Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000646-TA|BGIBMGA000646-PA|IPR006751|TAFII55 protein
conserved region
(386 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132904-12|CAC35845.1| 236|Caenorhabditis elegans Hypothetical... 118 9e-27
Z67755-1|CAA91754.1| 254|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 35 0.085
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 32 0.60
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 32 0.60
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 31 1.0
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 31 1.0
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 31 1.4
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 31 1.4
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 31 1.4
Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical pr... 31 1.8
X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein. 31 1.8
U80836-4|AAB37891.2| 329|Caenorhabditis elegans Hypothetical pr... 30 2.4
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 30 2.4
Z70783-11|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 30 3.2
U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protei... 30 3.2
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 30 3.2
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 30 3.2
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 30 3.2
Z75531-7|CAA99798.2| 316|Caenorhabditis elegans Hypothetical pr... 29 4.2
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 29 4.2
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 29 4.2
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 29 4.2
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z68338-2|CAA92759.1| 411|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical pr... 29 5.6
L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z73427-4|CAA97802.2| 632|Caenorhabditis elegans Hypothetical pr... 29 7.3
U88172-2|AAB42262.1| 368|Caenorhabditis elegans Hypothetical pr... 29 7.3
U42843-5|AAA83597.2| 375|Caenorhabditis elegans Beclin (human a... 29 7.3
Z81077-15|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 28 9.7
Z75952-6|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z70311-10|CAA94377.3| 602|Caenorhabditis elegans Hypothetical p... 28 9.7
Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z68270-6|CAE46688.1| 158|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z68270-5|CAA92570.1| 174|Caenorhabditis elegans Hypothetical pr... 28 9.7
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 28 9.7
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 28 9.7
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 28 9.7
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 28 9.7
>AL132904-12|CAC35845.1| 236|Caenorhabditis elegans Hypothetical
protein Y111B2A.16 protein.
Length = 236
Score = 118 bits (283), Expect = 9e-27
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 3/176 (1%)
Query: 11 PAELESQFILKLPEHPAKILRELLKSGENLKNRLTIQIDNDMRRGEVRLDHWLMHAKIID 70
P + ES +L++PE + ++++S + ++ +++D R VR+ + L++ KI+D
Sbjct: 32 PPDFESHIVLRVPEDCVGRIEKIIQS-DGKHEEFSLNLNSDARNSTVRIGNQLLNGKILD 90
Query: 71 LPTIVESLKTIDGKSFYKTADICQMMICKDGPDQPIAEEEIPTXXXXXXXXXXXXXXLWP 130
LPTI E KT+D KS YK AD+ Q+++C IA +P
Sbjct: 91 LPTITEIHKTLDNKSLYKVADVSQILVCTHDSINSIASSS--EDAAQKAAAAKAKQWQYP 148
Query: 131 HGVTPPTKNVXXXXXXXXXXXXXVEAPEIEKEVKRLLRADNEAISFTWEVIKEEDE 186
HG+TPP K+ ++APE+EKE+KRLLRAD EA S WE+++ E
Sbjct: 149 HGLTPPMKSARKKRFRKTKKKKFMDAPEVEKELKRLLRADLEADSVKWEIVEGNKE 204
>Z67755-1|CAA91754.1| 254|Caenorhabditis elegans Hypothetical
protein F54F7.1 protein.
