Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000646-TA|BGIBMGA000646-PA|IPR006751|TAFII55 protein
conserved region
(386 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g55300.1 68414.m06317 TATA-binding protein-associated factor ... 54 2e-07
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 35 0.080
At5g22120.1 68418.m02575 expressed protein 35 0.11
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 33 0.24
At4g27180.1 68417.m03904 kinesin-like protein B (KATB) 32 0.56
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 31 1.3
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 31 1.3
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 31 1.3
At2g22800.1 68415.m02706 homeobox-leucine zipper protein 9 (HAT9... 31 1.3
At5g41140.1 68418.m05001 expressed protein 31 1.7
At5g45220.1 68418.m05550 Toll-Interleukin-Resistance (TIR) domai... 30 2.3
At2g45480.1 68415.m05656 expressed protein 30 2.3
At1g64320.1 68414.m07289 myosin heavy chain-related similar to m... 30 2.3
At1g28490.1 68414.m03503 syntaxin 61 (SYP61) / osmotic stess-sen... 30 2.3
At5g52910.1 68418.m06566 timeless family protein contains Pfam d... 30 3.0
At3g63480.2 68416.m07149 kinesin heavy chain, putative kinesin h... 30 3.0
At3g63480.1 68416.m07148 kinesin heavy chain, putative kinesin h... 30 3.0
At3g58380.1 68416.m06507 meprin and TRAF homology domain-contain... 30 3.0
At1g22275.1 68414.m02784 expressed protein 30 3.0
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea... 29 4.0
At5g28570.1 68418.m03485 hypothetical protein 29 4.0
At1g69060.1 68414.m07902 expressed protein 29 4.0
At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical t... 29 5.3
At4g14150.1 68417.m02183 phragmoplast-associated kinesin-related... 29 5.3
At3g49760.1 68416.m05440 bZIP transcription factor family protei... 29 5.3
At3g59210.1 68416.m06601 F-box family protein contains F-box dom... 29 6.9
At3g18100.1 68416.m02301 myb family transcription factor (MYB4R1... 29 6.9
At4g07523.1 68417.m01173 hypothetical protein 28 9.2
At4g01720.1 68417.m00223 WRKY family transcription factor simila... 28 9.2
At3g18490.1 68416.m02350 aspartyl protease family protein contai... 28 9.2
At3g02950.1 68416.m00290 expressed protein 28 9.2
At2g25350.1 68415.m03032 phox (PX) domain-containing protein wea... 28 9.2
At2g05900.1 68415.m00639 SET domain-containing protein / YDG/SRA... 28 9.2
At1g43230.1 68414.m04983 hypothetical protein 28 9.2
At1g43205.1 68414.m04980 hypothetical protein 28 9.2
>At1g55300.1 68414.m06317 TATA-binding protein-associated factor
TAFII55 family protein contains Pfam profile: PF04658
TAFII55 protein conserved region
Length = 203
Score = 54.0 bits (124), Expect = 2e-07
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 14 LESQFILKLPEHPAKILRELLKSGENLKNRLTIQI--DNDMRRGEVRLDHWLMHAKIIDL 71
+E QFIL++P ++ + LL + + + + + D R G + + A ++DL
Sbjct: 1 MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60
Query: 72 PTIVESLKTIDGKSFYKTADICQMMICKDGPD 103
P +VES KT D + KTADI QM++ ++ D
Sbjct: 61 PAVVESFKTYDDCALVKTADIGQMIMVREPGD 92
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 35.1 bits (77), Expect = 0.080
Identities = 23/107 (21%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 241 DETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDA 300
+ T+N LQ + + S N+ L ++L++ + L + + Q +S + +
Sbjct: 645 ERTLNSRLQEAESKAATAEERERSVNERLSQTLSRINVLEAQLSCLRAEQGQ-LSKSLEK 703
Query: 301 KCDLSSEDDGEF---SNEKDDMALRINQLKLEVDELKQRRQKIKLEI 344
+ ++E+ E+ E D + R NQL++E+ EL+++ ++ E+
Sbjct: 704 ERQRAAENRQEYLAAKEEADTLEGRANQLEVEIRELRRKHKQELQEV 750
>At5g22120.1 68418.m02575 expressed protein
Length = 383
Score = 34.7 bits (76), Expect = 0.11
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 255 VCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSN 314
+ SR SGN NQS+ S KS F + VSS++ A D SS+DD E
