Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000645-TA|BGIBMGA000645-PA|IPR001828|Extracellular
ligand-binding receptor, IPR001320|Ionotropic glutamate receptor,
IPR001508|NMDA receptor
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0026 + 190568-190829,192475-194534,194620-195168 66 1e-10
04_04_0940 - 29539138-29539626,29540125-29540531,29540631-295406... 58 3e-08
06_01_0618 - 4492057-4492590,4492780-4493192,4493714-4494026,449... 56 8e-08
07_03_0636 + 20168180-20168462,20168961-20170303,20170401-201706... 53 9e-07
06_03_1142 + 27961999-27962263,27963735-27965080,27965158-279654... 46 1e-04
09_04_0214 + 15711576-15711891,15712615-15713903,15714410-157151... 45 2e-04
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 43 8e-04
06_01_0631 - 4605111-4605482,4605571-4605903,4605940-4605977,460... 43 8e-04
02_01_0125 + 920128-920392,920491-921839,921921-922084,922340-92... 41 0.003
09_04_0213 + 15706638-15707915 40 0.007
09_04_0203 - 15556064-15556561,15557537-15557581,15557852-155582... 40 0.009
06_01_0630 - 4598804-4599295,4599627-4599965,4600002-4600039,460... 40 0.009
09_04_0204 - 15565684-15566223,15567272-15567678,15568143-155684... 39 0.012
09_04_0199 - 15533619-15534107,15534956-15535362,15535559-155358... 39 0.012
06_01_0627 - 4567304-4567521,4567649-4567727,4567827-4568165,456... 39 0.016
09_04_0195 - 15509412-15509580,15510136-15510467,15510494-155109... 38 0.022
06_01_0621 - 4511583-4512116,4512307-4512719,4513236-4513482 38 0.038
02_05_1011 + 33487670-33487958,33490794-33492100,33492541-334928... 38 0.038
09_04_0196 - 15519175-15519648,15520347-15520748 37 0.066
06_01_0617 - 4483517-4483978,4484093-4484490,4484814-4484898,448... 37 0.066
06_01_0616 + 4467439-4467733,4469232-4469294,4469840-4471176,447... 34 0.47
06_01_0394 - 2835438-2835896,2836664-2836913,2837197-2837669,283... 34 0.47
04_03_0985 - 21438036-21438116,21438373-21438495,21438903-214389... 33 0.82
06_01_0629 - 4582045-4582140,4582218-4582480,4582584-4582704,458... 33 1.1
>07_01_0026 + 190568-190829,192475-194534,194620-195168
Length = 956
Score = 65.7 bits (153), Expect = 1e-10
Identities = 88/370 (23%), Positives = 147/370 (39%), Gaps = 54/370 (14%)
Query: 279 AGGPESTPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELV 338
AGGP+ G+C+D+ K L + V G G NP + +V +
Sbjct: 489 AGGPDGAS-----GYCIDVFKAAVALLAYPVPVSYVVVGD-GVKNPS----YGELVQRVA 538
Query: 339 RKEVDMAIAPLTITLERETVIDFSKPFLSFDVKTKKNSFKDPTTIFSFLHPLSKEIWLCI 398
E+D A+ ++I R V+DF++P++ + + ++ ++FL P ++E+W
Sbjct: 539 EGELDAAVGDISIVTNRTRVVDFTQPYVESGLVIVTAVRERASSAWAFLKPFTREMW--- 595
Query: 399 IXXXXXXXXXXXXXXXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLG 458
H S TD + S ++ T FW S FS
Sbjct: 596 -AVTGGFFLFVGAVVWVLEHR----SNTDFRGSPRKQLVT---------VFWFS--FSTM 639
Query: 459 SFMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLATC 518
F + + + S GR+V +W F LI+ SSYTA+L S LT+ ++S Q + L
Sbjct: 640 FFAHRENTV---STLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSTGIQGLDGLIAS 696
Query: 519 PEDTAGNLG----NSMFQEGGEGNGWLN--FIFDPAGSNSEN------DKKP-------- 558