Length = 254
Score = 64.5 bits (150), Expect = 1e-10
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 3 KDKRELEYPAELESQFILKLPEHPAKILRELLKSGENLKNRLTIQIDNDMRRGEVRLDHW 62
K ++ E E E IL++P + + + +GE L I D R ++RL +
Sbjct: 12 KVAKQHEDNEEWEEHLILRVPPDVVNRMEKAV-NGEIDAEELGINFQEDNRTVQIRLGNQ 70
Query: 63 LMHAKIIDLPTIVESLKTIDGKSFYKTADICQMMICKDGPDQPIAEEE 110
++ AKI+DLPTI E KT+D + YK D+ QM+IC+ P AE +
Sbjct: 71 ILPAKILDLPTINEVHKTLDNSTLYKVTDVSQMIICEGAMPIPKAERK 118
Score = 51.6 bits (118), Expect = 9e-07
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 129 WPHGVTPPTKNVXXXXXXXXXXXXXVEAPEIEKEVKRLLRADNEAISFTWEVIKEED 185
+PHG+TPP KN + EIE E+KRLLR+D EA S W+V+ +++
Sbjct: 163 YPHGITPPMKNAKKRRFRKKKEKKTMAVEEIEIELKRLLRSDLEAQSVRWKVVDDDE 219
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 35.1 bits (77), Expect = 0.085
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 275 KSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELK 334
K S L + Q+ Q V D DL + + E + ++D +L+++ + +E+ +LK
Sbjct: 467 KVSELEKKLDVENVQNEQEVKEMED---DLRGKQE-ELNILRND-SLKVHDVLMEIADLK 521
Query: 335 QRRQKIKLEISGIENLALRQRFQDNLHTLNQDIMYKEMEYQGLLTLQ 381
Q+ K++ + G++ L+Q NL N + M +GL LQ
Sbjct: 522 QKHSKLEKHVEGLKEENLKQERNYNLTQSNLEANLSSMR-EGLTILQ 567
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
W04A8.7 protein.
Length = 1792
Score = 32.3 bits (70), Expect = 0.60
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 231 GGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIE 282
GGG++D+D +D + +S L+ + G + N S+ S +SS +P E
Sbjct: 1389 GGGITDNDDDDRFSQISGTSSFLNGPPGAIRGGNRNSSVSGSKRRSSMMPEE 1440
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 32.3 bits (70), Expect = 0.60
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 231 GGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIE 282
GGG++D+D +D + +S L+ + G + N S+ S +SS +P E
Sbjct: 1389 GGGITDNDDDDRFSQISGTSSFLNGPPGAIRGGNRNSSVSGSKRRSSMMPEE 1440
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 31.5 bits (68), Expect = 1.0
Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 6/120 (5%)
Query: 220 KPESSNIVDIFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSAL 279
K +S+ +D G SD +D +D S + +S ++S E +
Sbjct: 426 KIRNSHRIDNKSAGYGSSDEDD----IDPYKSTVKAEGREQDDDSDDESTDEDYDLDKDM 481
Query: 280 PIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQK 339
+ SS+G S D + D SE D + E D I K E E K +R+K
Sbjct: 482 KKQKNDK--DSSEGSGSEPDDEYDSGSEKDASGTGESDPDEENIEPKKKESKEKKNKREK 539
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 31.5 bits (68), Expect = 1.0
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 228 DIFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHM 287
D FG + + T + DL+ R S+ DS ++GN T E K E GS
Sbjct: 437 DGFGYAMLPASCSTSTNDWDLEEVRKSIADSFVTGNWTEDDAEEDQLKK-----EIGSDN 491
Query: 288 FQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVD-ELKQR 336
+ G + + E G E+ + Q +LE +LKQR
Sbjct: 492 EDNDDGEDMDDEEEDGDDDETGGNEKKEESEADKSRKQKRLEAKIKLKQR 541
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 297 TSDAKCDLSSEDDGEFS-NEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQR 355
+SD + D SED E + DD R Q K V+E R ++IKL I+ + +A R
Sbjct: 421 SSDEESDEESEDSEESEESSSDDDEDRGGQQKETVEE---RMERIKLRIAKRKEVAQANR 477
Query: 356 FQDNLHT 362
DNL +
Sbjct: 478 STDNLRS 484
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 315 EKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLA---LRQRFQDNLHTLNQDIMYKE 371
E+DD+ ++ NQ E+ +LK+ +K++ S N + +R+ ++N+HT Q M +E
Sbjct: 734 ERDDLRIQGNQQIQELHDLKRDIEKLRRSESESLNESDDRVRELTRENMHTKEQVFMLQE 793
Query: 372 MEYQGLLTLQNSED 385
+ L L D
Sbjct: 794 KLRELNLELSTKND 807
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 297 TSDAKCDLSSEDDGEFS-NEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQR 355
+SD + D SED E + DD R Q K V+E R ++IKL I+ + +A R
Sbjct: 421 SSDEESDEESEDSEESEESSSDDDEDRGGQQKETVEE---RMERIKLRIAKRKEVAQANR 477
Query: 356 FQDNLHT 362
DNL +
Sbjct: 478 STDNLRS 484
>Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical
protein F26C11.2 protein.
