + R N L VD+L +R I E+ N R + QDN
Sbjct: 188 ANDECDGSFEGTLESVEQRSNALVRLVDKLTKRLSDITSELQQATNQMDKYRSQIQDN 245
>SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25)
Length = 1137
Score = 30.3 bits (65), Expect = 2.8
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 237 SDFEDETVNVDLQNS--RL--SVCDSRLSGNSTNQSLG---ESLTKSSALPIEFGSHMFQ 289
S+ E+E ++V+ S RL S+ DSR+ +++ ++ +S T S EF S + Q
Sbjct: 1009 SEEEEEMIDVEGYESDDRLFRSISDSRIDMDTSIANISATADSETMVSVSQNEFESILLQ 1068
Query: 290 SSQGVSSTSDAKCDLSSEDDGEFSNEKDD 318
Q S SD+ D EDD F + +DD
Sbjct: 1069 DLQ--HSDSDSADDDDEEDDFPFGDGEDD 1095
>SB_31141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 30.3 bits (65), Expect = 2.8
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 300 AKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLAL-RQRFQD 358
A CDL +ED GE N+ D A R ++ +E E + K K +SGI+ L R D
Sbjct: 32 AVCDLDAEDLGEVFNKLD--ADRDGRISIE--EFSENFMKFKNVVSGIKQKRLTRTATGD 87
Query: 359 NLHTLNQ 365
+L Q
Sbjct: 88 DLEDFRQ 94
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 30.3 bits (65), Expect = 2.8
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 3/118 (2%)
Query: 245 NVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKC-D 303
N++++ SR + RL +T + S+ + + ++ + C +
Sbjct: 454 NLEIEISRANDEVQRLRDENTELGVTHSMIRDEMREMAVAMRCYEGLMTDLRAKLSDCVE 513
Query: 304 LSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENL--ALRQRFQDN 359
+ E DG F + + R N L VD+L +R I E+ N R + QDN
Sbjct: 514 ANDECDGSFEGTLESVEQRSNALVRLVDKLTKRLSDITSELQQATNQMDKYRSQIQDN 571
>SB_26242| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.8e-15)
Length = 1019
Score = 29.9 bits (64), Expect = 3.7
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Query: 212 RELTLH--ATKPESSN-------IVDIFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSG 262
+E+T+H +T P SS+ D+ GG SDS+ + E + ++ S+ R
Sbjct: 731 KEITIHERSTSPRSSDNESDMTKSTDVLNGGFSDSEEQKEKSESEQEDDTDSIPRLRFRA 790
Query: 263 NST-NQSLGESL-------TKSSALPIEFGSHMFQSSQGVSSTSDA-KCDLSSEDDGEFS 313
N T + S+ +S+ T+++ P+ S SQ TS++ D SE+D + S
Sbjct: 791 NETKSSSVSQSMQNKKMYRTETNTPPVAHSSPNEGGSQLDQDTSNSTPIDDLSENDVDPS 850
Query: 314 N 314
N
Sbjct: 851 N 851
>SB_7604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/101 (19%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 260 LSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDM 319
+SG ++ G S ++ + + ++ GV++ +D + + E+DG + +
Sbjct: 1 MSGRGKGKTKGTKSKTRSDFEVDL-TDVGAANAGVNNNND-ETSILVENDGPLKCNMECI 58
Query: 320 ALRINQLKLEVDELKQRR-QKIKLEISGIENLALRQRFQDN 359
+ +K+ ++ +K +I+++ G + +LRQ +QDN
Sbjct: 59 KTEVYGIKVRLEGIKNLLISQIRMKAYGKKTRSLRQSYQDN 99
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 29.9 bits (64), Expect = 3.7
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 289 QSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIE 348
QS + S AK S+ + + + ++ A + + LK E+DE K + K+K ++ +
Sbjct: 791 QSGERDSEDLGAKLAASNARNAKLETQLNNTARQKSLLKSELDEEKAKATKLKKDMQAAQ 850
Query: 349 NLALRQR 355
N A R
Sbjct: 851 NEAAEAR 857
