Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000645-TA|BGIBMGA000645-PA|IPR001828|Extracellular
ligand-binding receptor, IPR001320|Ionotropic glutamate receptor,
IPR001508|NMDA receptor
(733 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U34661-1|AAA92006.1| 962|Caenorhabditis elegans ionotropic glut... 241 9e-64
L16559-2|AAA27933.3| 962|Caenorhabditis elegans Glutamate recep... 241 9e-64
U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate rece... 234 2e-61
AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA iono... 234 2e-61
U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate rece... 215 1e-55
U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate recep... 207 2e-53
AF318609-1|AAK01097.1| 425|Caenorhabditis elegans ionotropic gl... 193 4e-49
Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical pr... 176 4e-44
U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate rece... 175 9e-44
AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic gl... 169 5e-42
AF318607-1|AAK01095.1| 398|Caenorhabditis elegans ionotropic gl... 161 2e-39
U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate recep... 151 1e-36
AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic gl... 151 1e-36
AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate rec... 149 5e-36
AF318610-1|AAK01098.1| 396|Caenorhabditis elegans ionotropic gl... 137 3e-32
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 96 7e-20
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 96 7e-20
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 81 4e-15
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 81 4e-15
AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic gl... 81 4e-15
AC006637-6|AAM54177.1| 328|Caenorhabditis elegans Glutamate rec... 65 2e-10
U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate recep... 61 2e-09
AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic gl... 61 2e-09
U41039-1|AAX88820.1| 297|Caenorhabditis elegans Hypothetical pr... 40 0.006
AF003386-7|AAB54258.2| 412|Caenorhabditis elegans Hypothetical ... 34 0.31
Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical pr... 34 0.41
Z66565-2|CAA91478.2| 502|Caenorhabditis elegans Hypothetical pr... 33 0.72
Z79756-4|CAB02119.1| 550|Caenorhabditis elegans Hypothetical pr... 33 0.95
Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical pr... 32 1.3
Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical pr... 32 1.3
Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical pr... 32 1.3
Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 32 1.3
AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical... 32 1.3
AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical... 32 1.3
AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical... 32 1.3
AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 32 1.3
AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical ... 32 1.3
Z72502-3|CAA96588.1| 423|Caenorhabditis elegans Hypothetical pr... 32 1.7
Z81581-13|CAH10785.1| 628|Caenorhabditis elegans Hypothetical p... 31 2.2
Z81581-11|CAB70244.3| 635|Caenorhabditis elegans Hypothetical p... 31 2.2
Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical pr... 30 6.7
Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical pr... 30 6.7
Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical pr... 30 6.7
Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical p... 30 6.7
Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical p... 30 6.7
AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein. 30 6.7
AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl t... 29 8.9
>U34661-1|AAA92006.1| 962|Caenorhabditis elegans ionotropic
glutamate receptor subunitprotein.
Length = 962
Score = 241 bits (591), Expect = 9e-64
Identities = 158/514 (30%), Positives = 253/514 (49%), Gaps = 48/514 (9%)
Query: 34 AFLGSIERLDRWSNKYVVLDSTTQLAKEALILHVRDVRLGRRNYHYFLSGLVMDDRWERE 93
A+L + +++D + + L++++R + + NYHY L+ +++E
Sbjct: 209 AYLMQFNMMRNNETNRILIDCASPKRLKKLLINIRSAQFNQANYHYVLANYDFLP-YDQE 267
Query: 94 VTEFGAINITGFRVLDFS-------RKVVRDFIDVWKKNSISAQAALMYDAVQVLVDAIV 146
+ + G INI+GF +++ +K ++ + + +S +AA+ +DA+ V
Sbjct: 268 MFQNGNINISGFNIINKDGREYWSLKKHLKTSSSLGGGDDVSVEAAVGHDAMLVTWHGFA 327
Query: 147 RLLRKKPDILRGTIRRNANVNTSRI-IDCNPKGK-------ITPYEHGDKIS---RMIKK 195
+ L+ + GT R N I C+P + +EHG I R +K
Sbjct: 328 KCLQANDSLFHGTFRHRRFFNRGFPGIYCDPLSDRSHPNRPFSSFEHGKTIGVAFRNMKI 387
Query: 196 TELDG-LTGSLRFNEEGHRRNFTLQIMELTVDGEMV----KIATWYDNRGXXXXXXXXXX 250
+G LTG++ F+ G+R+NF + I++L + + ++ W G
Sbjct: 388 GHKEGTLTGNIEFDRFGNRKNFDVSIVDLVSNTKATFNSKEVLAWRQGVGFFSNRTVAQH 447
Query: 251 XXXXGTYDRNKTYIVSTIEEPPYVMRHK-----AGGPESTPNDPYRGFCVDLAKMLSDKL 305
++ IV T P+VM + A E N+ + GFC+DL K+L+DK+
Sbjct: 448 SRKSQNDHKDNQVIVLTNLVAPFVMIKRECLEMANLTECQGNNKFEGFCIDLLKLLADKI 507
Query: 306 E-IKYDLRL-VKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSK 363
E Y+++L K G D G WDGM+GEL+ +A LTI ERE V+DFSK
Sbjct: 508 EEFNYEIKLGTKAGSKQAD-----GSWDGMIGELLSGRAHAVVASLTINQERERVVDFSK 562
Query: 364 PFLSFDVKTK-KNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXXXXXXXXPHEWRL 422
PF++ + K K ++FSF+ PLS EIW+ II P+EWR+
Sbjct: 563 PFMTTGISIMIKKPDKQEFSVFSFMQPLSTEIWMYIIFAYIGVSVVIFLVSRFSPYEWRV 622
Query: 423 ISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGSFMQQGSDITPRSISGRIVGSVWW 482
E + T N+F+ +N +WF+L +FMQQG+DI PRSISGRI S WW
Sbjct: 623 -----------EETSRGGFTISNDFSVYNCLWFTLAAFMQQGTDILPRSISGRIASSAWW 671
Query: 483 FFALIVISSYTANLASYLTLTRISEPSQSYNKLA 516
FF +I++SSYTANLA++LTL ++ P +S LA
Sbjct: 672 FFTMIIVSSYTANLAAFLTLEKMQAPIESVEDLA 705
Score = 65.3 bits (152), Expect = 1e-10
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 543 FIFDPAGSNSENDKKPCEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQK 602
F+ + + EN +KPC+ + A+ + +A P GS +D INLA+ +L+ GEL+K
Sbjct: 767 FLLEATANEYENTRKPCDTMKVGANLNSIGYGIATPFGSDWKDHINLAILALQERGELKK 826
Query: 603 LIRK-WFTKAECEANQDVQGS--ELTLGQXXXXXXXXXXXXXXXXXXXXXEFCQHGRAEA 659
L K W+ + +C+A V GS L L + EF R EA
Sbjct: 827 LENKWWYDRGQCDAGITVDGSSASLNLSKVAGIFYILMGGMVISMLAALGEFLYRSRIEA 886
Query: 660 ARAN 663
++N
Sbjct: 887 RKSN 890
>L16559-2|AAA27933.3| 962|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 1 protein.