Sbjct: 103 LASSRSSGNVENQSVASSGLKSDPNVSSFDADGKTEDSKVSSSNSAAHD-SSDDDWEALA 161
Query: 315 EKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDNLHTLNQDIMYKEMEY 374
+ + L L V+EL + K+ +E ++ R R T D MY + ++
Sbjct: 162 DVEPSKL------LPVEELPE-ISKLSVEEPKVQGPKRRGR---GTFTYKSDAMYSDRDF 211
Query: 375 QGLLTLQNSED 385
+SED
Sbjct: 212 SESRFDDDSED 222
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 33.5 bits (73), Expect = 0.24
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 275 KSSALPIEFGSH--MFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVD- 331
KS IE G + + +SS+G +S K D+ DD ++++ I+ L++ +D
Sbjct: 441 KSEVATIEDGGNKQVVESSKGKTSRKKKKMDVDDGDDDGSGDKEESEEKEISDLEINIDS 500
Query: 332 -ELKQRRQKIKLEISGIE 348
L R+K++ + S +E
Sbjct: 501 TSLASLRKKVRFDDSVVE 518
>At4g27180.1 68417.m03904 kinesin-like protein B (KATB)
Length = 745
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 306 SEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQR-FQDNLHTLN 364
S+DD +KD++ I LK+E+ ++K R + EI ++ A +Q F+D ++ L
Sbjct: 251 SQDD--VMKQKDELVNEIVSLKVEIQQVKDDRDRHITEIETLQAEATKQNDFKDTINELE 308
Query: 365 Q--DIMYKEME 373
+ KE+E
Sbjct: 309 SKCSVQNKEIE 319
>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 31.1 bits (67), Expect = 1.3
Identities = 27/136 (19%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 240 EDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSD 299
E+E VN +S + V + + + N + Q + + + A + QS+ + S +
Sbjct: 195 EEERVNSRDSSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYE 254
Query: 300 AKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDN 359
+ S +S + ++ +N+ K DE++ R+++ ++ E+ ++ + +
Sbjct: 255 QTEAVKSR----YSQREAELTEELNRTK---DEIEGLRKELMEKVKEDESTGDLKKLESD 307
Query: 360 LHTLNQDIMYKEMEYQ 375
L + +M KEME Q
Sbjct: 308 LMEVRGSLMDKEMELQ 323
>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 31.1 bits (67), Expect = 1.3
Identities = 27/136 (19%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 240 EDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSD 299
E+E VN +S + V + + + N + Q + + + A + QS+ + S +
Sbjct: 195 EEERVNSRDSSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYE 254
Query: 300 AKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDN 359
+ S +S + ++ +N+ K DE++ R+++ ++ E+ ++ + +
Sbjct: 255 QTEAVKSR----YSQREAELTEELNRTK---DEIEGLRKELMEKVKEDESTGDLKKLESD 307
Query: 360 LHTLNQDIMYKEMEYQ 375
L + +M KEME Q
Sbjct: 308 LMEVRGSLMDKEMELQ 323
>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 396
Score = 31.1 bits (67), Expect = 1.3
Identities = 27/136 (19%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 240 EDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSD 299
E+E VN +S + V + + + N + Q + + + A + QS+ + S +
Sbjct: 197 EEERVNSRDSSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYE 256
Query: 300 AKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDN 359
+ S +S + ++ +N+ K DE++ R+++ ++ E+ ++ + +
Sbjct: 257 QTEAVKSR----YSQREAELTEELNRTK---DEIEGLRKELMEKVKEDESTGDLKKLESD 309
Query: 360 LHTLNQDIMYKEMEYQ 375
L + +M KEME Q
Sbjct: 310 LMEVRGSLMDKEMELQ 325
>At2g22800.1 68415.m02706 homeobox-leucine zipper protein 9 (HAT9) /
HD-ZIP protein 9 identical to GB:U09341
Length = 274
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 290 SSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIEN 349
S GVSS S + D GE S E+++M R+ E +E R+K++L + ++
Sbjct: 65 SHSGVSSFSSGRVVKRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRL--TKQQS 122
Query: 350 LALRQRFQDNLHTLN 364
L + F+D+ TLN
Sbjct: 123 ALLEESFKDH-STLN 136
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 312 FSNEKDDMALRINQLKLEVDELKQRRQKI--KLEISGI-ENLALRQRFQDNLHTLNQ 365
+ +K+D+ +++ QL L+ + LKQ I KLE S + E L ++ +L +N+
Sbjct: 491 YKRDKEDLEIQVEQLSLDYEILKQENHDISYKLEQSQVQEQLKMQYECSSSLVNVNE 547
>At5g45220.1 68418.m05550 Toll-Interleukin-Resistance (TIR)
domain-containing protein domain signature TIR exists,
suggestive of a disease resistance protein.