Length = 252
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 284 GSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLE 343
GS + +S STS + S +DD NE D +AL + + E +R++ +
Sbjct: 38 GSETYLASDNGKSTSSREQSTSPDDDNLLMNEDDGIALEDDN---DTGESAAKRRRTRTN 94
Query: 344 ISGIENLALRQRFQ 357
SG + L F+
Sbjct: 95 FSGWQLEELESAFE 108
>X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein.
Length = 184
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 284 GSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLE 343
GS + +S STS + S +DD NE D +AL + + E +R++ +
Sbjct: 2 GSETYLASDNGKSTSSREQSTSPDDDNLLMNEDDGIALEDDN---DTGESAAKRRRTRTN 58
Query: 344 ISGIENLALRQRFQ 357
SG + L F+
Sbjct: 59 FSGWQLEELESAFE 72
>U80836-4|AAB37891.2| 329|Caenorhabditis elegans Hypothetical
protein B0432.6 protein.
Length = 329
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 301 KCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIK--LEISGIENLALRQRFQD 358
+C+ + + + ++ L INQLK++++E+KQ+ I+ L + E L+ + +
Sbjct: 116 ECEALRDSNKQLTDHMTRGNLEINQLKVQLEEVKQKCDSIETSLGMCITEKAGLKTQLTE 175
Query: 359 NLHTLNQDIMYKEMEYQGLLT 379
+L +++ + E L T
Sbjct: 176 SLQNAERNVHTAQNEISKLNT 196
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 7 ELEYPAELESQFILKLPEHPAKILRELLKSGENLKNRL--TIQIDNDMRRGEVRLDHWL 63
ELE E Q+ +L +H K+L EL S ++L ++ +++N + + + L H L
Sbjct: 1037 ELEQDLNRERQYKSELEQHKRKLLAELEDSKDHLAEKMGKVEELNNQLMKRDEELQHQL 1095
>Z70783-11|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 29.9 bits (64), Expect = 3.2
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 211 KRELTLHATKPESSNIVD-IFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTN-QS 268
K EL + +N+VD + +D D E++ +V+L V S+ +G+S + QS
Sbjct: 108 KEELGAKQKRSARNNVVDEVEEIDTADDDEEEDDEDVELMEDVEEVSTSQHAGSSYSFQS 167
Query: 269 LGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDM-ALRINQLK 327
G S + ALP E + +Q +S + + + S E + E+ E ++ + Q+K
Sbjct: 168 AGPS-DRYDALPEE---ARYIMTQMMSGKDEGQVNHSDEMEVEYEVETEEREPPPLKQVK 223
Query: 328 LE 329
+E
Sbjct: 224 IE 225
>U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protein
1, isoform e protein.