+ +G + + QE G L I D A S D+ P
Sbjct: 697 SDPIGFQVGSFAKSYLMQELGVPESRLRELAITDYASSLQTGVVAAIVDELPYVELFLST 756
Query: 559 -CEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWFTKAECEA-N 616
C+ + A + S L ++ A+ +L +G+LQ++ KW + +C +
Sbjct: 757 NCQFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILTLSENGDLQRIHDKWLSPGQCASQG 816
Query: 617 QDVQGSELTL 626
DV L L
Sbjct: 817 TDVGADRLNL 826
Score = 32.7 bits (71), Expect = 1.1
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 127 ISAQAALMYDAVQVLVDAIVRLLRKKPDI-LRGTIRRNANVNTSRIIDCNPKGKITPYEH 185
I+A YDAV + A+ +LL ++ R A T + G + ++
Sbjct: 314 INAYVLFAYDAVWMAARAVDQLLVDGSNVSFSDDARLRAENETGSALRL---GALKVFDQ 370
Query: 186 GDKISRMIKKTELDGLTGSLRFNEEGHRRNFTLQIMELTVDGEMVKIATWYDNR 239
G+++ +K G+TG +RF ++ + + ++ L V G V+ ++ NR
Sbjct: 371 GEQLLSKMKTLNFTGVTGQVRFGDDRNLADPAYEV--LNVGGTGVRRVGYWSNR 422
>04_04_0940 -
29539138-29539626,29540125-29540531,29540631-29540662,
29540809-29541086,29541164-29542515,29542616-29542874
Length = 938
Score = 57.6 bits (133), Expect = 3e-08
Identities = 77/343 (22%), Positives = 136/343 (39%), Gaps = 53/343 (15%)
Query: 291 RGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLT 350
RG C+D+ + L R V G +NP + ++ +++ + D + +T
Sbjct: 493 RGLCIDVFVAAINLLAYPVPYRFVPFGN-NRENPS----YSELINKIITDDFDAVVGDVT 547
Query: 351 ITLERETVIDFSKPFLSFDVKTKKNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXX 410
I R V+DF++P++S + + + + ++FL P + ++W
Sbjct: 548 IITNRTKVVDFTQPYVSSGLVVLTSVKRQNSGGWAFLQPFTIKMW----------TVTGL 597
Query: 411 XXXXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGSFMQQGSDITPR 470
W L + + +D K FW FS + + T R
Sbjct: 598 FFLIIGTVVWML----EHRINDEFRGPPAKQLIT---VFW----FSFSTLFFAHREDT-R 645
Query: 471 SISGRIVGSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLATCPEDTAGNLG--- 527
S GR V +W F LI+ SSYTA+L S LT+ +++ P + L T +G
Sbjct: 646 STLGRFVIIIWLFVVLIIQSSYTASLTSILTVQQLTSPITGIDSLITSDVPIGFQVGSFA 705
Query: 528 -NSMFQEGGEGNGWLNFIFDP-------------AGSNSENDKKP-CEMLV----TVAST 568
N + QE G + L + P G + D++P E+ + A
Sbjct: 706 ENYLAQELGVAHSRLKALGSPEEYKKALDLGPSKGGVAAIVDERPYIELFLYQNPKFAVV 765
Query: 569 GVQ----DFAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKW 607
G + + A P+ S L ++ A+ L +G+LQ++ KW
Sbjct: 766 GSEFTKSGWGFAFPRDSPLSVDLSTAILELSENGDLQRIHDKW 808
>06_01_0618 -
4492057-4492590,4492780-4493192,4493714-4494026,
4495257-4495828,4498324-4498600
Length = 702
Score = 56.4 bits (130), Expect = 8e-08
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 328 GGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFDVKTKKNSFKDPTTI-FSF 386
G +D +V + + A+ +TIT +RE +++F+ P+ S V D I + F
Sbjct: 271 GSYDDLVRNVSSGKFSAAVGDVTITADRENLVEFTMPYTSSGVSLLVPEENDSKPIQWIF 330
Query: 387 LHPLSKEIWLCIIXXXXXXXXXXXXXXXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNE 446
+ PL++++WL I W + + ++ + + + +
Sbjct: 331 VKPLTRDLWLATIGFFFYTGFVV----------WMI---EQPRNPEYQGSSVRQLSTASY 377
Query: 447 FTFWNSMWFSLGSFMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTRIS 506
F F +++ FS G ++ +P S +IV +W F LI++ SYTA+L+S LT R+
Sbjct: 378 FAF-STLTFSHGQIIK-----SPLS---KIVVVIWCFVVLILVQSYTASLSSMLTAKRLR 428