Length = 546
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 320 ALRINQLKLEVDELKQRRQKI-----KLEISGIENLALRQRFQDNLHTLNQDIMYKEMEY 374
ALR +++ + +D +QR + + ++E SGI + R+ ++ L + + KE +
Sbjct: 353 ALRRSEINVFIDNQEQRGEDLNTLFKRIEDSGIAIVVFSSRYTESKWCLEELVKIKERVH 412
Query: 375 QGLL 378
QGLL
Sbjct: 413 QGLL 416
>At2g45480.1 68415.m05656 expressed protein
Length = 429
Score = 30.3 bits (65), Expect = 2.3
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 3/134 (2%)
Query: 213 ELTLHATKPESSNIVDIFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLG-E 271
E +H + S +V+ S S D T +D N S +SG+S Q +
Sbjct: 115 ERHMHRGRKRSRKLVESSSEVASSSTKYDNTYGLDRYNESQSHLHGTISGSSNAQVVTIA 174
Query: 272 SLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVD 331
SL + + + S S S + ++ D +F NEK + ++ + + L+ D
Sbjct: 175 SLPSARSCENVIRPSLVISEFTNKSVSHGRKNMEMSYD-DFINEK-EASMCVGVVPLQGD 232
Query: 332 ELKQRRQKIKLEIS 345
E K QK E+S
Sbjct: 233 ESKPSVQKFFPEVS 246
>At1g64320.1 68414.m07289 myosin heavy chain-related similar to
myosin heavy chain (GI:4249703) [Rana catesbeiana];
similar to smooth muscle myosin heavy chain SM2
(GI:2352945) [Homo sapiens]
Length = 476
Score = 30.3 bits (65), Expect = 2.3
Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 213 ELTLHATKPESSNIVDIFGG---GVSD--SDFEDETVNVDLQNSRLSVCDSRLSGNSTNQ 267
E L E S +V+ FG G++ D + + N++ + L ++ L+GN
Sbjct: 24 ESVLKEKGDEISTLVNKFGNSELGLTSRIEDLKCQLKNLEQEIGFLRARNAGLAGNLEVT 83
Query: 268 SLGESLTKSSALPIEFG-SHMFQSSQGVSSTSDAKCDLSSEDDGEFSNE----KDDMALR 322
+ E + G H +S + S+AK + E+ E + K++
Sbjct: 84 KVEEKERVKGLMDQVNGMKHELESLRSQKDESEAKLEKKVEEVTETKMQLKSLKEETEEE 143
Query: 323 INQLKLEVDELKQRRQKIKLEISGIENLALRQR 355
N+L E+D+LK Q + IS +++L + +
Sbjct: 144 RNRLSEEIDQLKGENQMLHRRISELDSLHMEMK 176
>At1g28490.1 68414.m03503 syntaxin 61 (SYP61) / osmotic
stess-sensitive mutant 1 (OSM1) identical to SP|Q946Y7
Syntaxin 61 (AtSYP61) (Osmotic stess-sensitive mutant 1)
{Arabidopsis thaliana}; identical to cDNA syntaxin of
plants 61 (SYP61) GI:16041649
Length = 245
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 307 EDDGEFSNEKDDMALRINQLKLEVDELKQRRQKI-KLEISGIENLALRQRFQDNLHT 362
+DDG +E D L I Q E+DEL + Q+I + ++ + L ++R D L T
Sbjct: 140 DDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDT 196
>At5g52910.1 68418.m06566 timeless family protein contains Pfam
domains PF05029: Timeless protein C terminal region and
PF04821: Timeless protein
Length = 1141
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 221 PESSNIVDIFGGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSL 269
P+S+N+VD G DS +E D + ++S S + NS Q+L
Sbjct: 619 PKSNNVVDDLSSGSDDSSDGEEQTATDEVDFKVSTFISAFASNSIIQNL 667
>At3g63480.2 68416.m07149 kinesin heavy chain, putative kinesin
heavy chain, Syncephalastrum racemosum,
SWISSPROT:KINH_SYNRA
Length = 465