>SB_48596| Best HMM Match : Filament (HMM E-Value=0.23)
Length = 458
Score = 29.5 bits (63), Expect = 4.8
Identities = 23/120 (19%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 234 VSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQG 293
+ D++ ET+ + + + V D + S +S+ + K + E F +
Sbjct: 164 IRDAEDSKETLRKENLHVKRQVKDLEMEKQSLEKSVSDLREKVKLVENEKSELKFAFDE- 222
Query: 294 VSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALR 353
D+K + E+ +NE +DM R N++ E E+++ ++ +I + L+
Sbjct: 223 ----LDSKYRVCDENRSSITNEYEDMRARFNEVDTERQEIRRELKEALRQIKMLSGECLQ 278
>SB_9721| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 216
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 300 AKCDLSSEDDGEFSNEKDDMALRINQLKL---EVDELKQRRQKIKLEISGIENLALRQRF 356
++ D + G+F EK + +L+L E+ ++ + R K++ EI +RQ
Sbjct: 142 SRVDHLEDSIGDFETEKAKLFTENEELRLANLEIQDVYRERGKLEAEIKTAMEAEIRQLS 201
Query: 357 QDNLHTLNQDIMYKE 371
++N TL ++ Y++
Sbjct: 202 KEN-KTLRGELRYQD 215
>SB_50076| Best HMM Match : Filament (HMM E-Value=0.15)
Length = 380
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 301 KCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDNL 360
K ++ DG + +K D+ + +L+ E+ + K+R ++ ++ +EN A Q +
Sbjct: 171 KAKYDAQVDG-LNKQKIDLKNTVEKLRAELKKSKERIGGLERDV--MENQARANALQQEV 227
Query: 361 HTLNQDI 367
TLN+DI
Sbjct: 228 GTLNRDI 234
>SB_47302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 29.5 bits (63), Expect = 4.8
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 222 ESSNIVDIFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPI 281
E N D + GG ++ D +++ +N D + D GN + GE +
Sbjct: 59 EGDNPDDDYQGG-NEKDDDNDDINGDDKVGSNENDDDGEHGNEKDDD-GEHGNEKDD-DG 115
Query: 282 EFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDD 318
E G+ G D + D +DDGE ++KDD
Sbjct: 116 EHGNEKDDGEHGNEKDDDEEHDDKKDDDGEHGDKKDD 152
>SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39)
Length = 738
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 321 LRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDNLHTLNQDIMYKEMEYQGL 377
L I +++LE D+ R++ ++S E QRF+D L +N I E + L
Sbjct: 583 LEIQRIQLETDKESLAREEESFDVSSKEWQRENQRFEDLLSDVNGSITKTEQTIKDL 639
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 30 LRELLKSGENLKNRLTIQIDNDMRRG-EVRLDHWLMHA 66
LR+ K LKNRL + IDN+ R G E++ MHA
Sbjct: 16 LRKKEKEVYELKNRLEVAIDNNERLGEEIKAKDAKMHA 53
>SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1520
Score = 29.1 bits (62), Expect = 6.4
Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 17/137 (12%)
Query: 231 GGGVSDSDFEDETVNVDLQNSRLSVC-----DSRLSGNSTNQSLGESLTKSSALPIE-FG 284
G + D +D+ + S C DS +SGNS N+S + L AL +
Sbjct: 797 GAAAENEDDDDDACEPVTGQNETSDCGEDDYDSDVSGNSGNESNEDVLCPEKALHLSATH 856
Query: 285 SHMFQSS---QGVSSTSDAKCDLSSEDDG--------EFSNEKDDMALRINQLKLEVDEL 333
H + +S Q STSD+ L +E ++S N E DE+
Sbjct: 857 GHYYAASPEEQKTLSTSDSDSCLGTESGSAGMRITRVDYSAGLVSYGDSFNNADSESDEI 916
Query: 334 KQRRQKIKLEISGIENL 350
Q + K + I G+ +
Sbjct: 917 LQEKCKARYPIEGVAQI 933
>SB_48008| Best HMM Match : M (HMM E-Value=0.0068)