Query: 507 EPSQSYNKL 515
+S ++L
Sbjct: 429 PSVKSLDQL 437
>07_03_0636 +
20168180-20168462,20168961-20170303,20170401-20170678,
20170790-20170821,20170908-20171314,20171401-20171847
Length = 929
Score = 52.8 bits (121), Expect = 9e-07
Identities = 54/197 (27%), Positives = 82/197 (41%), Gaps = 31/197 (15%)
Query: 454 WFSLGSFMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTR--------- 504
WFS + + T ++ GR V VW F LI+ SSYTA+L S LT+
Sbjct: 635 WFSFSTMFFAHRENTVSAL-GRFVLLVWLFVVLIINSSYTASLTSLLTVQELTSGIQGLD 693
Query: 505 --ISEPS---------------QSYNKLAT--CPEDTAGNLGNSMFQEGGEGNGWLNFIF 545
IS PS Q N T P ++ + ++ E G GNG ++ I
Sbjct: 694 SLISSPSSIGYQVGSFARSYLVQELNIAETRLVPLNSPSDYARAL--ELGSGNGGVDAII 751
Query: 546 DPAGSNSENDKKPCEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQKLIR 605
D K C+ + A P+ S L + ++ A+ +L +G LQ++
Sbjct: 752 DELPYVEIFLSKYCKFKTVGQVFTKSGWGFAFPRDSPLAEDLSTAILTLSENGNLQRIHD 811
Query: 606 KWFTKAECEANQDVQGS 622
+W T EC A+ + GS
Sbjct: 812 EWLTGTECSADDNEVGS 828
Score = 35.9 bits (79), Expect = 0.12
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 282 PESTPNDPYRGFCVDLAKMLSDKLE--IKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVR 339
P+ P D +GF VD+ K L + +D L DG NP ++ ++ ++
Sbjct: 490 PDKGP-DGVKGFSVDVFKAAVGLLPYPVSFDFILFGDGL---KNPS----YNDLIEKVSD 541
Query: 340 KEVDMAIAPLTITLERETVIDFSKPFLSFDVKTKKNSFKDPTTIFSFLHPLSKEIW 395
D AI + I R ++DF++P+ + + + + ++FL P + ++W
Sbjct: 542 NHFDAAIGDIAIVTNRTRLVDFTQPYTESGLIILAPAREIESNAWAFLKPFTFQMW 597
>06_03_1142 +
27961999-27962263,27963735-27965080,27965158-27965435,
27965706-27965737,27965830-27966236,27966373-27966858
Length = 937
Score = 45.6 bits (103), Expect = 1e-04
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 27/222 (12%)
Query: 285 TPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDM 344
T D G+C+++ L + + G G NP +D ++ + +D
Sbjct: 487 TGPDNVTGYCIEIFNAAIKLLPYPVPCQFIVIGD-GLKNPN----YDDIINMVAANSLDA 541
Query: 345 AIAPLTITLERETVIDFSKPFLSFDVKTKKNSFKDPTTIFSFLHPLSKEIWLCIIXXXXX 404
A+ I R + +FS+P++ + + ++ ++FL P + E+W C+
Sbjct: 542 AVGDFAIVRNRTKIAEFSQPYIESGLVIVVPVKEASSSAWAFLKPFTLEMW-CVTGVLFI 600
Query: 405 XXXXXXXXXXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGSFMQQG 464
+E + + S ++ T FW S FS F +
Sbjct: 601 FVGIVVWILEHRTNE-------EFRGSPRRQMITI---------FWFS--FSTMFFAHRQ 642
Query: 465 SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTRIS 506
+ + S GR V +W F LI+ SSYTA+L S LT+ +++
Sbjct: 643 NTV---SALGRFVLIIWLFVVLIINSSYTASLTSILTVQQLA 681
Score = 32.7 bits (71), Expect = 1.1
Identities = 12/52 (23%), Positives = 28/52 (53%)
Query: 571 QDFAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWFTKAECEANQDVQGS 622
+ + A + S L ++ A+ L G+LQ++ +WF+++ C ++ G+
Sbjct: 772 EGWGFAFQRDSPLAADMSTAILQLSESGQLQRIHDEWFSRSSCSSDDSEMGA 823
>09_04_0214 +
15711576-15711891,15712615-15713903,15714410-15715117,
15715369-15715908
Length = 950
Score = 44.8 bits (101), Expect = 2e-04
Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 290 YRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPL 349