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 316 KDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALR 353
+D ++ I L+ VDEL+Q+ +K++ E GI+ ALR
Sbjct: 404 EDIVSKTIQSLQQAVDELQQKVKKLEAENIGIQEQALR 441
>At3g63480.1 68416.m07148 kinesin heavy chain, putative kinesin
heavy chain, Syncephalastrum racemosum,
SWISSPROT:KINH_SYNRA
Length = 469
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 316 KDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALR 353
+D ++ I L+ VDEL+Q+ +K++ E GI+ ALR
Sbjct: 408 EDIVSKTIQSLQQAVDELQQKVKKLEAENIGIQEQALR 445
>At3g58380.1 68416.m06507 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains weak hit to Pfam PF00917: MATH
domain
Length = 307
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 302 CDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALR-QRFQDNL 360
C L +E +E L ++Q +VD L+++ +++K + ++N R Q+ +++L
Sbjct: 211 CQLPAELSDTDLDEASIAVLFVSQGGFKVDWLEKKLKEVKEKKKNVDNGKARLQQIEEDL 270
Query: 361 HTLNQDIMYKEMEYQGLLTLQNSEDI 386
LNQ K ++ + +L + + D+
Sbjct: 271 QKLNQ----KRLDLKDILDKEKANDL 292
>At1g22275.1 68414.m02784 expressed protein
Length = 856
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 211 KRELTLHATKPESSN-IVDIFGGGVSDSDFEDETVNV--DLQNSRLSVCDSRLSGNSTNQ 267
+ EL L K E +V + +SD+ E++ VN D +S + V +SRL GN ++
Sbjct: 685 QEELDLQRKKEERQRALVQLQWKVMSDNPPEEQEVNSNKDYSHSSVKVKESRLGGNKRSE 744
Query: 268 SLGES 272
+ ES
Sbjct: 745 HITES 749
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 264 STNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRI 323
S+ ++L + LT++ ++ + Q ++ + K + SSE + + DM+LR+
Sbjct: 112 SSTKTLCDQLTET----LQHLASQVQDAEKDKGFFETKFNTSSEAINSLNQQMRDMSLRL 167
Query: 324 NQLKLEVDELKQRRQKIKLE 343
+ K E+ + +++KLE
Sbjct: 168 DAAKEEITSRDKELEELKLE 187
>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 434
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/114 (20%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 247 DLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSS 306
++ N +L + + L E T+ ++L S + Q +S S ++S
Sbjct: 197 EMANLKLELQKESVLRQQEQHRLAEEQTRVASLM----SEKQELEQKISVLSSRASEVSE 252
Query: 307 EDDGEFSNE-KDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQRFQDN 359
FS E K+ + +++ + + ++ L+ RQK+ +EI ++ + + F++N
Sbjct: 253 SGQKVFSVEDKEKLEKQLHDMAVALERLESSRQKLLMEIDN-QSSEIEKLFEEN 305
>At5g28570.1 68418.m03485 hypothetical protein
Length = 156
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 309 DGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEI 344
D E +N K ++ + I LK V+ELK+ K EI
Sbjct: 81 DSEINNAKSEVTIEIEVLKAMVEELKEEGMWTKREI 116
>At1g69060.1 68414.m07902 expressed protein
Length = 630
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 280 PIEFGSHMFQSSQGVSSTSDAKC--DLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRR 337
PI S Q + G + D ++ E D ++++ R QL+++ DE +++R
Sbjct: 443 PIPSTSGQVQGTNGTAPAIDVMLNREILKETDEYKRAQEEEWESRQRQLQIQADEAQKQR 502