Length = 1068
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 291 SQGVSSTSDAKCDLSSEDDG--EFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIE 348
S+ V D K L D + + ++L +N L++E +EL++R + IE
Sbjct: 12 SEAVQEIKDHKAQLQIRDQNIESLTASVNKLSLAVNDLEMENEELRERLGMDPRDRLDIE 71
Query: 349 NLALRQRFQDNLHTLNQDIMYKEME 373
+ +++ + ++ KE+E
Sbjct: 72 EIKQKRKVKKEQSAALNRVLVKEIE 96
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 29.1 bits (62), Expect = 6.4
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 8/175 (4%)
Query: 219 TKPESSNIVDIFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSA 278
TKP S N++ + S + + + S + E+L K
Sbjct: 286 TKPRSGNLMTSSTEQLPASSADPMSSESWSSSGEYETGSSYPEDEEMSSDAAEALDKPGE 345
Query: 279 LP-IEFGSHMFQSSQGVSSTSDAKCDLSSEDD-GEFSNEKDDMALRINQLKLEVDELKQR 336
LP + Q +S T K S + + E DM I ++K DEL++
Sbjct: 346 LPYFSTPPGVQQKPPALSPTLMRKVMTSRVNKINQLDKEVIDMGGEITKIKKPNDELRKT 405
Query: 337 RQKIKLEISGIE----NLALRQRFQD-NLHTLNQDIM-YKEMEYQGLLTLQNSED 385
++K++++ +E +L ++ + +D + LN+ + YK E GL +SED
Sbjct: 406 KKKMQVQYEKLEHQLDDLKVQLKRKDVVIADLNKVVEDYKRKESYGLFRESSSED 460
>SB_23681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 29.1 bits (62), Expect = 6.4
Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 7/115 (6%)
Query: 236 DSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLT--KSSALPIEFGSHMFQSSQG 293
D +ED + L RL +C R + G S K++ I S S+
Sbjct: 36 DFKYEDYKRDTGLSRPRLFLCSRRRISGYADSEAGPSFEFDKAALADILGTSREDNQSEL 95
Query: 294 VSSTSDAKCDLSS-----EDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLE 343
+ ++ + K E+ EKD + L Q + +E++Q+R++ L+
Sbjct: 96 IGTSEERKAIFKEQLEQLEESSRIDKEKDRLRLEEEQELTKQEEIRQKRRRRVLD 150
>SB_14954| Best HMM Match : Pox_TAP (HMM E-Value=9.3)
Length = 432
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 307 EDDGE-FSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDNLHTLNQ 365
ED+ + F+ E+ DM LR + + ++EL RR+ + E S + L + R ++ L L
Sbjct: 57 EDNSQTFAFEEGDMGLRRDFIDAILEELASRRRGEEFEKSALNALRILSRDKNGLGLLTS 116
Query: 366 D 366
+
Sbjct: 117 E 117
>SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5)
Length = 370
Score = 28.7 bits (61), Expect = 8.5
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 254 SVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHM--FQSSQGVSSTSDAK----CDLSSE 307
S ++ S +S +L ++ K +L E S++ +QS S+ +AK C L
Sbjct: 179 SASENNNSASSQINALDHNIRKCDSLFQELNSYLCKYQSDCSESNDLNAKQKLLCKLCKL 238
Query: 308 DDGEFSNEKDDMALRINQLK 327
EF+N K D+ ++ Q K
Sbjct: 239 IGREFNNAKPDIEAKVTQFK 258
>SB_43701| Best HMM Match : ubiquitin (HMM E-Value=0.003)
Length = 227
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 311 EFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDNLHTLNQDIMYK 370
++ E DD I ++ +V ELK R ++ E+ GI + Q D T+ ++ K
Sbjct: 167 KYDPEADDNMKAIRSVEQQVGELKSRLDQLNAELDGISKTIIDQ--ADASSTVCDKLLKK 224
Query: 371 E 371
E
Sbjct: 225 E 225
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/55 (20%), Positives = 29/55 (52%)
Query: 289 QSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLE 343