+ G C+++ + + + L K V+ +GN + G +D ++ ++ + + D A+ +
Sbjct: 488 FTGLCIEVFEEVLNGLPYKIPHDYVE---FGNGKGESNGTYDELIYKVYQNDFDAAVGDI 544
Query: 350 TITLERETVIDFSKPFLSFDVK-TKKNSFKDPTTIFSFLHPLSKEIWL 396
TI R +DF+ P+ V+ + T ++FL PL+ ++WL
Sbjct: 545 TILANRSLYVDFTLPYTESGVRMLVPVQDQRQKTAWTFLQPLTADLWL 592
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 475 RIVGSVWWFFALIVISSYTANLASYLTLTRI 505
R++ +W F LI+ SYTA+L+S LT+ ++
Sbjct: 649 RVLLVIWLFVVLILQRSYTASLSSILTVEQL 679
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 43.2 bits (97), Expect = 8e-04
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 292 GFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTI 351
GF +D+ + +L V + G +D V ++ K+ D+AI +TI
Sbjct: 488 GFSIDIFEEAVKRLPFALPYEYVA---FDTSRDTSTGSYDDFVHQVYLKKYDVAIGDITI 544
Query: 352 TLERETVIDFSKPFLSFDVKTKKNSFKDPTTIFSFLHPLSKEIWLCII 399
R +DF+ P+ V S + FL PLS+++W+ I
Sbjct: 545 RHSRMAYVDFTVPYTESGVAMIVPSKGTVDKTWIFLQPLSRDLWVATI 592
Score = 40.3 bits (90), Expect = 0.005
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 472 ISGRIVGSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLATCPED 521
I RIV VW FF LI+ S YTANLA+ LT+ ++ S ++L E+
Sbjct: 644 ILSRIVLIVWVFFFLILSSGYTANLATMLTVQQLKPTINSIDELRKSGEN 693
>06_01_0631 -
4605111-4605482,4605571-4605903,4605940-4605977,
4606208-4606520,4606622-4607967,4608265-4608334,
4608478-4608555
Length = 849
Score = 43.2 bits (97), Expect = 8e-04
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 330 WDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFDVK--TKKNSFKDPTTIFSFL 387
+D +V ++ K+ D A+ +TI R +DF+ P+ V S +PTT + FL
Sbjct: 488 YDLLVSQVFYKKFDAAVGDVTIIANRTRYVDFTMPYTESGVSMLVLSKSDDEPTT-WIFL 546
Query: 388 HPLSKEIWL 396
PL+K++W+
Sbjct: 547 QPLAKDLWI 555
Score = 30.3 bits (65), Expect = 5.7
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 535 GEGNGWLNFIFDPAGS-NSENDKKPCEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQS 593
G +G ++ IFD NS K E + F +PKGS L ++ A+ S
Sbjct: 685 GSKHGGVSAIFDEIPYLNSFCSKYGREFQMVGPIDRTSGFGFVLPKGSPLVPDLSEAILS 744
Query: 594 LKNDGELQKLIRKWF 608
L + E K+ + WF
Sbjct: 745 LTEEPERLKIEKTWF 759
>02_01_0125 +
920128-920392,920491-921839,921921-922084,922340-922370,
922534-922565,922730-923060,923210-923713
Length = 891
Score = 41.1 bits (92), Expect = 0.003
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 291 RGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLT 350
+G+C+D+ L + + G GN+NP +D +V + E D AI +
Sbjct: 494 KGYCIDVFTQALALLPYPVTYKFIPFGG-GNENPH----YDKLVQMVEDNEFDAAIGDIA 548
Query: 351 ITLERETVIDFSKPFLSFDVKTKKNSFKDPTTIFSFLHPLSKEI 394
IT+ R DF++PF+ + K ++FL P + ++
Sbjct: 549 ITMSRTVTTDFTQPFIESGLVILAPVKKHIVNSWAFLQPFTLQM 592
Score = 40.3 bits (90), Expect = 0.005
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 559 CEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWFTKAECEAN 616
C++ V + + + A P+ S L+ ++ A+ SL +GELQ++ KW +EC A+
Sbjct: 708 CKIAVAGSDFTSRGWGFAFPRDSPLQIDLSTAILSLSENGELQRIHDKWLKTSECSAD 765
>09_04_0213 + 15706638-15707915
Length = 425
Score = 39.9 bits (89), Expect = 0.007
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 470 RSISGRIVGSVWWFFALIVISSYTANLASYLTLTRISEPS 509