Length = 962
Score = 241 bits (591), Expect = 9e-64
Identities = 158/514 (30%), Positives = 253/514 (49%), Gaps = 48/514 (9%)
Query: 34 AFLGSIERLDRWSNKYVVLDSTTQLAKEALILHVRDVRLGRRNYHYFLSGLVMDDRWERE 93
A+L + +++D + + L++++R + + NYHY L+ +++E
Sbjct: 209 AYLMQFNMMRNNETNRILIDCASPKRLKKLLINIRSAQFNQANYHYVLANYDFLP-YDQE 267
Query: 94 VTEFGAINITGFRVLDFS-------RKVVRDFIDVWKKNSISAQAALMYDAVQVLVDAIV 146
+ + G INI+GF +++ +K ++ + + +S +AA+ +DA+ V
Sbjct: 268 MFQNGNINISGFNIINKDGREYWSLKKHLKTSSSLGGGDDVSVEAAVGHDAMLVTWHGFA 327
Query: 147 RLLRKKPDILRGTIRRNANVNTSRI-IDCNPKGK-------ITPYEHGDKIS---RMIKK 195
+ L+ + GT R N I C+P + +EHG I R +K
Sbjct: 328 KCLQANDSLFHGTFRHRRFFNRGFPGIYCDPLSDRSHPNRPFSSFEHGKTIGVAFRNMKI 387
Query: 196 TELDG-LTGSLRFNEEGHRRNFTLQIMELTVDGEMV----KIATWYDNRGXXXXXXXXXX 250
+G LTG++ F+ G+R+NF + I++L + + ++ W G
Sbjct: 388 GHKEGTLTGNIEFDRFGNRKNFDVSIVDLVSNTKATFNSKEVLAWRQGVGFFSNRTVAQH 447
Query: 251 XXXXGTYDRNKTYIVSTIEEPPYVMRHK-----AGGPESTPNDPYRGFCVDLAKMLSDKL 305
++ IV T P+VM + A E N+ + GFC+DL K+L+DK+
Sbjct: 448 SRKSQNDHKDNQVIVLTNLVAPFVMIKRECLEMANLTECQGNNKFEGFCIDLLKLLADKI 507
Query: 306 E-IKYDLRL-VKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSK 363
E Y+++L K G D G WDGM+GEL+ +A LTI ERE V+DFSK
Sbjct: 508 EEFNYEIKLGTKAGSKQAD-----GSWDGMIGELLSGRAHAVVASLTINQERERVVDFSK 562
Query: 364 PFLSFDVKTK-KNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXXXXXXXXPHEWRL 422
PF++ + K K ++FSF+ PLS EIW+ II P+EWR+
Sbjct: 563 PFMTTGISIMIKKPDKQEFSVFSFMQPLSTEIWMYIIFAYIGVSVVIFLVSRFSPYEWRV 622
Query: 423 ISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGSFMQQGSDITPRSISGRIVGSVWW 482
E + T N+F+ +N +WF+L +FMQQG+DI PRSISGRI S WW
Sbjct: 623 -----------EETSRGGFTISNDFSVYNCLWFTLAAFMQQGTDILPRSISGRIASSAWW 671
Query: 483 FFALIVISSYTANLASYLTLTRISEPSQSYNKLA 516
FF +I++SSYTANLA++LTL ++ P +S LA
Sbjct: 672 FFTMIIVSSYTANLAAFLTLEKMQAPIESVEDLA 705
Score = 65.3 bits (152), Expect = 1e-10
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 543 FIFDPAGSNSENDKKPCEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQK 602
F+ + + EN +KPC+ + A+ + +A P GS +D INLA+ +L+ GEL+K
Sbjct: 767 FLLEATANEYENTRKPCDTMKVGANLNSIGYGIATPFGSDWKDHINLAILALQERGELKK 826
Query: 603 LIRK-WFTKAECEANQDVQGS--ELTLGQXXXXXXXXXXXXXXXXXXXXXEFCQHGRAEA 659
L K W+ + +C+A V GS L L + EF R EA
Sbjct: 827 LENKWWYDRGQCDAGITVDGSSASLNLSKVAGIFYILMGGMVISMLAALGEFLYRSRIEA 886
Query: 660 ARAN 663
++N
Sbjct: 887 RKSN 890
>U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform b protein.
Length = 977
Score = 234 bits (572), Expect = 2e-61
Identities = 168/519 (32%), Positives = 249/519 (47%), Gaps = 55/519 (10%)
Query: 38 SIERLDRWSNKYVVLDSTTQLAKEALILHVRDVRLGRRNYHYFLSGLVMDDRWEREVTEF 97
S E +D V++D A + + + L ++ YHY S +D+ + F
Sbjct: 229 SSEEIDEPIPVNVIVDLEGSYRTRAFLRALEESVLVKKEYHYVFSNFDVDET-DLSGFHF 287
Query: 98 GAINITGFRVLDFSRKVV----RDFIDVWK-----KNSISAQAALMYDAVQVLVDAI-VR 147
INIT FR+ D + K +F DV++ +SI AA +DA+ V A+ +
Sbjct: 288 SLINITIFRIFDKNNKKFLKTRAEFHDVYRGGFSNTDSIPTAAAFAHDAILVAGKALQIA 347
Query: 148 LLRKKPDILRGTIRRNANVNTSRI-IDCNPKGKITP------YEHGDKISRMIKK---TE 197
+ I + R+ N R + C P T +EHG KI+ IKK T+
Sbjct: 348 MNEHGKGIFDKSFVRHQLFNRGRKGLYCRPHEDQTESRQFETFEHGKKIAEAIKKVVLTD 407
Query: 198 LDG-LTGSLRFNE-EGHRRNFTLQIMELTVDGEMVKIA----TWYDNRGXXXXXXXXXXX 251
DG LTG ++F++ G R NF+ +I+E+ + W + G
Sbjct: 408 KDGTLTGRIQFDKVTGKRTNFSAEIVEIKPGVNSLNSIWERFQWAEGEGFLLGGERYVQE 467
Query: 252 XXXGTYDRNKTYIVS----------TIEEPPYVM--RHKAGGPESTPNDPYRGFCVDLAK 299
+ K + S T+ P+VM R G PE ND + G+C+DL
Sbjct: 468 KKKDSSQTRKGILPSKPWQLRFNVVTVLVKPFVMLKRRNPGEPELKGNDRFEGYCIDLLN 527
Query: 300 MLSDKLE-IKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTITLERETV 358
+L+ + +YD+ + KYG+ G WDGM+G L+ + D+A+APLTIT ERE
Sbjct: 528 LLAKNITGFEYDVFISDGNKYGSRQAD--GSWDGMIGYLLNETADVAVAPLTITQERERA 585
Query: 359 IDFSKPFLSFDVKTK-KNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXXXXXXXXP 417
+DFSKPF++ + K K IFSF+ PL IW+ + P
Sbjct: 586 VDFSKPFMTTGISIMIKKPEKQEFNIFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFSP 645
Query: 418 HEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGSFMQQGSDITPRSISGRIV 477
+E R+ E + T NEFT +NS+WF+L +FMQQG+DI PR++SGRI
Sbjct: 646 YEKRI------------EFKRGEFTVTNEFTLYNSLWFTLAAFMQQGTDILPRAVSGRIA 693
Query: 478 GSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLA 516
S WWFF LI++SSYTANLA++LTL R++ P +S LA
Sbjct: 694 SSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESVEDLA 732
Score = 49.6 bits (113), Expect = 8e-06
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 543 FIFDPAGSNSENDKKPCEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQK 602
F+ + +N E+ ++PC+ + + + +A G+ LR +NLA+ L GEL+K
Sbjct: 810 FLLEETTNNYESGRRPCDTMKVGQNLNTLGYGIATKIGNPLRVSLNLAILYLSEKGELKK 869
Query: 603 LIRK-WFTKAECEANQDVQGSELTL 626
L K W+ + +C+ G+ +L
Sbjct: 870 LENKWWYDRGQCDTGTSDGGTSSSL 894
>AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA
ionotropic glutamate receptorsubunit GLR-2 protein.