Length = 527
Score = 29.9 bits (64), Expect = 3.2
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 307 EDDGEFSNEKD-DMALRINQLKLEVDELKQRRQKIKLEISGIENL---ALRQRFQDNLHT 362
E+ E +KD A + QLK +DEL+ + ++ + I+NL LR++ ++ +
Sbjct: 279 ENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKEKVEK 338
Query: 363 LNQDIMYK---EMEYQGLLTLQNSEDI 386
N+ + Y+ E+ ++ + N E I
Sbjct: 339 RNEGMAYRPGGELPHEDKAVMVNLETI 365
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 29.9 bits (64), Expect = 3.2
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 307 EDDGEFSNEKD-DMALRINQLKLEVDELKQRRQKIKLEISGIENL---ALRQRFQDNLHT 362
E+ E +KD A + QLK +DEL+ + ++ + I+NL LR++ ++ +
Sbjct: 313 ENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKEKVEK 372
Query: 363 LNQDIMYK---EMEYQGLLTLQNSEDI 386
N+ + Y+ E+ ++ + N E I
Sbjct: 373 RNEGMAYRPGGELPHEDKAVMVNLETI 399
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 29.9 bits (64), Expect = 3.2
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 307 EDDGEFSNEKD-DMALRINQLKLEVDELKQRRQKIKLEISGIENL---ALRQRFQDNLHT 362
E+ E +KD A + QLK +DEL+ + ++ + I+NL LR++ ++ +
Sbjct: 410 ENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKEKVEK 469
Query: 363 LNQDIMYK---EMEYQGLLTLQNSEDI 386
N+ + Y+ E+ ++ + N E I
Sbjct: 470 RNEGMAYRPGGELPHEDKAVMVNLETI 496
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 29.9 bits (64), Expect = 3.2
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 307 EDDGEFSNEKD-DMALRINQLKLEVDELKQRRQKIKLEISGIENL---ALRQRFQDNLHT 362
E+ E +KD A + QLK +DEL+ + ++ + I+NL LR++ ++ +
Sbjct: 473 ENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKEKVEK 532
Query: 363 LNQDIMYK---EMEYQGLLTLQNSEDI 386
N+ + Y+ E+ ++ + N E I
Sbjct: 533 RNEGMAYRPGGELPHEDKAVMVNLETI 559
>Z75531-7|CAA99798.2| 316|Caenorhabditis elegans Hypothetical
protein C54D10.8 protein.
Length = 316
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 307 EDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDNLHTLNQD 366
ED+ F ++ RI QL + ++ QK+K +++ EN+ L+Q + +L +++D
Sbjct: 43 EDEMTFLKKQQAANERIEQLVAQ----RESEQKVKDQMAHFENMRLKQETKRSLEKMDED 98
Query: 367 I 367
+
Sbjct: 99 L 99
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 291 SQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENL 350
S+ ++ K +S S+ + +AL+ L+LE++ ++R Q+++ E S
Sbjct: 413 SENEQIVNEFKKIISEFSAANSSSPFECIALKNQTLQLEIEASEKRYQELQKETS----- 467
Query: 351 ALRQRFQDNL 360
ALR R+Q+NL
Sbjct: 468 ALRNRYQENL 477
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 291 SQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENL 350
S+ ++ K +S S+ + +AL+ L+LE++ ++R Q+++ E S
Sbjct: 413 SENEQIVNEFKKIISEFSAANSSSPFECIALKNQTLQLEIEASEKRYQELQKETS----- 467
Query: 351 ALRQRFQDNL 360
ALR R+Q+NL
Sbjct: 468 ALRNRYQENL 477
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 291 SQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENL 350
S+ ++ K +S S+ + +AL+ L+LE++ ++R Q+++ E S
Sbjct: 411 SENEQIVNEFKKIISEFSAANSSSPFECIALKNQTLQLEIEASEKRYQELQKETS----- 465
Query: 351 ALRQRFQDNL 360
ALR R+Q+NL
Sbjct: 466 ALRNRYQENL 475
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 29.1 bits (62), Expect = 5.6
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 235 SDSDFEDETVNVDLQNSRLSVCDS---RL-SGNSTNQSLGESLTKSSALPIEFGSHMFQS 290
SD +E + +DL+N + S+ D +L S STNQ L SL + + +
Sbjct: 719 SDLASSEEQI-LDLKNQQESLIDDLKEKLHSAESTNQELQVSL-EMLKIEVSNARQKVME 776
Query: 291 SQGVSSTSDA-KCDLSSEDDGEFS------NEKDDMALRINQLKLEVDELKQRRQKI-KL 342
S+ + + +A + +LS+ + S EKD + ++ LKL++++ ++ Q + +
Sbjct: 777 SEVLKESFEALQLELSASQEVSRSVVDAAVQEKDGLLRLVDTLKLKIEDTEKSAQDLQQS 836
Query: 343 EISGIENLAL-RQRFQDNLHTL 363
+ I+ L L Q F+ N L
Sbjct: 837 SVEEIKQLQLDLQNFKQNAEVL 858
>Z68338-2|CAA92759.1| 411|Caenorhabditis elegans Hypothetical
protein T24B8.2 protein.