Query: 338 QKIKLEISGIENLALRQRFQDNLHTLNQ 365
++ KLE + L + +R ++ + + +
Sbjct: 503 KRRKLE--NMRKLEMERRQKERVEEVRE 528
>At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical to
GI:7677266
Length = 384
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 19 ILKLPEHPAKILRELLKSGENLKNRLTIQIDND 51
++ P HPA + E +K +NLK LT I +D
Sbjct: 99 LISTPFHPAYVTAERIKKAKNLKLLLTAGIGSD 131
>At4g14150.1 68417.m02183 phragmoplast-associated kinesin-related
protein (PAKRP1)
Length = 1292
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 243 TVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQSSQGVSSTSDAK 301
+V+ ++NSR S+ S LS S S GE+L +A P S + ST +K
Sbjct: 677 SVSPTIRNSRKSLKTSELSTASQKDSEGENLVTEAADPSPATSKKMNNCSSALSTQKSK 735
>At3g49760.1 68416.m05440 bZIP transcription factor family protein
similar to bZIP transcription factor GI:1769891 from
[Arabidopsis thaliana]
Length = 156
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 301 KCDLSSEDDGEFSNEK-----DDMALRINQLKLEVDELKQRRQKI--KLEISGIEN--LA 351
K LS+ + + S EK ++M++++NQLK++ ELK + + + + + +EN L
Sbjct: 75 KRKLSNRESAKRSREKKQKHLEEMSIQLNQLKIQNQELKNQLRYVLYHCQRTKMENDRLL 134
Query: 352 LRQR-FQDNLHTLNQDIMYKE 371
+ R D L + Q +M+++
Sbjct: 135 MEHRILHDKLLNIRQVLMFRQ 155
>At3g59210.1 68416.m06601 F-box family protein contains F-box domain
Pfam:PF00646
Length = 484
Score = 28.7 bits (61), Expect = 6.9
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 289 QSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIE 348
++S S+S KC L GE +N+ DDM + + Q+K ++++ Q I S I+
Sbjct: 379 ENSHSCLSSSPVKC-LKILKFGE-TNDDDDMEIEMEQIKNFLEKMPNLEQLIIYYESSID 436
Query: 349 NLALR 353
N +R
Sbjct: 437 NDLVR 441
>At3g18100.1 68416.m02301 myb family transcription factor (MYB4R1)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain
Length = 847
Score = 28.7 bits (61), Expect = 6.9
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 231 GGGVSDSDFEDETVNVDLQNSRLSVCDSRLSGNSTNQSLGESLTKSSALPIEFGSHMFQS 290
GGG SD E+E L+ + + S+ +G S+ +G SL S +F M +S
Sbjct: 55 GGGEIPSDSENEDDFEMLRTIKSQLASSKDAGRSSGPPMGLSLLSDSESEDDF--EMIRS 112
Query: 291 SQGVSSTSDAKCDLSSEDDGEFSNEKDD 318
+ S D+S G +E+DD
Sbjct: 113 ---IKSQLSLSMDVSLPPIGLSDDEEDD 137
>At4g07523.1 68417.m01173 hypothetical protein
Length = 137
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 317 DDMALRINQLKLEVDELKQRRQKIKLEIS 345
D L+INQ++ E+++LK R K EI+
Sbjct: 100 DSNRLQINQIRAEIEDLKDRLDKKDAEIA 128
>At4g01720.1 68417.m00223 WRKY family transcription factor similar
to wild oat DNA-binding protein ABF2, GenBank accession
number Z48431
Length = 489
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 280 PIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSNEKDDMA-LRINQLKLEVDELKQRRQ 338
P + G + G S +D L + G SN+ DD +I++LKLE++ L +
Sbjct: 56 PFDLGHVRTTTIVGSSGFNDG-LGLVNSCHGTSSNDGDDKTKTQISRLKLELERLHEENH 114