Length = 977
Score = 234 bits (572), Expect = 2e-61
Identities = 168/519 (32%), Positives = 249/519 (47%), Gaps = 55/519 (10%)
Query: 38 SIERLDRWSNKYVVLDSTTQLAKEALILHVRDVRLGRRNYHYFLSGLVMDDRWEREVTEF 97
S E +D V++D A + + + L ++ YHY S +D+ + F
Sbjct: 229 SSEEIDEPIPVNVIVDLEGSYRTRAFLRALEESVLVKKEYHYVFSNFDVDET-DLSGFHF 287
Query: 98 GAINITGFRVLDFSRKVV----RDFIDVWK-----KNSISAQAALMYDAVQVLVDAI-VR 147
INIT FR+ D + K +F DV++ +SI AA +DA+ V A+ +
Sbjct: 288 SLINITIFRIFDKNNKKFLKTRAEFHDVYRGGFSNTDSIPTAAAFAHDAILVAGKALQIA 347
Query: 148 LLRKKPDILRGTIRRNANVNTSRI-IDCNPKGKITP------YEHGDKISRMIKK---TE 197
+ I + R+ N R + C P T +EHG KI+ IKK T+
Sbjct: 348 MNEHGKGIFDKSFVRHQLFNRGRKGLYCRPHEDQTESRQFETFEHGKKIAEAIKKVVLTD 407
Query: 198 LDG-LTGSLRFNE-EGHRRNFTLQIMELTVDGEMVKIA----TWYDNRGXXXXXXXXXXX 251
DG LTG ++F++ G R NF+ +I+E+ + W + G
Sbjct: 408 KDGTLTGRIQFDKVTGKRTNFSAEIVEIKPGVNSLNSIWERFQWAEGEGFLLGGERYVQE 467
Query: 252 XXXGTYDRNKTYIVS----------TIEEPPYVM--RHKAGGPESTPNDPYRGFCVDLAK 299
+ K + S T+ P+VM R G PE ND + G+C+DL
Sbjct: 468 KKKDSSQTRKGILPSKPWQLRFNVVTVLVKPFVMLKRRNPGEPELKGNDRFEGYCIDLLN 527
Query: 300 MLSDKLE-IKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTITLERETV 358
+L+ + +YD+ + KYG+ G WDGM+G L+ + D+A+APLTIT ERE
Sbjct: 528 LLAKNITGFEYDVFISDGNKYGSRQAD--GSWDGMIGYLLNETADVAVAPLTITQERERA 585
Query: 359 IDFSKPFLSFDVKTK-KNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXXXXXXXXP 417
+DFSKPF++ + K K IFSF+ PL IW+ + P
Sbjct: 586 VDFSKPFMTTGISIMIKKPEKQEFNIFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFSP 645
Query: 418 HEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGSFMQQGSDITPRSISGRIV 477
+E R+ E + T NEFT +NS+WF+L +FMQQG+DI PR++SGRI
Sbjct: 646 YEKRI------------EFKRGEFTVTNEFTLYNSLWFTLAAFMQQGTDILPRAVSGRIA 693
Query: 478 GSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLA 516
S WWFF LI++SSYTANLA++LTL R++ P +S LA
Sbjct: 694 SSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESVEDLA 732
Score = 49.6 bits (113), Expect = 8e-06
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 543 FIFDPAGSNSENDKKPCEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQK 602
F+ + +N E+ ++PC+ + + + +A G+ LR +NLA+ L GEL+K
Sbjct: 810 FLLEETTNNYESGRRPCDTMKVGQNLNTLGYGIATKIGNPLRVSLNLAILYLSEKGELKK 869
Query: 603 LIRK-WFTKAECEANQDVQGSELTL 626
L K W+ + +C+ G+ +L
Sbjct: 870 LENKWWYDRGQCDTGTSDGGTSSSL 894
>U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform a protein.
Length = 908
Score = 215 bits (524), Expect = 1e-55
Identities = 149/445 (33%), Positives = 218/445 (48%), Gaps = 50/445 (11%)
Query: 108 LDFSRKVVRDFIDVWK-----KNSISAQAALMYDAVQVLVDAI-VRLLRKKPDILRGTIR 161
+D K +F DV++ +SI AA +DA+ V A+ + + I +
Sbjct: 233 IDEPIKTRAEFHDVYRGGFSNTDSIPTAAAFAHDAILVAGKALQIAMNEHGKGIFDKSFV 292
Query: 162 RNANVNTSRI-IDCNPKGKITP------YEHGDKISRMIKK---TELDG-LTGSLRFNE- 209
R+ N R + C P T +EHG KI+ IKK T+ DG LTG ++F++
Sbjct: 293 RHQLFNRGRKGLYCRPHEDQTESRQFETFEHGKKIAEAIKKVVLTDKDGTLTGRIQFDKV 352
Query: 210 EGHRRNFTLQIMELTVDGEMVKIA----TWYDNRGXXXXXXXXXXXXXXGTYDRNKTYIV 265
G R NF+ +I+E+ + W + G + K +
Sbjct: 353 TGKRTNFSAEIVEIKPGVNSLNSIWERFQWAEGEGFLLGGERYVQEKKKDSSQTRKGILP 412
Query: 266 S----------TIEEPPYVM--RHKAGGPESTPNDPYRGFCVDLAKMLSDKLE-IKYDLR 312
S T+ P+VM R G PE ND + G+C+DL +L+ + +YD+
Sbjct: 413 SKPWQLRFNVVTVLVKPFVMLKRRNPGEPELKGNDRFEGYCIDLLNLLAKNITGFEYDVF 472
Query: 313 LVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFDVKT 372
+ KYG+ G WDGM+G L+ + D+A+APLTIT ERE +DFSKPF++ +
Sbjct: 473 ISDGNKYGSRQAD--GSWDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISI 530
Query: 373 K-KNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXXXXXXXXPHEWRLISFTDSQTS 431
K K IFSF+ PL IW+ + P+E R+
Sbjct: 531 MIKKPEKQEFNIFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRI--------- 581
Query: 432 DHSEVATTKTTAVNEFTFWNSMWFSLGSFMQQGSDITPRSISGRIVGSVWWFFALIVISS 491
E + T NEFT +NS+WF+L +FMQQG+DI PR++SGRI S WWFF LI++SS
Sbjct: 582 ---EFKRGEFTVTNEFTLYNSLWFTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSS 638
Query: 492 YTANLASYLTLTRISEPSQSYNKLA 516
YTANLA++LTL R++ P +S LA
Sbjct: 639 YTANLAAFLTLERMTPPIESVEDLA 663
Score = 49.6 bits (113), Expect = 8e-06
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 543 FIFDPAGSNSENDKKPCEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQK 602
F+ + +N E+ ++PC+ + + + +A G+ LR +NLA+ L GEL+K
Sbjct: 741 FLLEETTNNYESGRRPCDTMKVGQNLNTLGYGIATKIGNPLRVSLNLAILYLSEKGELKK 800
Query: 603 LIRK-WFTKAECEANQDVQGSELTL 626
L K W+ + +C+ G+ +L
Sbjct: 801 LENKWWYDRGQCDTGTSDGGTSSSL 825
>U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 5 protein.
Length = 932
Score = 207 bits (506), Expect = 2e-53
Identities = 125/362 (34%), Positives = 179/362 (49%), Gaps = 14/362 (3%)
Query: 183 YEHGDKISRMIKKTELDGLTGSLR-FNEEGHRRNFTLQIMELTVDGEMVKIATWYDNRGX 241
Y+HG + I +L GL+G LR N + NF+++I L G + I W
Sbjct: 354 YQHGRSLIDNIVHNDLHGLSGDLRRLNGHPLKSNFSMRIQLLGYSGRLDDIGFWEPATNV 413
Query: 242 XXXXXXXXXXXXXGTY---DRNKTYI-VSTIEEPPYVMRHKAGGPESTPNDPYRGFCVDL 297
D K + V+TI E PYVM K E N + GFC+DL
Sbjct: 414 HVNMSGDSKAQLQRNVQVSDELKPHFRVTTIMERPYVMLKK-NHYELDANSKFEGFCIDL 472
Query: 298 AKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTITLERET 357
LS L Y + VKDGKYGND G WDGM+GE++R E +MA+APLT+ R
Sbjct: 473 LAELSKDLGFTYTIHAVKDGKYGNDKYGN-GSWDGMMGEILRGEAEMAVAPLTVNYRRSE 531
Query: 358 VIDFSKPFLSFDVKTKKNSFKDPTT-IFSFLHPLSKEIWLCIIXXXXXXXXXXXXXXXXX 416
+DF+KPFLS + D +FSFL+PLS +IW I
Sbjct: 532 AVDFTKPFLSLGISILYKVPDDQQPDLFSFLNPLSWQIWTAIATSIITVTLGMYFVANVT 591
Query: 417 PHEWRLISFTDSQTSDH--SEVATTKTTAV---NEFTFWNSMWFSLGSFMQQGSDITPRS 471
P+EW L + H + AT + + N ++FWN++W+ L + ++ G D PR+
Sbjct: 592 PYEWNLNFSCCTAHEPHPAAAFATNQEAPIVMSNNYSFWNTVWYVLSTMLKGGCDFGPRA 651
Query: 472 ISGRIVGSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLATCPEDTAGNL-GNSM 530
+S R++G WW F L++IS+YTANLA+ LT++R P ++ + LA + G + G S
Sbjct: 652 VSTRLLGGTWWVFYLVIISAYTANLAAVLTVSRPYIPIKNLDDLANQTTISYGTIRGGST 711
Query: 531 FQ 532
Q
Sbjct: 712 MQ 713
>AF318609-1|AAK01097.1| 425|Caenorhabditis elegans ionotropic
glutamate receptor GLR-5 protein.
