Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000644-TA|BGIBMGA000644-PA|undefined
(93 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M97192-1|AAA28575.1| 991|Drosophila melanogaster glutamate rece... 81 1e-16
AE014296-1137|AAF50652.2| 991|Drosophila melanogaster CG8442-PA... 81 1e-16
BT023937-1|ABB36441.1| 968|Drosophila melanogaster RE13936p pro... 80 3e-16
AJ251887-1|CAB64940.1| 1095|Drosophila melanogaster ionotropic g... 80 3e-16
AJ251886-1|CAB64939.1| 1095|Drosophila melanogaster ionotropic g... 80 3e-16
AE014296-1603|AAF50306.2| 1095|Drosophila melanogaster CG4481-PA... 80 3e-16
AY119103-1|AAM50963.1| 853|Drosophila melanogaster RE06730p pro... 26 5.6
AY075552-1|AAL68359.1| 396|Drosophila melanogaster RH55676p pro... 26 5.6
AY059444-1|AAL13350.1| 396|Drosophila melanogaster GH10745p pro... 26 5.6
AE014297-2882|AAF55818.1| 853|Drosophila melanogaster CG3822-PA... 26 5.6
AE014297-1028|AAF54442.1| 396|Drosophila melanogaster CG8417-PA... 26 5.6
AY060776-1|AAL28324.1| 502|Drosophila melanogaster GH23975p pro... 26 7.3
AE014297-2797|AAF55770.1| 502|Drosophila melanogaster CG4288-PB... 26 7.3
AE014297-2796|AAF55771.1| 502|Drosophila melanogaster CG4288-PA... 26 7.3
>M97192-1|AAA28575.1| 991|Drosophila melanogaster glutamate
receptor subunit kainatesubtype protein.
Length = 991
Score = 81.4 bits (192), Expect = 1e-16
Identities = 30/44 (68%), Positives = 42/44 (95%)
Query: 4 QVIPPSSGLIDYAVSMRPDYHRAVIDTITFYGWKNVIYVYDSHD 47
+V+ PSSGL+D+A+SMRPDYH+A+IDTI +YGW+++IY+YDSHD
Sbjct: 136 KVLAPSSGLLDFAISMRPDYHQAIIDTIQYYGWQSIIYLYDSHD 179
>AE014296-1137|AAF50652.2| 991|Drosophila melanogaster CG8442-PA
protein.
Length = 991
Score = 81.4 bits (192), Expect = 1e-16
Identities = 30/44 (68%), Positives = 42/44 (95%)
Query: 4 QVIPPSSGLIDYAVSMRPDYHRAVIDTITFYGWKNVIYVYDSHD 47
+V+ PSSGL+D+A+SMRPDYH+A+IDTI +YGW+++IY+YDSHD
Sbjct: 136 KVLAPSSGLLDFAISMRPDYHQAIIDTIQYYGWQSIIYLYDSHD 179
>BT023937-1|ABB36441.1| 968|Drosophila melanogaster RE13936p
protein.
Length = 968
Score = 80.2 bits (189), Expect = 3e-16
Identities = 30/44 (68%), Positives = 40/44 (90%)
Query: 4 QVIPPSSGLIDYAVSMRPDYHRAVIDTITFYGWKNVIYVYDSHD 47
+V+ PSSG +D+A+SMRPDYH+A+IDTI FYGW+ +IY+YDSHD
Sbjct: 11 KVLTPSSGFLDFALSMRPDYHQAIIDTIQFYGWRKIIYLYDSHD 54
>AJ251887-1|CAB64940.1| 1095|Drosophila melanogaster ionotropic
glutamate receptorsubunit IB protein.
Length = 1095
Score = 80.2 bits (189), Expect = 3e-16
Identities = 30/44 (68%), Positives = 40/44 (90%)
Query: 4 QVIPPSSGLIDYAVSMRPDYHRAVIDTITFYGWKNVIYVYDSHD 47
+V+ PSSG +D+A+SMRPDYH+A+IDTI FYGW+ +IY+YDSHD
Sbjct: 138 KVLTPSSGFLDFALSMRPDYHQAIIDTIQFYGWRKIIYLYDSHD 181
>AJ251886-1|CAB64939.1| 1095|Drosophila melanogaster ionotropic
glutamate receptorsubunit IB protein.