Query: 339 KIK 341
K+K
Sbjct: 115 KLK 117
>At3g18490.1 68416.m02350 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 500
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/73 (20%), Positives = 35/73 (47%)
Query: 295 SSTSDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLEISGIENLALRQ 354
+S+S +L S D S KD +L +++L+ + + KI+ + G++ L+
Sbjct: 75 NSSSPLSLELHSRDTFVASQHKDYKSLTLSRLERDSSRVAGIVAKIRFAVEGVDRSDLKP 134
Query: 355 RFQDNLHTLNQDI 367
+ ++ +D+
Sbjct: 135 VYNEDTRYQTEDL 147
>At3g02950.1 68416.m00290 expressed protein
Length = 236
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/46 (26%), Positives = 27/46 (58%)
Query: 298 SDAKCDLSSEDDGEFSNEKDDMALRINQLKLEVDELKQRRQKIKLE 343
S A + + + F+ KD+ +I Q K E+++LK++ ++ K++
Sbjct: 94 SQAVVEANLREKESFNEVKDETERQIMQAKAEIEDLKKQLEESKID 139
>At2g25350.1 68415.m03032 phox (PX) domain-containing protein weak
similarity to SP|Q9UTK5 Abnormal long morphology protein
1 (Sp8) {Schizosaccharomyces pombe}; contains Pfam
profile PF00787: PX domain
Length = 643
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 257 DSRLSGNSTNQS--LGESLTKSSALPIEFGSHMFQSSQGVSSTSDAKCDLSSEDDGEFSN 314
DS GNST+ S + + SS L ++GS + + S S + D+S D G+ +
Sbjct: 176 DSNDDGNSTSLSSLVHPNSGGSSLLSSDYGSDTAYETSELGSASLGQDDVSETDTGDLTL 235
Query: 315 EKD 317
++D
Sbjct: 236 DED 238
>At2g05900.1 68415.m00639 SET domain-containing protein / YDG/SRA
domain-containing protein contains Pfam profiles
PF00856: SET domain, PF05033: Pre-SET motif, PF02182:
YDG/SRA domain
Length = 312
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 26 PAKILRELLKSGENLKNRLTIQIDNDMRRGEVRLDHWLMHAKIIDLPTIVE 76
P IL +L ENLK L ++D + R L+H I ++P++V+
Sbjct: 157 PGLILEDLSNGAENLKVCLVNEVDKENGPALFRYVTSLIHEVINNIPSMVD 207
>At1g43230.1 68414.m04983 hypothetical protein
Length = 109
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 317 DDMALRINQLKLEVDELKQRRQKIKLEIS 345
D L+INQ++ E+++LK R K EI+
Sbjct: 72 DSNRLQINQIRAEIEDLKDRLDKKDAEIT 100
>At1g43205.1 68414.m04980 hypothetical protein
Length = 137
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 317 DDMALRINQLKLEVDELKQRRQKIKLEIS 345
D L+INQ++ E+++LK R K EI+
Sbjct: 100 DSNRLQINQIRAEIEDLKDRLDKKDAEIT 128
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.131 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,254,310
Number of Sequences: 28952
Number of extensions: 320783
Number of successful extensions: 926
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 909
Number of HSP's gapped (non-prelim): 37
length of query: 386
length of database: 12,070,560
effective HSP length: 82
effective length of query: 304
effective length of database: 9,696,496
effective search space: 2947734784
effective search space used: 2947734784
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 60 (28.3 bits)
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