Length = 425
Score = 193 bits (470), Expect = 4e-49
Identities = 105/275 (38%), Positives = 149/275 (54%), Gaps = 9/275 (3%)
Query: 265 VSTIEEPPYVMRHKAGGPESTPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNP 324
V+TI E PYVM K E N + GFC+DL LS L Y + VKDGKYGND
Sbjct: 1 VTTIMERPYVMLKK-NHYELDANSKFEGFCIDLLAELSKDLGFTYTIHAVKDGKYGNDKY 59
Query: 325 KIVGGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFDVKTKKNSFKDPTT-I 383
G WDGM+GE++R E +MA+APLT+ R +DF+KPFLS + D +
Sbjct: 60 GN-GSWDGMMGEILRGEAEMAVAPLTVNYRRSEAVDFTKPFLSLGISILYKVPDDQQPDL 118
Query: 384 FSFLHPLSKEIWLCIIXXXXXXXXXXXXXXXXXPHEWRLISFTDSQTSDH--SEVATTKT 441
FSFL+PLS +IW I P+EW L + H + AT +
Sbjct: 119 FSFLNPLSWQIWTAIATSIITVTLGMYFVANVTPYEWNLNFSCCTAHEPHPAAAFATNQE 178
Query: 442 TAV---NEFTFWNSMWFSLGSFMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLAS 498
+ N ++FWN++W+ L + ++ G D PR++S R++G WW F L++IS+YTANLA+
Sbjct: 179 APIVMSNNYSFWNTVWYVLSTMLKGGCDFGPRAVSTRLLGGTWWVFYLVIISAYTANLAA 238
Query: 499 YLTLTRISEPSQSYNKLATCPEDTAGNL-GNSMFQ 532
LT++R P ++ + LA + G + G S Q
Sbjct: 239 VLTVSRPYIPIKNLDDLANQTTISYGTIRGGSTMQ 273
>Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical
protein K10D3.1 protein.
Length = 836
Score = 176 bits (429), Expect = 4e-44
Identities = 111/348 (31%), Positives = 168/348 (48%), Gaps = 26/348 (7%)
Query: 183 YEHGDKISRMIKKTELDGLTGSLRFNEEGHRRNFTLQIMELTVDGEMVKIATWYDN-RGX 241
++ G I + + L G++G L + G R N+TL + T+ + K A W R
Sbjct: 324 WKSGSDIKKRFFENPLAGISGDLHWAPSGERSNYTLHVYRRTLSFQ--KFAEWSSRTRRI 381
Query: 242 XXXXXXXXXXXXXGTYDRNKTYIVSTIEEPPYVMRHKAGGPESTPNDPYRGFCVDLAKML 301
K +S E P+VM T N Y G+C+DL +
Sbjct: 382 ASSEAVVIANSSEKLTLEGKHLKISVYLEAPFVM--------ITSNGSYEGYCIDLLHKI 433
Query: 302 SDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTITLERETVIDF 361
++ L+ Y ++ V+D YG+ G W GMVGEL R + D+A+A LTI+ R VIDF
Sbjct: 434 ANILKFTYTIQKVRDNAYGSKESN--GKWSGMVGELQRGDADLAVASLTISYGRSEVIDF 491
Query: 362 SKPF--LSFDVKTKKNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXXXXXXXXPHE 419
+ P+ L + KK +D + F F+ PLS ++W+ P+E
Sbjct: 492 TVPYMHLGISILFKKPRIRD-SDWFKFMDPLSTQVWIMTFASYFVVSVAIWIIAKISPYE 550
Query: 420 WRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGSFMQQGSDITPRSISGRIVGS 479
F + D+ + N+F+ NS WF++ S MQQGS++ PR+ S R++
Sbjct: 551 ----QF--ERDEDNGQYKPVD----NQFSLRNSFWFTVCSLMQQGSELCPRAASTRLLTG 600
Query: 480 VWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLATCPEDTAGNLG 527
+WWFFALI+ISSYTANLA+ LT R+ P ++ + LA + G LG
Sbjct: 601 IWWFFALILISSYTANLAAVLTTRRMETPIENADDLAAQTKIKYGTLG 648
Score = 34.3 bits (75), Expect = 0.31
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 556 KKPCEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWF 608
++ CE++ + + + +PKGS R+ I+ A+ L+ EL +L KW+
Sbjct: 708 ERDCELMQIGGLIDQKGYGIGLPKGSPYRELISTAILRLQEKTELTELKEKWW 760
>U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 4 protein.
Length = 951
Score = 175 bits (426), Expect = 9e-44
Identities = 103/342 (30%), Positives = 173/342 (50%), Gaps = 25/342 (7%)
Query: 183 YEHGDKISRMIKKTEL-DGLTGSLRFNEEGHRRNFTLQIMELTVDGEMVKIATWYDNRGX 241
+ G ++ I+K +L + LTG ++F G R + + ++ + VK+ W + RG
Sbjct: 326 WSDGRIMNEGIRKLKLRNQLTGDVQFKSNGERDDIMYHGVG-RINSQFVKLGNWSEKRGW 384
Query: 242 XXXXXXXXXXXXX---GTYDRNKTYI-VSTIEEPPYVMRHKAGGPESTPNDPYRGFCVDL 297
+ D ++ V E P+V++ T + Y GFC+DL
Sbjct: 385 NFDSRYANRWEFDIDPDSEDLEGLHLRVVVYLEEPFVIK--------TGENQYEGFCIDL 436
Query: 298 AKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTITLERET 357
++ L+ Y + V+DG YG ++ G W+G++G L R E D++++ +TIT R
Sbjct: 437 LNEMTQVLKFNYTIIEVQDGTYGIEDES--GRWNGIIGALQRHEADLSLSAVTITYSRAE 494
Query: 358 VIDFSKPFLSFDVK---TKKNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXXXXXX 414
V+DF+ PF+ + + + D ++++FL PLS +W+ ++
Sbjct: 495 VVDFTLPFMHLGISILLARTSEETDKGSLWTFLEPLSLTVWISLLISYCIVSYSMHILAK 554
Query: 415 XXPHEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGSFMQQGSDITPRSISG 474
P+EW + D + D + K N+FT NS WF++GS MQQGSD+ PR+ +
Sbjct: 555 FSPYEWYNLERIDER--DFENIKNQK----NQFTVLNSFWFTMGSLMQQGSDVIPRAAAT 608
Query: 475 RIVGSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLA 516
R++ VWW F I+ISSYTA LA++LT+ R+S P +S LA
Sbjct: 609 RLIAVVWWMFTQIIISSYTAQLAAFLTVERMSTPIESTQDLA 650
Score = 31.9 bits (69), Expect = 1.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 556 KKPCEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWF 608
++ CE+ + + +A+PKGS LRD ++ + L+ L+ L KW+
Sbjct: 722 ERDCELQSIGGLLDSKGYGIALPKGSPLRDILSRTVLQLQERTILEALKNKWW 774
>AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic
glutamate receptor GLR-4 protein.
Length = 409
Score = 169 bits (412), Expect = 5e-42
Identities = 83/235 (35%), Positives = 132/235 (56%), Gaps = 11/235 (4%)
Query: 285 TPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDM 344
T + Y GFC+DL ++ L+ Y + V+DG YG ++ G W+G++G L R E D+
Sbjct: 13 TGENQYEGFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDES--GRWNGIIGALQRHEADL 70
Query: 345 AIAPLTITLERETVIDFSKPFLSFDVK---TKKNSFKDPTTIFSFLHPLSKEIWLCIIXX 401
+++ +TIT R V+DF+ PF+ + + + D ++++FL PLS +W+ ++
Sbjct: 71 SLSAVTITYSRAEVVDFTLPFMHLGISILLARTSEETDKGSLWTFLEPLSLTVWISLLIS 130
Query: 402 XXXXXXXXXXXXXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGSFM 461
P+EW + D + D + K N+FT NS WF++GS M
Sbjct: 131 YCIVSYSMHILAKFSPYEWYNLERIDER--DFENIKNQK----NQFTVLNSFWFTMGSLM 184
Query: 462 QQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLA 516
QQGSD+ PR+ + R++ VWW F I+ISSYTA LA++LT+ R+S P +S LA
Sbjct: 185 QQGSDVIPRAAATRLIAVVWWMFTQIIISSYTAQLAAFLTVERMSTPIESTQDLA 239
Score = 31.9 bits (69), Expect = 1.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 556 KKPCEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWF 608
++ CE+ + + +A+PKGS LRD ++ + L+ L+ L KW+
Sbjct: 311 ERDCELQSIGGLLDSKGYGIALPKGSPLRDILSRTVLQLQERTILEALKNKWW 363
>AF318607-1|AAK01095.1| 398|Caenorhabditis elegans ionotropic
glutamate receptor GLR-3 protein.