RS R+ VW+F LI+ SSYTA+L S LT+ R+ EPS
Sbjct: 103 RSNLARLAAVVWFFVVLILQSSYTASLTSMLTVPRL-EPS 141
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 573 FAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWFTKAE-CEANQDVQG 621
F A PKGS ++ A+ +L E+ + RKWF +++ C A Q G
Sbjct: 233 FGFAFPKGSPYVADLSRAILALTESEEMNLIERKWFGESDGCAAAQAAGG 282
>09_04_0203 -
15556064-15556561,15557537-15557581,15557852-15558258,
15558538-15558841,15559421-15560757,15561492-15561750
Length = 949
Score = 39.5 bits (88), Expect = 0.009
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 471 SISGRIVGSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLATCPEDTAGNLGNSM 530
SI R+V VW F L++ SSYTANL+S LT+ ++ ++L E G S
Sbjct: 639 SILSRLVVIVWVFVLLVITSSYTANLSSMLTVQQLQPTVTDIHELLKSGE-YVGYRNGSY 697
Query: 531 FQEGGEGNGW 540
+ EG G+
Sbjct: 698 LSDLLEGLGF 707
Score = 30.3 bits (65), Expect = 5.7
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
Query: 292 GFCVDLAKMLSDKLE--IKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPL 349
G+ +D+ + +L I Y+ DG+ N G ++ V ++ D AI +
Sbjct: 487 GYAIDVFEEALKRLPYAIPYEYVAFDDGQGVNS-----GSYNDFVYQVHLGVYDAAIGDI 541
Query: 350 TITLERETVIDFSKPFLSFDVK--TKKNSFKDPTTIFSFLHPLSKEIW 395
TI R + +DF+ P+ V +D T + FL PL+ +W
Sbjct: 542 TIRYNRTSYVDFTLPYTESGVAMIVPVKDDRDKNT-WVFLKPLTTGLW 588
>06_01_0630 -
4598804-4599295,4599627-4599965,4600002-4600039,
4600145-4600460,4600541-4600794,4601586-4601651,
4603422-4603617
Length = 566
Score = 39.5 bits (88), Expect = 0.009
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 328 GGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFDVK---TKKNSFKDPTTIF 384
G +D +V + D A+ +TIT ER DF+ P+ V +N K T +
Sbjct: 160 GSYDELVQRVSSGNYDAAVGDVTITAERTIHADFTMPYTESGVSMLVLMENDSKS-TIEW 218
Query: 385 SFLHPLSKEIWLCII 399
FL PL++E+W+ +
Sbjct: 219 VFLKPLTRELWVATV 233
>09_04_0204 -
15565684-15566223,15567272-15567678,15568143-15568446,
15568735-15570065,15570769-15570846,15570943-15571027
Length = 914
Score = 39.1 bits (87), Expect = 0.012
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 471 SISGRIVGSVWWFFALIVISSYTANLASYLTLTRI 505
SI R+V VW F L++ SSYTANL+S LT+ ++
Sbjct: 605 SILSRLVVIVWVFVLLVITSSYTANLSSMLTVQQL 639
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 328 GGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFDVK--TKKNSFKDPTTIFS 385
G ++ V ++ D AI +TI R + +DF+ P+ V +D T +
Sbjct: 486 GSYNDFVYQVHLGVYDTAIGDITIRYNRTSYVDFTLPYTESGVAMIVPVKDDRDKNT-WV 544
Query: 386 FLHPLSKEIW 395
FL PL+ ++W
Sbjct: 545 FLKPLTTDLW 554
>09_04_0199 -
15533619-15534107,15534956-15535362,15535559-15535862,
15537061-15538397,15539463-15539727
Length = 933
Score = 39.1 bits (87), Expect = 0.012
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 471 SISGRIVGSVWWFFALIVISSYTANLASYLTLTRI 505
SI R+V VW F L++ SSYTANL+S LT+ ++
Sbjct: 641 SILSRLVVIVWVFVLLVITSSYTANLSSMLTVQQL 675
>06_01_0627 -
4567304-4567521,4567649-4567727,4567827-4568165,
4568202-4568239,4568462-4568837
Length = 349
Score = 38.7 bits (86), Expect = 0.016