Length = 1095
Score = 80.2 bits (189), Expect = 3e-16
Identities = 30/44 (68%), Positives = 40/44 (90%)
Query: 4 QVIPPSSGLIDYAVSMRPDYHRAVIDTITFYGWKNVIYVYDSHD 47
+V+ PSSG +D+A+SMRPDYH+A+IDTI FYGW+ +IY+YDSHD
Sbjct: 138 KVLTPSSGFLDFALSMRPDYHQAIIDTIQFYGWRKIIYLYDSHD 181
>AE014296-1603|AAF50306.2| 1095|Drosophila melanogaster CG4481-PA
protein.
Length = 1095
Score = 80.2 bits (189), Expect = 3e-16
Identities = 30/44 (68%), Positives = 40/44 (90%)
Query: 4 QVIPPSSGLIDYAVSMRPDYHRAVIDTITFYGWKNVIYVYDSHD 47
+V+ PSSG +D+A+SMRPDYH+A+IDTI FYGW+ +IY+YDSHD
Sbjct: 138 KVLTPSSGFLDFALSMRPDYHQAIIDTIQFYGWRKIIYLYDSHD 181
>AY119103-1|AAM50963.1| 853|Drosophila melanogaster RE06730p
protein.
Length = 853
Score = 26.2 bits (55), Expect = 5.6
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 25 RAVIDTITFYGWKNVIYVYDSHD 47
+A +D + +GWK +Y+++D
Sbjct: 146 KAYVDIVRHWGWKTFTIIYENND 168
>AY075552-1|AAL68359.1| 396|Drosophila melanogaster RH55676p
protein.
Length = 396
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 48 EKYVTQWLLISFASEAVPQYNFAEDDRCSETAAVSIKT 85
E VT+ ++ EA P+ FA+ D C E + I T
Sbjct: 352 EILVTRGSIVYIPVEAAPEIEFAQSDDCDEDFSGYIAT 389
>AY059444-1|AAL13350.1| 396|Drosophila melanogaster GH10745p
protein.
Length = 396
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 48 EKYVTQWLLISFASEAVPQYNFAEDDRCSETAAVSIKT 85
E VT+ ++ EA P+ FA+ D C E + I T
Sbjct: 352 EILVTRGSIVYIPVEAAPEIEFAQSDDCDEDFSGYIAT 389
>AE014297-2882|AAF55818.1| 853|Drosophila melanogaster CG3822-PA
protein.
Length = 853
Score = 26.2 bits (55), Expect = 5.6
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 25 RAVIDTITFYGWKNVIYVYDSHD 47
+A +D + +GWK +Y+++D
Sbjct: 146 KAYVDIVRHWGWKTFTIIYENND 168
>AE014297-1028|AAF54442.1| 396|Drosophila melanogaster CG8417-PA
protein.
Length = 396
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 48 EKYVTQWLLISFASEAVPQYNFAEDDRCSETAAVSIKT 85
E VT+ ++ EA P+ FA+ D C E + I T
Sbjct: 352 EILVTRGSIVYIPVEAAPEIEFAQSDDCDEDFSGYIAT 389
>AY060776-1|AAL28324.1| 502|Drosophila melanogaster GH23975p
protein.
Length = 502
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 32 TFYGWKNVIYVYDSHDEKYVTQWLLISFASEAVPQYNFAED 72
T YGW++V YV+ + + WL+ A + ++ E+
Sbjct: 206 TKYGWESVFYVFGTIGVIWYITWLVFVKAGPELDRFCSKEE 246
>AE014297-2797|AAF55770.1| 502|Drosophila melanogaster CG4288-PB,
isoform B protein.
Length = 502
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 32 TFYGWKNVIYVYDSHDEKYVTQWLLISFASEAVPQYNFAED 72
T YGW++V YV+ + + WL+ A + ++ E+
Sbjct: 206 TKYGWESVFYVFGTIGVIWYITWLVFVKAGPELDRFCSKEE 246
>AE014297-2796|AAF55771.1| 502|Drosophila melanogaster CG4288-PA,
isoform A protein.
Length = 502
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 32 TFYGWKNVIYVYDSHDEKYVTQWLLISFASEAVPQYNFAED 72
T YGW++V YV+ + + WL+ A + ++ E+
Sbjct: 206 TKYGWESVFYVFGTIGVIWYITWLVFVKAGPELDRFCSKEE 246
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.323 0.136 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,483,084
Number of Sequences: 52641
Number of extensions: 140304
Number of successful extensions: 239
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 225
Number of HSP's gapped (non-prelim): 14
length of query: 93
length of database: 24,830,863
effective HSP length: 72
effective length of query: 21
effective length of database: 21,040,711
effective search space: 441854931
effective search space used: 441854931
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 53 (25.4 bits)
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