Length = 411
Score = 29.1 bits (62), Expect = 5.6
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 303 DLSSEDDGEFSNEKD----DMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQD 358
D SED +F+ E D D+ +N+L E+ +L+Q+ +K + + R Q+
Sbjct: 202 DNGSEDPVKFT-EADASVVDIRKAMNKLDREIQQLEQKVKKYDEQCRACLRTGDKGRAQN 260
Query: 359 NLHT---LNQDIMYKEMEYQGLLTL 380
L +DI K+++YQ LLT+
Sbjct: 261 FLRQRKRAEKDIADKDVQYQKLLTM 285
>Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical
protein K08E4.6 protein.
Length = 234
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 299 DAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIE 348
DA +L D + D++ ++N+L + +DE +R IK ++ +E
Sbjct: 119 DAHGNLDEADLSAMARTDSDLSAKMNELGVTIDEFHRRANGIKNNLNKVE 168
>L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical
protein F10E9.2 protein.
Length = 286
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 305 SSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKL 342
S E +GEFS D L + K + +LK R K+ L
Sbjct: 202 SEEGEGEFSGRGDPAPLEVGDSKTRLSDLKITRHKMLL 239
>Z73427-4|CAA97802.2| 632|Caenorhabditis elegans Hypothetical
protein F58B3.4 protein.
Length = 632
Score = 28.7 bits (61), Expect = 7.3
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 211 KRELTLHATKPESSNIVDIFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLG 270
K +++ TK E + D F D ED + D + +S ++ N+ +G
Sbjct: 90 KEKISKKTTKDEDDELDDFFD---EKDDDEDALEDADDEEDEISDEENEDEEEEENEKIG 146
Query: 271 ESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGE---FSNEKDDMALRINQLK 327
+ K L G+ V S+SD D SSED+GE F ++ + L + L
Sbjct: 147 MNGFKRLDLARGEGN--------VDSSSD---DDSSEDEGEDVEFDEKEGGIELDLANLD 195
Query: 328 LEVDELK 334
EVD+++
Sbjct: 196 REVDQVE 202
>U88172-2|AAB42262.1| 368|Caenorhabditis elegans Hypothetical
protein ZK354.6 protein.
Length = 368
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 302 CDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISG 346
CD E+ E +KDD + + ++ K E + K+ +K K I+G
Sbjct: 3 CDRKDEEKKETEEKKDDESKKKDEKKEEKSKRKEDEKKEKQNIAG 47
>U42843-5|AAA83597.2| 375|Caenorhabditis elegans Beclin (human
autophagy) homologprotein 1 protein.
Length = 375
Score = 28.7 bits (61), Expect = 7.3
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 295 SSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVD-ELKQRRQKIKLEISGI------ 347
+S D K L + D E E+ L + +L++D + K+R + E SG
Sbjct: 104 TSIPDLKAKLQNVSDEEKELEQQLKKLLAEEEQLDLDLQTKRRTAEAASEKSGELWKKYR 163
Query: 348 ENLALRQRFQDNLHTLNQDIMYKEMEYQGL 377
+NL QD LH+L + Y E++++ L
Sbjct: 164 DNLRQVFEDQDELHSLEAERQYAEVQHRKL 193
>Z81077-15|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 28.3 bits (60), Expect = 9.7
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 260 LSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDD 318
LSGN+TN + E + + P EF G SS+SD D +DD E ++ DD
Sbjct: 1665 LSGNTTNDT-NEDNEERNGQPREF--------DGESSSSDDDNDDDDDDDDEEEDDDDD 1714
>Z75952-6|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 28.3 bits (60), Expect = 9.7
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 260 LSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDD 318
LSGN+TN + E + + P EF G SS+SD D +DD E ++ DD
Sbjct: 1665 LSGNTTNDT-NEDNEERNGQPREF--------DGESSSSDDDNDDDDDDDDEEEDDDDD 1714
>Z70311-10|CAA94377.3| 602|Caenorhabditis elegans Hypothetical
protein T25B9.6 protein.