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 343 DMAIAPLTITLERETVIDFSKPFLSFDVK---TKKNSFKDPTTIFSFLHPLSKEIW 395
D A+ +TIT +R + ++F+ P+ V KN + TT + FL PL+KE+W
Sbjct: 59 DAAVGDITITADRASQVEFTMPYTESGVSMLVLAKNE-SESTTKWVFLKPLTKELW 113
>09_04_0195 -
15509412-15509580,15510136-15510467,15510494-15510900,
15511467-15511581,15512711-15514044,15514558-15514819
Length = 872
Score = 38.3 bits (85), Expect = 0.022
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 470 RSISGRIVGSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKL 515
+ + RIV VW FF L++ SSYTA+L S LT+ ++ + ++L
Sbjct: 575 KRLISRIVLVVWLFFILVLKSSYTASLTSMLTVQQLQPTAHDVHEL 620
>06_01_0621 - 4511583-4512116,4512307-4512719,4513236-4513482
Length = 397
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 470 RSISGRIVGSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKL 515
+S +IV +W F LI++ SYTA+L+S LT R+ +S ++L
Sbjct: 87 KSPLSKIVVVIWCFVVLILVQSYTASLSSMLTAKRLRPSVKSLDQL 132
>02_05_1011 +
33487670-33487958,33490794-33492100,33492541-33492853,
33493190-33494247
Length = 988
Score = 37.5 bits (83), Expect = 0.038
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Query: 280 GGPESTPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVR 339
G +T G+C+D+ + K+ + Y + V D Y D+P+ ++ +V ++
Sbjct: 479 GNVTATGRRNITGYCIDVFDEVM-KI-MPYPVSYVYD-PYP-DSPE---SYEKLVDQVSS 531
Query: 340 KEVDMAIAPLTITLERETVIDFSKPFL----SFDVKTKKNSFKDPTTIFSFLHPLSKEIW 395
++ D + +TIT R +DF+ PF S V +K + T+++ FL PL+ +W
Sbjct: 532 QKADAVVGDVTITASRMEEVDFTMPFTESGWSMVVAVQKET---STSMWIFLQPLTTSLW 588
Query: 396 L 396
L
Sbjct: 589 L 589
Score = 33.9 bits (74), Expect = 0.47
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 454 WFSLGSFMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTRI 505
+FS + + + ++S R V +W F LI+ SSYTA+L S LT+ ++
Sbjct: 626 YFSFSTLVFSHKEKLESNLS-RFVVIIWVFVVLILTSSYTASLTSMLTVQKL 676
>09_04_0196 - 15519175-15519648,15520347-15520748
Length = 291
Score = 36.7 bits (81), Expect = 0.066
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 475 RIVGSVWWFFALIVISSYTANLASYLTLTRI 505
RIV +W FF L++ SSYTA+L S LT+ ++
Sbjct: 8 RIVLIIWLFFLLVLTSSYTASLTSMLTVQQL 38
>06_01_0617 -
4483517-4483978,4484093-4484490,4484814-4484898,
4485002-4485838
Length = 593
Score = 36.7 bits (81), Expect = 0.066
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 460 FMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTRI 505
+ Q G I RS +IV +W F +I++ SYTA+L+S LT +R+
Sbjct: 304 YTQSGQII--RSPMSKIVVVIWCFAVVILVQSYTASLSSMLTTSRL 347
Score = 31.9 bits (69), Expect = 1.9
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 328 GGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPF 365
G +D +VG + + + + ++IT ERE +DF+ P+
Sbjct: 267 GSYDDLVGSVSSGKFNATVGDVSITAERERHVDFTMPY 304
>06_01_0616 +
4467439-4467733,4469232-4469294,4469840-4471176,
4472719-4473086,4473526-4473559,4473978-4474421
Length = 846
Score = 33.9 bits (74), Expect = 0.47
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 475 RIVGSVWWFFALIVISSYTANLASYLTLTRI 505
++V VW F LI+ +SYTANL S LT+ ++
Sbjct: 574 KLVVIVWVFTVLIITTSYTANLTSMLTVGQL 604
>06_01_0394 -