Length = 398
Score = 161 bits (390), Expect = 2e-39
Identities = 89/245 (36%), Positives = 133/245 (54%), Gaps = 15/245 (6%)
Query: 285 TPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDM 344
T N Y G+C+DL +++ L+ Y ++ V+D YG+ G W GMVGEL R + D+
Sbjct: 13 TSNGSYEGYCIDLLHKIANILKFTYTIQKVRDNAYGSKESN--GKWSGMVGELQRGDADL 70
Query: 345 AIAPLTITLERETVIDFSKPF--LSFDVKTKKNSFKDPTTIFSFLHPLSKEIWLCIIXXX 402
A+A LTI+ R VIDF+ P+ L + KK +D + F F+ PLS ++W+
Sbjct: 71 AVASLTISYGRSEVIDFTVPYMHLGISILFKKPRIRD-SDWFKFMDPLSTQVWIMTFASY 129
Query: 403 XXXXXXXXXXXXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGSFMQ 462
P+E F + D+ + N+F+ NS WF++ S MQ
Sbjct: 130 FVVSVAIWIIAKISPYE----QF--ERDEDNGQYKPVD----NQFSLRNSFWFTVCSLMQ 179
Query: 463 QGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLATCPEDT 522
QGS++ PR+ S R++ +WWFFALI+ISSYTANLA+ LT R+ P ++ + LA +
Sbjct: 180 QGSELCPRAASTRLLTGIWWFFALILISSYTANLAAVLTTRRMETPIENADDLAAQTKIK 239
Query: 523 AGNLG 527
G LG
Sbjct: 240 YGTLG 244
Score = 34.3 bits (75), Expect = 0.31
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 556 KKPCEMLVTVASTGVQDFAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWF 608
++ CE++ + + + +PKGS R+ I+ A+ L+ EL +L KW+
Sbjct: 304 ERDCELMQIGGLIDQKGYGIGLPKGSPYRELISTAILRLQEKTELTELKEKWW 356
>U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 7 protein.
Length = 465
Score = 151 bits (367), Expect = 1e-36
Identities = 81/253 (32%), Positives = 134/253 (52%), Gaps = 20/253 (7%)
Query: 265 VSTIEEPPYVMRHKAGGPESTPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNP 324
V T+ +PP+V R G P++ PY G+C+DL M+ ++ Y + V+DG +G +
Sbjct: 17 VVTLIQPPFVQR--TGDPDT----PYEGYCIDLINMIQVEVNFTYTIYEVEDGSFGTMDD 70
Query: 325 KIVGGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFDVKTKKNSFKDPT-TI 383
G W+G++G LV D+A+APL++ ERE +DF+ P+ T D ++
Sbjct: 71 N--GNWNGLIGALVSGSADIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSL 128
Query: 384 FSFLHPLSKEIWLCIIXXXXXXXXXXXXXXXXXPHEWRLISFTDSQTSDHSEVATTKTTA 443
F F+ L +WLCI+ P+ SFT+++ +++
Sbjct: 129 FKFMKVLEWPVWLCIVAAYLFTSILLWIFDRFSPY-----SFTNNKERYQNDIEK----- 178
Query: 444 VNEFTFWNSMWFSLGSFMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLT 503
+F+ +WF + S QG P++ISGR+V + WW F I+I+SYTANLA++LT++
Sbjct: 179 -RQFSLKECLWFCMTSLTPQGGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVS 237
Query: 504 RISEPSQSYNKLA 516
R+ +P S + LA
Sbjct: 238 RLEQPISSLDDLA 250
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 573 FAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWFT----KAECEANQD 618
+A+A+ G L+D I+ A+ L N+ L+ L KW+T K C + D
Sbjct: 372 YAIAVQSGHILKDKISSAILMLLNERRLETLKEKWWTDNPNKVSCPDSSD 421
>AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic
glutamate receptor GLR-7 protein.
Length = 436
Score = 151 bits (367), Expect = 1e-36
Identities = 81/253 (32%), Positives = 134/253 (52%), Gaps = 20/253 (7%)
Query: 265 VSTIEEPPYVMRHKAGGPESTPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNP 324
V T+ +PP+V R G P++ PY G+C+DL M+ ++ Y + V+DG +G +
Sbjct: 1 VVTLIQPPFVQR--TGDPDT----PYEGYCIDLINMIQVEVNFTYTIYEVEDGSFGTMDD 54
Query: 325 KIVGGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFDVKTKKNSFKDPT-TI 383
G W+G++G LV D+A+APL++ ERE +DF+ P+ T D ++
Sbjct: 55 N--GNWNGLIGALVSGSADIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSL 112
Query: 384 FSFLHPLSKEIWLCIIXXXXXXXXXXXXXXXXXPHEWRLISFTDSQTSDHSEVATTKTTA 443
F F+ L +WLCI+ P+ SFT+++ +++
Sbjct: 113 FKFMKVLEWPVWLCIVAAYLFTSILLWIFDRFSPY-----SFTNNKERYQNDIEK----- 162
Query: 444 VNEFTFWNSMWFSLGSFMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLT 503
+F+ +WF + S QG P++ISGR+V + WW F I+I+SYTANLA++LT++
Sbjct: 163 -RQFSLKECLWFCMTSLTPQGGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVS 221
Query: 504 RISEPSQSYNKLA 516
R+ +P S + LA
Sbjct: 222 RLEQPISSLDDLA 234
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 573 FAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWFT----KAECEANQD 618
+A+A+ G L+D I+ A+ L N+ L+ L KW+T K C + D
Sbjct: 356 YAIAVQSGHILKDKISSAILMLLNERRLETLKEKWWTDNPNKVSCPDSSD 405
>AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 6, isoform a protein.
Length = 844
Score = 149 bits (362), Expect = 5e-36
Identities = 116/421 (27%), Positives = 184/421 (43%), Gaps = 46/421 (10%)
Query: 122 WKKNSISAQAALMYDAVQVLVDAIVRLLRKKPDILRGTIRRNANVNTSRIIDCNPKGKIT 181
W +N ++ + MY + + R K + +I RII C +
Sbjct: 271 WNQNDLAIKLPDMYQEYLAKIPSNPRTPFKDFAFIFDSILLACQAGDRRIISCGDNEAVK 330
Query: 182 PYEHGDKISRMIKKTELDGLTGSLRFNEEGHRRNFTLQIMELTVDGEMVKIATWYDNRGX 241
++ I + K GLTG + FN R + L I E+ + G + W +
Sbjct: 331 KFKL--PIVKPFK-----GLTGKISFNGTSDRSDSELHIWEMGITGAGLHTGIW-KSTWE 382
Query: 242 XXXXXXXXXXXXXGTYDR-------NKTYIVSTIEEPPYVMRHKAGGPESTPNDPYRGFC 294
GT++ ++T V++I E PYV+ P+ + GFC
Sbjct: 383 GSKELTMLAKNIPGTHEHYQASVRESRTLKVTSIHEKPYVIEKIM--PDGRIK--HEGFC 438
Query: 295 VDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTITLE 354
VDL L++ L Y L++VKD KYG + WDGM+GE++R + DMA+AP+T+T
Sbjct: 439 VDLLDKLAEMLHFNYTLKIVKDNKYG-ERKNGTDEWDGMIGEILRGDADMAVAPITVTAT 497
Query: 355 RETVIDFSKPFLSFDVK--TKKNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXXXX 412
R VIDF+ PFL + ++ + K +++ FL PLS +W
Sbjct: 498 RLEVIDFTDPFLQLGISMLMRQPNPKSSSSLTRFLWPLSASVWTFSAIATVITALLVTVA 557
Query: 413 XXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGSFMQQGSDITPRSI 472
P E +TA EF NS+W+ + ++ GS ++
Sbjct: 558 AVLSPKE---------------------STA--EFKIQNSVWYLVCILLRAGSGYNCQAG 594
Query: 473 SGRIVGSVWWFFALIVISSYTANLASYLTLTRISEPSQSYNKLATCPEDTAGN-LGNSMF 531
+ R++ +VWW F L++I+ YTAN A+ LT+ R S P S+ +L E G+ LG S
Sbjct: 595 ATRLISAVWWSFTLVLIAQYTANFAALLTVDRKSMPFNSFEELGNQTEYNFGSILGGSTM 654
Query: 532 Q 532
Q
Sbjct: 655 Q 655
Score = 34.3 bits (75), Expect = 0.31
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 569 GVQDFAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWFTKA--ECEANQ 617
G +++A+PKGSK R+ + + L G + L W+ K+ EC++++
Sbjct: 724 GSNGYSIALPKGSKWREKLTRQILDLNEKGIILMLKNNWWKKSQQECQSSE 774
>AF318610-1|AAK01098.1| 396|Caenorhabditis elegans ionotropic
glutamate receptor GLR-6 protein.