+++ + S ++ + ++ E+D + ++QLK ++DEL + K++ E
Sbjct: 2 ENTINTTEPSISELERKQQEFQTIKEERDGLLAEVSQLKKQIDELVSEKDKLQAE 56
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 322 RINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDNLHTLNQ 365
R+N L+ ++DEL+Q ++ E+ E+ A + Q N+H +++
Sbjct: 1634 RVNDLERKLDELQQSNTRLLKELE--ESQASTAKLQRNIHNMDK 1675
>SB_29026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 661
Score = 28.7 bits (61), Expect = 8.5
Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 236 DSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLT--KSSALPIEFGSHMFQSSQG 293
D +ED + L RL +C R + G S K++ I S S+
Sbjct: 161 DFKYEDYKRDTGLSRPRLFLCSRRRISGYADSEAGPSFEFDKAALADILGTSREDNQSEL 220
Query: 294 VSSTSDAKCDLSS-----EDDGEFSNEKDDMALRINQLKLEVDELKQRRQK 339
+ ++ + K E+ EKD + L Q +E++Q+R++
Sbjct: 221 IGTSEERKAIFKEQLEQLEESSRIDKEKDRLRLEEEQELTXAEEIRQKRRR 271
>SB_34355| Best HMM Match : DUF827 (HMM E-Value=0.011)
Length = 501
Score = 28.7 bits (61), Expect = 8.5
Identities = 18/104 (17%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 271 ESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEV 330
E KS +E +++ + S+AKC+ + + + + ++++K++
Sbjct: 197 EQRLKSLEQELEQSQAHYKALKKELEESNAKCEAIERELTNYRQQCKHLENELDRVKVKC 256
Query: 331 DELKQRRQKIKLEISGIENLALRQRFQDNLHTLNQDIMYKEMEY 374
+ LK++ + K E ++N + + + L Q++ +M Y
Sbjct: 257 ESLKEKLENAKRERKSVDN--DNETTTEYIKVLQQELNSAKMNY 298
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 28.7 bits (61), Expect = 8.5
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 215 TLHATKPESSNIVDIFGGGVSDSDFEDETVNVDLQ--NSRLSVCDSRLSGNSTN----QS 268
T T+ ES+N G+S E+ + V+L+ N S+L ++
Sbjct: 1959 TQSPTEGESANSEAELDFGISSLVEENAKLKVELKDINVENEELQSQLELTKEELTRVEA 2018
Query: 269 LGESLTKSSALPIEFGSHMFQSSQGVSSTSD-AKCDLSSEDDGEFSNEKDDMALRINQLK 327
L E+ KSS++ S + Q S G++ D ++ ED G F + +I + +
Sbjct: 2019 LLETYRKSSSITSSTPS-ILQKSPGITVEEDMSQVKHMEEDLGNFLFYVQEELAKIERNQ 2077
Query: 328 LEVDELKQRRQKI 340
+DE Q+R+KI
Sbjct: 2078 TAIDENSQQREKI 2090
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 28.7 bits (61), Expect = 8.5
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 322 RINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQD-NLHTLNQDIMYKEMEYQGL 377
R+++ E ELKQ +K ++ ++ RQR Q+ +L + +Q +M E+E Q L
Sbjct: 1124 RMDRADKENSELKQELALLKTKLKKVKEELARQREQNTDLLSRSQKMMVDELEVQKL 1180
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.131 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,352,218
Number of Sequences: 59808
Number of extensions: 422192
Number of successful extensions: 1258
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1204
Number of HSP's gapped (non-prelim): 83
length of query: 386
length of database: 16,821,457
effective HSP length: 83
effective length of query: 303
effective length of database: 11,857,393
effective search space: 3592790079
effective search space used: 3592790079
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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