2835438-2835896,2836664-2836913,2837197-2837669,
2838941-2840608
Length = 949
Score = 33.9 bits (74), Expect = 0.47
Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 11/126 (8%)
Query: 274 VMRHKAGGPESTPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGM 333
V RH G + + GF +D+ K + L + + V G +D +
Sbjct: 500 VTRHHGRGGDDDDEPSFEGFSIDVFKAAVEHLPYNFHYKFV----------SFNGTYDSL 549
Query: 334 VGELVRKEVDMAIAPLTITLERETVIDFSKPFL-SFDVKTKKNSFKDPTTIFSFLHPLSK 392
+ K D+ + +I+ R ++FS+P+ S V S + FL P S
Sbjct: 550 MQHDYMKSYDILVGDTSISSGRYKFVEFSQPYTESGLVMVVPFSADTWDRSWIFLRPFSP 609
Query: 393 EIWLCI 398
+WL I
Sbjct: 610 AMWLLI 615
Score = 33.9 bits (74), Expect = 0.47
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 453 MWFSLGSFMQQGS-DITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTRI 505
+W SL + + G + RS + +VW A+++ ++YTA+L+S +T R+
Sbjct: 649 LWLSLAALLSPGEKERRLRSSLSKASMAVWLLVAVVLATNYTASLSSLMTAQRL 702
>04_03_0985 - 21438036-21438116,21438373-21438495,21438903-21438995,
21439176-21439388,21439589-21439687,21440248-21440317,
21442549-21442619,21442817-21442954,21443034-21443132,
21444061-21444144,21444268-21444324,21444594-21444683,
21444886-21445026,21445778-21445882,21445962-21446114,
21446215-21446316,21446404-21446562,21447039-21447222,
21447336-21447418,21447523-21447588,21447736-21447793,
21447903-21448003,21448269-21448355,21449063-21449185,
21449285-21449364,21449857-21450066,21450159-21450270,
21450709-21450927,21451356-21451726,21451866-21451965,
21452544-21452752,21453232-21453337,21453435-21453767
Length = 1439
Score = 33.1 bits (72), Expect = 0.82
Identities = 16/62 (25%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 94 VTEFGAINITGFRVLDFSRKVVRDFIDVWKKNSISAQAALMYDAVQVLVDAIVRLLRKKP 153
++ + + G V+ VV ID W + + +AQ A+++ ++V +DA+++ L +KP
Sbjct: 1355 ISPYSLLLFGGTMVIQHQTGVV--IIDGWLRLAAAAQTAVLFKQLRVTLDAVLKELIRKP 1412
Query: 154 DI 155
++
Sbjct: 1413 EM 1414
>06_01_0629 -
4582045-4582140,4582218-4582480,4582584-4582704,
4582833-4583171,4583208-4583245,4583355-4583670,
4583753-4584006,4586417-4586546
Length = 518
Score = 32.7 bits (71), Expect = 1.1
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 292 GFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTI 351
G+C+DL + +KL + V + +D +V + D A+ +TI
Sbjct: 90 GYCIDLFEAAVNKLPYRLIYEFVVFDR----------SYDELVQSVSSGINDAAVGDITI 139
Query: 352 TLERETVIDFSKPFLSFDVKT---KKNSFKDPTTIFSFLHPLSKEIWLCII 399
+R + ++F+ P+ V KN + + FL PL+KE+W +
Sbjct: 140 IADRASHVEFTMPYTESGVSMLVLAKNESESKIE-WVFLKPLTKELWFATV 189
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,995,227
Number of Sequences: 37544
Number of extensions: 746966
Number of successful extensions: 1601
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1537
Number of HSP's gapped (non-prelim): 61
length of query: 733
length of database: 14,793,348
effective HSP length: 87
effective length of query: 646
effective length of database: 11,527,020
effective search space: 7446454920
effective search space used: 7446454920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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