Length = 602
Score = 28.3 bits (60), Expect = 9.7
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 215 TLHATKPESSNIVDIFGGGVSDSDFEDE-TVNVDLQNSRLSVCDSRLSGNSTNQSLGESL 273
TL + E ++I + DS FE++ + +++ ++ + + TN +LG S+
Sbjct: 296 TLPLNQNERADIDHVIRNIEEDSKFENKYKCELIMRHLLATISNWDKETHGTNSNLGSSI 355
Query: 274 TKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSED 308
KS + S S+ + S+S +LS++D
Sbjct: 356 WKSIPSEMHTASQNSYVSEVIESSSFELANLSTDD 390
>Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical
protein C49F8.2 protein.
Length = 771
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 295 SSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLE 329
SST D SS DD E SN+ D + +++ L+
Sbjct: 406 SSTESESDDESSSDDSEMSNDGDSSSSELSEKNLD 440
>Z68270-6|CAE46688.1| 158|Caenorhabditis elegans Hypothetical
protein ZC410.5b protein.
Length = 158
Score = 28.3 bits (60), Expect = 9.7
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 279 LPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQ 338
L + + F QGV+S D+ + +F N KD + N+L+ V +K
Sbjct: 23 LAVSAHAGFFDDVQGVTS------DVGNFFSNQFQNAKDLFSNDQNELEKNVQRVKDLLT 76
Query: 339 KIKLEISGIENLA 351
+K ++ G+E LA
Sbjct: 77 GLKEKVKGLEPLA 89
>Z68270-5|CAA92570.1| 174|Caenorhabditis elegans Hypothetical
protein ZC410.5a protein.
Length = 174
Score = 28.3 bits (60), Expect = 9.7
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 279 LPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQ 338
L + + F QGV+S D+ + +F N KD + N+L+ V +K
Sbjct: 23 LAVSAHAGFFDDVQGVTS------DVGNFFSNQFQNAKDLFSNDQNELEKNVQRVKDLLT 76
Query: 339 KIKLEISGIENLA 351
+K ++ G+E LA
Sbjct: 77 GLKEKVKGLEPLA 89
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 308 DDGEFSNEKDDMALRINQLKLEVDELKQR--RQKIKLEISGIENLALRQRFQDNLHTLNQ 365
D + DD LR++ L+ E DELK++ ++ + + +E R + D +
Sbjct: 509 DVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL-DEMAEKEA 567
Query: 366 DIMYKEMEYQGLLTLQNSE 384
++ + E+Q ++T E
Sbjct: 568 ELRKELAEFQAIITAMEGE 586
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 308 DDGEFSNEKDDMALRINQLKLEVDELKQR--RQKIKLEISGIENLALRQRFQDNLHTLNQ 365
D + DD LR++ L+ E DELK++ ++ + + +E R + D +
Sbjct: 509 DVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL-DEMAEKEA 567
Query: 366 DIMYKEMEYQGLLTLQNSE 384
++ + E+Q ++T E
Sbjct: 568 ELRKELAEFQAIITAMEGE 586
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 308 DDGEFSNEKDDMALRINQLKLEVDELKQR--RQKIKLEISGIENLALRQRFQDNLHTLNQ 365
D + DD LR++ L+ E DELK++ ++ + + +E R + D +
Sbjct: 269 DVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL-DEMAEKEA 327
Query: 366 DIMYKEMEYQGLLTLQNSE 384
++ + E+Q ++T E
Sbjct: 328 ELRKELAEFQAIITAMEGE 346
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 308 DDGEFSNEKDDMALRINQLKLEVDELKQR--RQKIKLEISGIENLALRQRFQDNLHTLNQ 365
D + DD LR++ L+ E DELK++ ++ + + +E R + D +
Sbjct: 509 DVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL-DEMAEKEA 567
Query: 366 DIMYKEMEYQGLLTLQNSE 384
++ + E+Q ++T E
Sbjct: 568 ELRKELAEFQAIITAMEGE 586
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.131 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,605,489
Number of Sequences: 27539
Number of extensions: 336122
Number of successful extensions: 1124
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1102
Number of HSP's gapped (non-prelim): 52
length of query: 386
length of database: 12,573,161
effective HSP length: 83
effective length of query: 303
effective length of database: 10,287,424
effective search space: 3117089472
effective search space used: 3117089472
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 60 (28.3 bits)
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