Length = 396
Score = 137 bits (331), Expect = 3e-32
Identities = 88/271 (32%), Positives = 134/271 (49%), Gaps = 31/271 (11%)
Query: 265 VSTIEEPPYVMRHKAGGPESTPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNP 324
V++I E PYV+ P+ + GFCVDL L++ L Y L++VKD KYG +
Sbjct: 1 VTSIHEKPYVIEKIM--PDGRIK--HEGFCVDLLDKLAEMLHFNYTLKIVKDNKYG-ERK 55
Query: 325 KIVGGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFDVK--TKKNSFKDPTT 382
WDGM+GE++R + DMA+AP+T+T R VIDF+ PFL + ++ + K ++
Sbjct: 56 NGTDEWDGMIGEILRGDADMAVAPITVTATRLEVIDFTDPFLQLGISMLMRQPNPKSSSS 115
Query: 383 IFSFLHPLSKEIWLCIIXXXXXXXXXXXXXXXXXPHEWRLISFTDSQTSDHSEVATTKTT 442
+ FL PLS +W P E +T
Sbjct: 116 LTRFLWPLSASVWTFSAIATVITALLVTVAAVLSPKE---------------------ST 154
Query: 443 AVNEFTFWNSMWFSLGSFMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTL 502
A EF NS+W+ + ++ GS ++ + R++ +VWW F L++I+ YTAN A+ LT+
Sbjct: 155 A--EFKIQNSVWYLVCILLRAGSGYNCQAGATRLISAVWWSFTLVLIAQYTANFAALLTV 212
Query: 503 TRISEPSQSYNKLATCPEDTAGN-LGNSMFQ 532
R S P S+ +L E G+ LG S Q
Sbjct: 213 DRKSMPFNSFEELGNQTEYNFGSILGGSTMQ 243
Score = 34.3 bits (75), Expect = 0.31
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 569 GVQDFAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWFTKA--ECEANQ 617
G +++A+PKGSK R+ + + L G + L W+ K+ EC++++
Sbjct: 312 GSNGYSIALPKGSKWREKLTRQILDLNEKGIILMLKNNWWKKSQQECQSSE 362
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 96.3 bits (229), Expect = 7e-20
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 4/174 (2%)
Query: 332 GMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFDVKTKKNSFKDPTTIFSFLHPLS 391
G++GEL DMAI +TI ERE ++DF++P+L ++ + + + + SFL PL
Sbjct: 506 GVIGELDGDTADMAIGGITINPERERIVDFTEPWLYHGIRILEKNIPRDSPMQSFLQPLQ 565
Query: 392 KEIWLCIIXXXXXXXXXXXXXXXXXPHE--WRLISFTDSQTSDHSEVATTKTTAVNEFTF 449
+W + P E ++ + E+ K N F
Sbjct: 566 SSLWTALFISVILVGLAIYCLDFKSPFERFYQADKEMEQDLKKEFELWIGKDADEN-VNF 624
Query: 450 WNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTL 502
+MWF G + G S+ TPRS S R++G VW F +I+++SYTANLA++L L
Sbjct: 625 GEAMWFVWGVLLNSGVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAFLVL 678
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 96.3 bits (229), Expect = 7e-20
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 4/174 (2%)
Query: 332 GMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFDVKTKKNSFKDPTTIFSFLHPLS 391
G++GEL DMAI +TI ERE ++DF++P+L ++ + + + + SFL PL
Sbjct: 506 GVIGELDGDTADMAIGGITINPERERIVDFTEPWLYHGIRILEKNIPRDSPMQSFLQPLQ 565
Query: 392 KEIWLCIIXXXXXXXXXXXXXXXXXPHE--WRLISFTDSQTSDHSEVATTKTTAVNEFTF 449
+W + P E ++ + E+ K N F
Sbjct: 566 SSLWTALFISVILVGLAIYCLDFKSPFERFYQADKEMEQDLKKEFELWIGKDADEN-VNF 624
Query: 450 WNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTL 502
+MWF G + G S+ TPRS S R++G VW F +I+++SYTANLA++L L
Sbjct: 625 GEAMWFVWGVLLNSGVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAFLVL 678
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 80.6 bits (190), Expect = 4e-15
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 292 GFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTI 351
G+CVDL L++ + Y L V+D K+G K GW+G++ +L+ + DM + L +
Sbjct: 348 GYCVDLLNKLANDIGFTYTLYKVRDEKWGL---KTENGWNGLIADLMHNKADMCVTSLKL 404
Query: 352 TLERETVIDFSKPFLSFDVKTKKNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXXX 411
ER IDFS PFL + + +FL P W+ I+
Sbjct: 405 NSERARDIDFSLPFLDTGISIIVKIRSGVLSPTAFLEPFEYSTWVIILFVCI-------- 456
Query: 412 XXXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGS-FMQQGSDITPR 470
H + F S +S ++F+ + S W + F S P+
Sbjct: 457 ------HVAAISIFLFEWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFSASVSTDVPK 510
Query: 471 SISGRIVGSVWWFFALIVISSYTANLASYLTLTRI 505
S R++ VW F L ++ YTANLA+++ +TR+
Sbjct: 511 STVSRLMALVWAAFGLTFLAVYTANLAAFM-ITRV 544
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 80.6 bits (190), Expect = 4e-15
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 292 GFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTI 351
G+CVDL L++ + Y L V+D K+G K GW+G++ +L+ + DM + L +
Sbjct: 348 GYCVDLLNKLANDIGFTYTLYKVRDEKWGL---KTENGWNGLIADLMHNKADMCVTSLKL 404
Query: 352 TLERETVIDFSKPFLSFDVKTKKNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXXX 411
ER IDFS PFL + + +FL P W+ I+
Sbjct: 405 NSERARDIDFSLPFLDTGISIIVKIRSGVLSPTAFLEPFEYSTWVIILFVCI-------- 456
Query: 412 XXXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGS-FMQQGSDITPR 470
H + F S +S ++F+ + S W + F S P+
Sbjct: 457 ------HVAAISIFLFEWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFSASVSTDVPK 510
Query: 471 SISGRIVGSVWWFFALIVISSYTANLASYLTLTRI 505
S R++ VW F L ++ YTANLA+++ +TR+
Sbjct: 511 STVSRLMALVWAAFGLTFLAVYTANLAAFM-ITRV 544
>AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic
glutamate receptor NMR-2 protein.
Length = 433
Score = 80.6 bits (190), Expect = 4e-15
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 292 GFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTI 351
G+CVDL L++ + Y L V+D K+G K GW+G++ +L+ + DM + L +
Sbjct: 55 GYCVDLLNKLANDIGFTYTLYKVRDEKWGL---KTENGWNGLIADLMHNKADMCVTSLKL 111
Query: 352 TLERETVIDFSKPFLSFDVKTKKNSFKDPTTIFSFLHPLSKEIWLCIIXXXXXXXXXXXX 411
ER IDFS PFL + + +FL P W+ I+
Sbjct: 112 NSERARDIDFSLPFLDTGISIIVKIRSGVLSPTAFLEPFEYSTWVIILFVCI-------- 163
Query: 412 XXXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNEFTFWNSMWFSLGS-FMQQGSDITPR 470
H + F S +S ++F+ + S W + F S P+
Sbjct: 164 ------HVAAISIFLFEWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFSASVSTDVPK 217
Query: 471 SISGRIVGSVWWFFALIVISSYTANLASYLTLTRI 505
S R++ VW F L ++ YTANLA+++ +TR+
Sbjct: 218 STVSRLMALVWAAFGLTFLAVYTANLAAFM-ITRV 251
>AC006637-6|AAM54177.1| 328|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 6, isoform b protein.
Length = 328
Score = 64.9 bits (151), Expect = 2e-10
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 446 EFTFWNSMWFSLGSFMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTRI 505
EF NS+W+ + ++ GS ++ + R++ +VWW F L++I+ YTAN A+ LT+ R
Sbjct: 52 EFKIQNSVWYLVCILLRAGSGYNCQAGATRLISAVWWSFTLVLIAQYTANFAALLTVDRK 111
Query: 506 SEPSQSYNKLATCPEDTAGN-LGNSMFQ 532
S P S+ +L E G+ LG S Q
Sbjct: 112 SMPFNSFEELGNQTEYNFGSILGGSTMQ 139
Score = 34.3 bits (75), Expect = 0.31
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 569 GVQDFAVAMPKGSKLRDGINLALQSLKNDGELQKLIRKWFTKA--ECEANQ 617
G +++A+PKGSK R+ + + L G + L W+ K+ EC++++
Sbjct: 208 GSNGYSIALPKGSKWREKLTRQILDLNEKGIILMLKNNWWKKSQQECQSSE 258
>U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 8 protein.
Length = 489
Score = 61.3 bits (142), Expect = 2e-09
Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 29/249 (11%)
Query: 270 EPPYVMRHKAGGPESTPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGG 329
EPPYV T G +++ K + +L + Y++ +G + G
Sbjct: 14 EPPYVNYVNFSDAAVTDKGYGPGVVMEILKEIGKRLNLTYEILPALGSTWGE---YLNGS 70
Query: 330 WDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFD---VKTKKNSFKDPTTIFSF 386
W G G+LVR EVD+ + +R + D + PF F+ + + + T+
Sbjct: 71 WTGAFGQLVRGEVDLLAGGAIMEYDRSVIADLTYPF-QFEPTGIMIRSPEKYEDDTLLIV 129
Query: 387 LHPLSKEIWLCIIXXXXXXXXXXXXXXXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNE 446
P S E+W+ + T+ + E+ T ++
Sbjct: 130 TEPFSWEVWVITAAVILISGVI-------------FLVMTNIIRKVYEEMTVTPFESI-- 174
Query: 447 FTFWNSMWFSLGSFMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTRIS 506
W ++FS+ F+QQG PRS S R++ ++WW ++ + +++T +L + + + +
Sbjct: 175 ---W--VFFSI--FVQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTN 227
Query: 507 EPSQSYNKL 515
P Q+ ++L
Sbjct: 228 VPFQNIDQL 236
>AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic
glutamate receptor GLR-8 protein.
Length = 406
Score = 61.3 bits (142), Expect = 2e-09
Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 29/249 (11%)
Query: 270 EPPYVMRHKAGGPESTPNDPYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIVGG 329
EPPYV T G +++ K + +L + Y++ +G + G
Sbjct: 6 EPPYVNYVNFSDAAVTDKGYGPGVVMEILKEIGKRLNLTYEILPALGSTWGE---YLNGS 62
Query: 330 WDGMVGELVRKEVDMAIAPLTITLERETVIDFSKPFLSFD---VKTKKNSFKDPTTIFSF 386
W G G+LVR EVD+ + +R + D + PF F+ + + + T+
Sbjct: 63 WTGAFGQLVRGEVDLLAGGAIMEYDRSVIADLTYPF-QFEPTGIMIRSPEKYEDDTLLIV 121
Query: 387 LHPLSKEIWLCIIXXXXXXXXXXXXXXXXXPHEWRLISFTDSQTSDHSEVATTKTTAVNE 446
P S E+W+ + T+ + E+ T ++
Sbjct: 122 TEPFSWEVWVITAAVILISGVI-------------FLVMTNIIRKVYEEMTVTPFESI-- 166
Query: 447 FTFWNSMWFSLGSFMQQGSDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTRIS 506
W ++FS+ F+QQG PRS S R++ ++WW ++ + +++T +L + + + +
Sbjct: 167 ---W--VFFSI--FVQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTN 219
Query: 507 EPSQSYNKL 515
P Q+ ++L
Sbjct: 220 VPFQNIDQL 228
>U41039-1|AAX88820.1| 297|Caenorhabditis elegans Hypothetical
protein ZK867.2 protein.
Length = 297
Score = 39.9 bits (89), Expect = 0.006
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 286 PNDPYRGFCVDLAKMLSDKLEIKYDLRLV--KDGK-YGNDNPKIVGGWDGMVGELVRKEV 342
PN + G V++ KM+ + + Y + V K G+ Y + + G W GM+G L ++
Sbjct: 22 PNCKHPGAEVEILKMIFRLIGVNYTMIDVWKKFGQQYDFGSKQKNGNWSGMIGLLQSDQL 81
Query: 343 DMAIAPLTITLERETVIDFSKPFLSFD 369
DM + I ERE V+ FS P F+
Sbjct: 82 DMIGLSMRIAPEREEVVLFSYPTRVFE 108
>AF003386-7|AAB54258.2| 412|Caenorhabditis elegans Hypothetical
protein F59E12.8 protein.
Length = 412
Score = 34.3 bits (75), Expect = 0.31
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 333 MVGELVRKEVDMAIAPLTITLERETVIDFSKP--FLSFDVKTKKNSFKDPTTIFSFLHPL 390
M+G++ + +DMA +T +R V+ F+ P F V + K +F F HP
Sbjct: 1 MLGDIQKGRIDMACGRFRMTADRANVLTFTYPTQFEVNQVYLITDPQKSVDVVFLF-HPF 59
Query: 391 SKEIWLCI 398
S +WL +
Sbjct: 60 STTVWLLL 67
>Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical
protein W02A2.5 protein.
Length = 487
Score = 33.9 bits (74), Expect = 0.41
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Query: 289 PYRGFCVDLAKMLSDKLEIKYDLRLVKDGKYGNDNPKIV--GGWDGMVGELVRKEVDMAI 346
P+ G+ +++ KM++D L+ + + G D + G W G++G L D
Sbjct: 35 PFPGWTMEVLKMITDSLKWEIIPVVTPTIVGGLDWGTLQKNGTWSGVLGYLQNGTADAVA 94
Query: 347 APLTITLERETVIDFSKPFLSFD--VKTKKNSFKDPTTIFSFLHPLSKEIWLCII 399
T R ++S P + +K + + +++ P S E+WLC++
Sbjct: 95 LMYQKTDTRNEYFEYSYPVTNVQPVFVARKKTETLGSVLWNAFKPFSVEVWLCLL 149
>Z66565-2|CAA91478.2| 502|Caenorhabditis elegans Hypothetical
protein T04F8.2 protein.
Length = 502
Score = 33.1 bits (72), Expect = 0.72
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 482 WFFALIVISSYTANLASYLTLTRISEPSQSYNKLATCPEDTAGNLGNSMFQEGGEGNGWL 541
W F+LI+ + +N + L P SY K + LG + E N +
Sbjct: 420 WRFSLILALTTFSNFVALSCLVHQFWPKSSYRKFFADYTNGHRRLGRD---DSHEFNDYD 476
Query: 542 NFIFDPAGSNSENDKKPCEMLV 563
NF+F S+SE D CE ++
Sbjct: 477 NFLFYAEDSDSETDYPECEDVI 498
>Z79756-4|CAB02119.1| 550|Caenorhabditis elegans Hypothetical
protein F53C11.6 protein.
Length = 550
Score = 32.7 bits (71), Expect = 0.95
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 418 HEWRLISFTDSQTSDHSE---VATTKTTAVNEFTFWN---SMWFSLGSFMQQGSDITPRS 471
H W+ +F + ++ + A T T++ F +N S +S+ F G D P S
Sbjct: 85 HRWQEAAFNANPLTNFTSNLFFAATTLTSIESFVIYNLGKSSTYSILIFSGYGID-APES 143
Query: 472 ISGRIVGSVWWFFALIVISSYTANLASYLT 501
+ GR+ V+ FF + + A++A + T
Sbjct: 144 LIGRVFCLVYLFFGIPLYLITIADMAKFCT 173
>Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 446 EFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTR 504
E + NSMWF + +FM G DI P + GR + V S+ A ++ L L+R
Sbjct: 310 EHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTGIVGAGVSSALIAIISRKLELSR 369
>Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 446 EFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTR 504
E + NSMWF + +FM G DI P + GR + V S+ A ++ L L+R
Sbjct: 379 EHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTGIVGAGVSSALIAIISRKLELSR 438
>Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 446 EFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTR 504
E + NSMWF + +FM G DI P + GR + V S+ A ++ L L+R
Sbjct: 444 EHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTGIVGAGVSSALIAIISRKLELSR 503
>Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 446 EFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTR 504
E + NSMWF + +FM G DI P + GR + V S+ A ++ L L+R
Sbjct: 491 EHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTGIVGAGVSSALIAIISRKLELSR 550
>AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 446 EFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTR 504
E + NSMWF + +FM G DI P + GR + V S+ A ++ L L+R
Sbjct: 310 EHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTGIVGAGVSSALIAIISRKLELSR 369
>AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 446 EFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTR 504
E + NSMWF + +FM G DI P + GR + V S+ A ++ L L+R
Sbjct: 379 EHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTGIVGAGVSSALIAIISRKLELSR 438
>AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 446 EFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTR 504
E + NSMWF + +FM G DI P + GR + V S+ A ++ L L+R
Sbjct: 444 EHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTGIVGAGVSSALIAIISRKLELSR 503
>AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 446 EFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTR 504
E + NSMWF + +FM G DI P + GR + V S+ A ++ L L+R
Sbjct: 491 EHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTGIVGAGVSSALIAIISRKLELSR 550
>AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical
protein B0399.1c protein.
Length = 555
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 446 EFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLTR 504
E + NSMWF + +FM G DI P + GR + V S+ A ++ L L+R
Sbjct: 254 EHYYLNSMWFIMVTFMSIGYGDIVPNTYCGRCLSITTGIVGAGVSSALIAIISRKLELSR 313
>Z72502-3|CAA96588.1| 423|Caenorhabditis elegans Hypothetical
protein C08B6.5 protein.
Length = 423
Score = 31.9 bits (69), Expect = 1.7
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 305 LEIKYDLRLVKDGKYGNDNPKIVGGWDGMVGELVRKEVDMAIAPLTITLERETVIDFSKP 364
++ + + +V D +GN P G + G++G L + ++DM+ + IT R F+ P
Sbjct: 30 IDTEKEFNVVND--FGNPQPD--GNFSGIMGLLAQDKIDMSGLSMRITPARMEFAHFTFP 85
Query: 365 FLSF-DVKTKKNSFKDPTTIFSFLHPLSKEIWLCII 399
F V K ++ F F P + ++WL ++
Sbjct: 86 IRYFQQVYIIKRPAENDFRNFVFA-PFTTDMWLLLL 120
>Z81581-13|CAH10785.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 445 NEFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLT 503
N+ + NS+W +F+ G DI P++ GR + V S A +A L LT
Sbjct: 423 NDINYVNSIWLVAITFLSVGYGDIVPKTNCGRSMAIVTGILGTCASSMVVAVIARKLELT 482
Query: 504 R 504
R
Sbjct: 483 R 483
>Z81581-11|CAB70244.3| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 445 NEFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLT 503
N+ + NS+W +F+ G DI P++ GR + V S A +A L LT
Sbjct: 430 NDINYVNSIWLVAITFLSVGYGDIVPKTNCGRSMAIVTGILGTCASSMVVAVIARKLELT 489
Query: 504 R 504
R
Sbjct: 490 R 490
>Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical
protein F08A10.1c protein.
Length = 672
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 445 NEFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLT 503
N+ + NS+W +F+ G DI P++ GR + V S A +A L LT
Sbjct: 450 NDINYVNSIWLVAITFLSVGYGDIVPKTNCGRSMAIVTGILGTCASSMVVAVIARKLELT 509
Query: 504 R 504
R
Sbjct: 510 R 510
>Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical
protein F08A10.1b protein.
Length = 655
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 445 NEFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLT 503
N+ + NS+W +F+ G DI P++ GR + V S A +A L LT
Sbjct: 450 NDINYVNSIWLVAITFLSVGYGDIVPKTNCGRSMAIVTGILGTCASSMVVAVIARKLELT 509
Query: 504 R 504
R
Sbjct: 510 R 510
>Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 445 NEFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLT 503
N+ + NS+W +F+ G DI P++ GR + V S A +A L LT
Sbjct: 423 NDINYVNSIWLVAITFLSVGYGDIVPKTNCGRSMAIVTGILGTCASSMVVAVIARKLELT 482
Query: 504 R 504
R
Sbjct: 483 R 483
>Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 445 NEFTFWNSMWFSLGSFMQQG-SDITPRSISGRIVGSVWWFFALIVISSYTANLASYLTLT 503
N+ + NS+W +F+ G DI P++ GR + V S A +A L LT
Sbjct: 430 NDINYVNSIWLVAITFLSVGYGDIVPKTNCGRSMAIVTGILGTCASSMVVAVIARKLELT 489
Query: 504 R 504
R
Sbjct: 490 R 490
>Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 29.9 bits (64), Expect = 6.7
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 185 HGDKISRMIKKTELDGLTGSLRFNEEGHRRNFTLQIMELTVD 226
H +K SR+++ T +G+ ++ F EEG+RR Q +E VD
Sbjct: 573 HEEKASRLVRAT--NGIEQAMCFVEEGYRRFAQFQRLEEYVD 612
>Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 29.9 bits (64), Expect = 6.7
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 185 HGDKISRMIKKTELDGLTGSLRFNEEGHRRNFTLQIMELTVD 226
H +K SR+++ T +G+ ++ F EEG+RR Q +E VD
Sbjct: 573 HEEKASRLVRAT--NGIEQAMCFVEEGYRRFAQFQRLEEYVD 612
>Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 29.9 bits (64), Expect = 6.7
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 185 HGDKISRMIKKTELDGLTGSLRFNEEGHRRNFTLQIMELTVD 226
H +K SR+++ T +G+ ++ F EEG+RR Q +E VD
Sbjct: 573 HEEKASRLVRAT--NGIEQAMCFVEEGYRRFAQFQRLEEYVD 612
>Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 29.9 bits (64), Expect = 6.7
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 185 HGDKISRMIKKTELDGLTGSLRFNEEGHRRNFTLQIMELTVD 226
H +K SR+++ T +G+ ++ F EEG+RR Q +E VD
Sbjct: 573 HEEKASRLVRAT--NGIEQAMCFVEEGYRRFAQFQRLEEYVD 612
>Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 29.9 bits (64), Expect = 6.7
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 185 HGDKISRMIKKTELDGLTGSLRFNEEGHRRNFTLQIMELTVD 226
H +K SR+++ T +G+ ++ F EEG+RR Q +E VD
Sbjct: 573 HEEKASRLVRAT--NGIEQAMCFVEEGYRRFAQFQRLEEYVD 612
>AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein.
Length = 1009
Score = 29.9 bits (64), Expect = 6.7
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 185 HGDKISRMIKKTELDGLTGSLRFNEEGHRRNFTLQIMELTVD 226
H +K SR+++ T +G+ ++ F EEG+RR Q +E VD
Sbjct: 573 HEEKASRLVRAT--NGIEQAMCFVEEGYRRFAQFQRLEEYVD 612
>AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl trna
synthetase protein2 protein.
Length = 551
Score = 29.5 bits (63), Expect = 8.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 46 SNKYVVLDSTTQLAKEALILHVRDVRLGRRNYHYFLSG 83
+++++ +D T L ++ L+ V +G RN+ + LSG
Sbjct: 200 ADRFLSIDCTKTLVRDVLVKSVEKRLMGNRNFGFMLSG 237
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.134 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,062,015
Number of Sequences: 27539
Number of extensions: 639092
Number of successful extensions: 1462
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1342
Number of HSP's gapped (non-prelim): 82
length of query: 733
length of database: 12,573,161
effective HSP length: 87
effective length of query: 646
effective length of database: 10,177,268
effective search space: 6574515128
effective search space used: 6574515128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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